Literature DB >> 23681002

Promiscuity of a modular polyketide synthase towards natural and non-natural extender units.

Irina Koryakina1, John B McArthur, Matthew M Draelos, Gavin J Williams.   

Abstract

Combinatorial biosynthesis approaches that involve modular type I polyketide synthases (PKSs) are proven strategies for the synthesis of polyketides. In general however, such strategies are usually limited in scope and utility due to the restricted substrate specificity of polyketide biosynthetic machinery. Herein, a panel of chemo-enzymatically synthesized acyl-CoA's was used to probe the promiscuity of a polyketide synthase. Promiscuity determinants were dissected, revealing that the KS is remarkably tolerant to a diverse array of extender units, while the AT likely discriminates between extender units that are native to the producing organism. Our data provides a clear blueprint for future enzyme engineering efforts, and sets the stage for harnessing extender unit promiscuity by employing various in vivo polyketide diversification strategies.

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Year:  2013        PMID: 23681002     DOI: 10.1039/c3ob40633d

Source DB:  PubMed          Journal:  Org Biomol Chem        ISSN: 1477-0520            Impact factor:   3.876


  19 in total

1.  Evaluating nonpolar surface area and liquid chromatography/mass spectrometry response: an application for site occupancy measurements for enzyme intermediates in polyketide biosynthesis.

Authors:  Shan M Randall; Irina Koryakina; Gavin J Williams; David C Muddiman
Journal:  Rapid Commun Mass Spectrom       Date:  2014-12-15       Impact factor: 2.419

2.  Development of a Genetically Encoded Biosensor for Detection of Polyketide Synthase Extender Units in Escherichia coli.

Authors:  Edward Kalkreuter; Aaron M Keeler; Alexandra A Malico; Kyle S Bingham; Anuran K Gayen; Gavin J Williams
Journal:  ACS Synth Biol       Date:  2019-05-28       Impact factor: 5.110

3.  Expanding the structural diversity of polyketides by exploring the cofactor tolerance of an inline methyltransferase domain.

Authors:  Jaclyn M Winter; Grace Chiou; Ian R Bothwell; Wei Xu; Neil K Garg; Minkui Luo; Yi Tang
Journal:  Org Lett       Date:  2013-07-09       Impact factor: 6.005

4.  Natural products: Getting a handle on peptides.

Authors:  Jaclyn M Winter; Yi Tang
Journal:  Nat Chem       Date:  2014-12       Impact factor: 24.427

5.  Engineering the Substrate Specificity of a Modular Polyketide Synthase for Installation of Consecutive Non-Natural Extender Units.

Authors:  Edward Kalkreuter; Jared M CroweTipton; Andrew N Lowell; David H Sherman; Gavin J Williams
Journal:  J Am Chem Soc       Date:  2019-01-24       Impact factor: 15.419

6.  Elucidating the mechanism of fluorinated extender unit loading for improved production of fluorine-containing polyketides.

Authors:  Omer Ad; Benjamin W Thuronyi; Michelle C Y Chang
Journal:  Proc Natl Acad Sci U S A       Date:  2017-01-17       Impact factor: 11.205

7.  The secreted metabolome of Streptomyces chartreusis and implications for bacterial chemistry.

Authors:  Christoph H R Senges; Arwa Al-Dilaimi; Douglas H Marchbank; Daniel Wibberg; Anika Winkler; Brad Haltli; Minou Nowrousian; Jörn Kalinowski; Russell G Kerr; Julia E Bandow
Journal:  Proc Natl Acad Sci U S A       Date:  2018-02-20       Impact factor: 11.205

8.  Expanding the fluorine chemistry of living systems using engineered polyketide synthase pathways.

Authors:  Mark C Walker; Benjamin W Thuronyi; Louise K Charkoudian; Brian Lowry; Chaitan Khosla; Michelle C Y Chang
Journal:  Science       Date:  2013-09-06       Impact factor: 47.728

Review 9.  Engineering polyketide synthases and nonribosomal peptide synthetases.

Authors:  Gavin J Williams
Journal:  Curr Opin Struct Biol       Date:  2013-07-06       Impact factor: 6.809

10.  Inversion of Extender Unit Selectivity in the Erythromycin Polyketide Synthase by Acyltransferase Domain Engineering.

Authors:  Irina Koryakina; Christian Kasey; John B McArthur; Andrew N Lowell; Joseph A Chemler; Shasha Li; Douglas A Hansen; David H Sherman; Gavin J Williams
Journal:  ACS Chem Biol       Date:  2016-11-29       Impact factor: 5.100

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