| Literature DB >> 23675748 |
Anatolie Gavriluta1, Gabriel E Büchel, Leon Freitag, Ghenadie Novitchi, Jean Bernard Tommasino, Erwann Jeanneau, Paul-Steffen Kuhn, Leticia González, Vladimir B Arion, Dominique Luneau.
Abstract
Synthesis and X-ray diffraction structures of cis and trans isomers ofEntities:
Mesh:
Substances:
Year: 2013 PMID: 23675748 PMCID: PMC3673021 DOI: 10.1021/ic4004824
Source DB: PubMed Journal: Inorg Chem ISSN: 0020-1669 Impact factor: 5.165
Scheme 1Compounds Reported in This Work
Atom labeling was introduced for assignment of resonances in NMR spectra.
Crystal Data, Data Collection Parameters, and Structure Refinement Details for (Bu4N)[cis-MCl4(NO)(Hind)] (M = Ru (1); Os (3)) and (Bu4N)[trans-MCl4(NO)(Hind)] (M = Ru (2); Os (4))
| compound | ||||
|---|---|---|---|---|
| empirical formula | C23H42Cl4N4ORu | C23H42Cl4N4ORu | C23H42Cl4N4OOs | C23H42Cl4N4OOs |
| fw | 633.48 | 633.48 | 722.61 | 722.62 |
| space group | ||||
| 12.4091(4) | 10.0975(5) | 12.35414(12) | 10.0836(7) | |
| 52.5720(15) | 15.8422(9) | 52.4121(4) | 15.8530(10) | |
| 13.7339(4) | 18.9705(10) | 13.87637(13) | 18.9740(10) | |
| α [deg] | ||||
| β [deg] | 100.7330(10) | 100.759(2) | 100.7569(9) | 101.298(7) |
| γ [deg] | ||||
| 8802.9(5) | 2981.3(3) | 8827.14(14) | 2974.3(3) | |
| 12 | 4 | 12 | 4 | |
| λ [Å] | 0.70713 | 0.71073 | 1.54184 | 0.71070 |
| ρcalcd [g cm–3] | 1.434 | 1.411 | 1.631 | 1.614 |
| cryst size [mm3] | 0.14 × 0.14 × 0.10 | 0.15 × 0.02 × 0.02 | 0.27 × 0.17 × 0.14 | 0.57 × 0.29 × 0.15 |
| 150(2) | 150(2) | 100(2) | 100(2) | |
| μ [mm–1] | 0.921 | 0.906 | 11.698 | 4.668 |
| 0.0715 | 0.0310 | 0.0316 | 0.0304 | |
| 0.1288 | 0.0641 | 0.0860 | 0.0697 | |
| GOF | 1.064 | 1.025 | 1.042 | 1.033 |
R1 = ∑∥Fo| – |Fc∥/∑|Fo|.
wR2 = {∑[w(Fo2 – Fc2)2]/∑[w(Fo2)2]}1/2.
GOF = {∑[w(Fo2 – Fc2)2]/(n – p)}1/2, where n is the number of reflections and p is the total number of parameters refined.
Selected Bond Lengths (Å) and Angles (deg) (experimental and calculated) for Compounds cis-(Bu4N)[MCl4(NO)(Hind)] (M = Ru (1), Os (3)) and trans-(Bu4N)[MCl4(NO)(Hind)] (M = Ru (2), Os (4))
| X-ray | B3LYP/6-31G* | |||||||
|---|---|---|---|---|---|---|---|---|
| bond | ||||||||
| M–N1 | 2.092(4) | 2.104(2) | 2.080(4) | 2.114(3) | 2.151 | 2.204 | 2.161 | 2.182 |
| M–Cleq(av) | 2.350(19) | 2.360(3) | 2.373(9) | 2.368(3) | 2.469 | 2.451 | 2.406 | 2.438 |
| M–Clax | 2.3675(13) | 2.3728(11) | 2.405 | 2.390 | ||||
| M–N3 | 1.784(5) | 1.717(2) | 1.8220(9) | 1.763(3) | 1.747 | 1.735 | 1.732 | 1.715 |
| N3–O1 | 1.041(6) | 1.144(3) | 1.1346(12) | 1.133(4) | 1.171 | 1.167 | 1.161 | 1.157 |
| M–N3–O1 | 176.1(5) | 178.2(2) | 176.4(4) | 178.0(4) | 178.7 | 179.7 | 179.5 | 179.8 |
Quoted parameters refer to crystallographically independent complex anions not affected by the disorder.
