Literature DB >> 23674599

Polar auxin transport: models and mechanisms.

Klaartje van Berkel1, Rob J de Boer, Ben Scheres, Kirsten ten Tusscher.   

Abstract

Spatial patterns of the hormone auxin are important drivers of plant development. The observed feedback between the active, directed transport that generates auxin patterns and the auxin distribution that influences transport orientation has rendered this a popular subject for modelling studies. Here we propose a new mathematical framework for the analysis of polar auxin transport and present a detailed mathematical analysis of published models. We show that most models allow for self-organised patterning for similar biological assumptions, and find that the pattern generated is typically unidirectional, unless additional assumptions or mechanisms are incorporated. Our analysis thus suggests that current models cannot explain the bidirectional fountain-type patterns found in plant meristems in a fully self-organised manner, and we discuss future research directions to address the gaps in our understanding of auxin transport mechanisms.

Keywords:  Computer simulation; Mathematical biology; Plant hormone

Mesh:

Substances:

Year:  2013        PMID: 23674599     DOI: 10.1242/dev.079111

Source DB:  PubMed          Journal:  Development        ISSN: 0950-1991            Impact factor:   6.868


  38 in total

1.  Localized auxin peaks in concentration-based transport models of the shoot apical meristem.

Authors:  Delphine Draelants; Daniele Avitabile; Wim Vanroose
Journal:  J R Soc Interface       Date:  2015-05-06       Impact factor: 4.118

2.  Modelling the emergence of polarity patterns for the intercellular transport of auxin in plants.

Authors:  Silvia Grigolon; Peter Sollich; Olivier C Martin
Journal:  J R Soc Interface       Date:  2015-05-06       Impact factor: 4.118

3.  Bimodal regulation of ICR1 levels generates self-organizing auxin distribution.

Authors:  Ora Hazak; Uri Obolski; Tomáš Prat; Jiří Friml; Lilach Hadany; Shaul Yalovsky
Journal:  Proc Natl Acad Sci U S A       Date:  2014-12-02       Impact factor: 11.205

Review 4.  The yin-yang of hormones: cytokinin and auxin interactions in plant development.

Authors:  G Eric Schaller; Anthony Bishopp; Joseph J Kieber
Journal:  Plant Cell       Date:  2015-01-20       Impact factor: 11.277

5.  Self-organization of plant vascular systems: claims and counter-claims about the flux-based auxin transport model.

Authors:  Chrystel Feller; Etienne Farcot; Christian Mazza
Journal:  PLoS One       Date:  2015-03-03       Impact factor: 3.240

6.  GA(3) enhances root responsiveness to exogenous IAA by modulating auxin transport and signalling in Arabidopsis.

Authors:  Guijun Li; Changhua Zhu; Lijun Gan; Denny Ng; Kai Xia
Journal:  Plant Cell Rep       Date:  2014-12-25       Impact factor: 4.570

Review 7.  Cell polarity in plants: the Yin and Yang of cellular functions.

Authors:  Jiyan Qi; Thomas Greb
Journal:  Curr Opin Plant Biol       Date:  2016-12-03       Impact factor: 7.834

Review 8.  Auxin regulation of cell polarity in plants.

Authors:  Xue Pan; Jisheng Chen; Zhenbiao Yang
Journal:  Curr Opin Plant Biol       Date:  2015-11-19       Impact factor: 7.834

9.  Temporal integration of auxin information for the regulation of patterning.

Authors:  Carlos S Galvan-Ampudia; Guillaume Cerutti; Jonathan Legrand; Géraldine Brunoud; Raquel Martin-Arevalillo; Romain Azais; Vincent Bayle; Steven Moussu; Christian Wenzl; Yvon Jaillais; Jan U Lohmann; Christophe Godin; Teva Vernoux
Journal:  Elife       Date:  2020-05-07       Impact factor: 8.140

10.  Local auxin metabolism regulates environment-induced hypocotyl elongation.

Authors:  Zuyu Zheng; Yongxia Guo; Ondřej Novák; William Chen; Karin Ljung; Joseph P Noel; Joanne Chory
Journal:  Nat Plants       Date:  2016-03-21       Impact factor: 15.793

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