Figure 1ORTEP views of the [cis-RuCl4(NO)(Hind)]−, [trans-RuCl4((NO)(Hind)]−, cis-[OsCl4(NO)(Hind)]−, and trans-[OsCl4(NO)(Hind)]− complex anions in 1–4 (from left to right). Thermal ellipsoids are drawn at the 50% probability level.
Figure 2Selected region of 1H NMR (500 MHz; 25 °C) spectra of (n-Bu4N)[cis-MCl4(NO)(Hind)] (M = Ru (1), Os (3)) and (n-Bu4N)[trans-MCl4(NO)(Hind)] (M = Ru (2), Os (4)) in C2D2Cl4.
Figure 3Evolution of 1H NMR spectra (500 MHz) in the NH region of the [trans-RuCl4(NO)(Hind)]− (a) and [cis-RuCl4(NO)(Hind)]− (b) isomers as a function of time (τ = [0–3] × 105 s) at 100 °C in C2D2Cl4 (C0(trans) = 14.5 mmol/L; C0(cis) = 13.7 mmol/L) showing the formation of the cis and trans isomers, respectively.
Figure 4Evolution of 1H NMR spectra (300 MHz) of the [trans-OsCl4(NO)(Hind)]− isomer in the NH region as a function of time (τ = [0–3] × 105 s) at 120 °C in C2D2Cl4 (C0 = 15.26 mmol/L) showing the formation of the cis isomer (for complete aromatic region spectrum, see Supporting Information Figure S5).
Figure 5Time evolution of populations for [cis-RuCl4(NO)(Hind)]− (○) and [trans-RuCl4(NO)(Hind)]− (□) isomers at 100 °C in C2D2Cl4 for cis to trans [c–t] (blue) and trans to cis [t–c] (red) isomerization processes. The solid lines are the best fits with activation parameters indicated in the text (for fitted plots at 90, 105, and 110 °C, see Supporting Information Figures S6 and S7).
Figure 6Time evolution of populations for [cis-OsCl4(NO)(Hind)]− (○) and [trans-OsCl4(NO)(Hind)]− (□) isomers at 120 and 130 °C in C2D2Cl4 for trans to cis [t–c] isomerization processes. The solid lines are the best fits with activation parameters indicated in the text (see also Figure S8 in the Supporting Information).
Rate Constants k (s–1) with Standard Deviations in Parentheses and Equilibrium Constant K at Different Temperatures for the Isomerization Reactions of [cis-MCl4(NO)(Hind)]− (M = Ru (1), Os (3)) and [trans-MCl4(NO)(Hind)]− (M = Ru (2), Os(4)) in C2D2Cl4
| process | ||||||||
|---|---|---|---|---|---|---|---|---|
| [ | 0.58(8) | 1.78(2) | 5.51(6) | 8.3(1) | 20.1(7) | |||
| [ | 1.05(6) | 2.66(3) | 12.2(1) | 19.5(2) | 50.1(5) | |||
| [RuCl4(NO)(Hind)]− | 0.55 | 0.57 | 0.45 | 0.42 | 0.40 | |||
| 0.04(1) | 0.08(1) | 0.6(1) | 2.3(2) | |||||
| 1.26(1) | 2.68(2) | 11.4(1) | 36.6(7) | |||||
| [OsCl4(NO)(Hind)]− | 0.03 | 0.03 | 0.05 | 0.06 |
The kinetic parameters were obtained from reversible first order law analysis of trans to cis conversion data of trans-[OsCl4(NO)(Hind)]− (4).
Activation Parameters (Δ‡, Δ‡, ΔG‡) for the isomerization of [cis-MCl4(NO)(Hind)]− (M = Ru (1), Os(3)) and [trans-MCl4(NO)(Hind)]− (M = Ru (2), Os(4)) in C2D2Cl4a
| Δ | Δ | Δ | Δ | ||||
|---|---|---|---|---|---|---|---|
| compound | process | method | method | method | method | method | method |
| [ | 124.1 ± 0.3 | 122.8 ± 1.3 | –14.9 ± 0.7 | –18.7 ± 3.6 | 128.5 | 129.8 | |
| [ | 143.7 ± 0.5 | 138.8 ± 1.0 | 28.5 ± 1.4 | 31.0 ± 2.7 | 135.2 | 132.8 | |
| [ | 200.7 ± 0.7 | 142.7 ± 8.9 | 161.7 | 146.0 | |||
| [ | 168.2 ± 0.6 | 85.4 ± 3.9 | 144.9 | 135.5 | |||
Estimation from method I by fitting k1 and k–1 by Eyring equation (eq 5) and by method II, simultaneously fitting the all population ratios at different temperatures via eqs 3 and 4 with constraining eq 5.
The kinetic parameters were obtained from reversible first order law analysis of trans to cis conversion data of 4.
Figure 7Eyring plots for the isomerization reactions of [MCl4(NO)(Hind)]−trans to cis (in red) (M = Ru (2) (Δ), Os (4) (○)) and cis to trans (in blue) (M = Ru (1) (◊), Os (3) (□)) in C2D2Cl4. The solid lines are the best fits with activation parameters quoted in Table 4.
Figure 8Cyclic voltammetry of [cis-OsCl4(NO)(Hind)]− (red), [trans-OsCl4(NO)(Hind)]− (blue), and their mixture (green) at 100 mV/s on GC electrode (3 mm) in 0.1 M TBAPF6 in CH3CN (see also Figure S17).
Scheme 2cis–trans Isomerization Reactions (Red Outline) Associated with the Redox Processes (Black Outline)
Experimental and Scaled NO Stretching Vibrations (in cm–1) at the B3LYP/6-31G* Level of Theory
| complex | ||||
|---|---|---|---|---|
| calculated | 1863 | 1892 | 1829 | 1860 |
| experimental | 1846 | 1875 | 1805 | 1838 |
Figure 9Schematic representation of three cis–trans isomerization mechanisms investigated for [RuCl4(NO)(Hind)]−: dissociative (A), associative (B), and twist (C). The involved transition states and the reaction intermediates are shown, together with the most relevant geometrical parameters (in Å and degrees) obtained at the B3LYP/6-31G* level of theory in the gas phase. The relative energies are calculated at the PCM-B2GP-PLYP/6-311G*//B3LYP/6-31G* level of theory. The labels cis-ts, ts, and trans-ts refer to transition states, while cis-min and trans-min are intermediates. For a better illustration of the twist mechanism (c), the letters a, b, and c mark the NO–Cl–Cl triangle. Upon the isomerization, the triangle rotates around the ruthenium atom, as shown in the figure.
Electronic Energies (in kJ/mol, Relative to the trans Compound 2 for cis (1) and trans (2) Minima), Transition States and Associated Intermediates Calculated at Different Levels of Theory
| (A)
dissociative mechanism | (B) associative | (C) twist | |||||||
|---|---|---|---|---|---|---|---|---|---|
| method | |||||||||
| B3LYPgas | 15.28 | 96.03 | 91.29 | 92.12 | 72.85 | 86.6 | 0 | 139.19 | 193 |
| B3LYPsol | –3.94 | 111.99 | 107.65 | 125.3 | 90.56 | 94.82 | 0 | 140.47 | 189.09 |
| B2GP-PLYPgas | 27.61 | 118.38 | 109.04 | 112.08 | 87.02 | 105.99 | 0 | 163.68 | 192.58 |
| B2GP-LYPsol | 0.8 | 124.65 | 114.19 | 140.45 | 95.52 | 103.61 | 0 | 158.56 | 199.43 |
| Δ | 16.0 | 138.8 | 0 | 138.8 | 138.8 | ||||
B3LYP/6-31G*.
PCM-B3LYP/6-311G*//B3LYP/6-31G*.
B2GP-PLYP/6-311G*//B3LYP/6-31G*.
PCM-B2GP-PLYP/6-311G*//B3LYP/6-31G*.
Activation enthalpy is obtained without explicit considerations of a particular transition state.