Literature DB >> 23672618

Structural insights into proteasome activation by the 19S regulatory particle.

Aaron Ehlinger1, Kylie J Walters.   

Abstract

Since its discovery in the late 1970s, the ubiquitin-proteasome system (UPS) has become recognized as the major pathway for regulated cellular proteolysis. Processes such as cell cycle control, pathogen resistance, and protein quality control rely on selective protein degradation at the proteasome for homeostatic function. Perhaps as a consequence of the importance of this pathway, and the genesis of severe diseases upon its dysregulation, protein degradation by the UPS is highly controlled from the level of substrate recognition to proteolysis. Technological advances over the past decade have created an explosion of structural and mechanistic information that has underscored the complexity of the proteasome and its upstream regulatory factors. Significant insights have come from the study of the 19S proteasome regulatory particle (RP) responsible for recognition and processing of ubiquitinated substrates destined for proteolysis. Established as a highly dynamic proteasome activator, the RP has a large number of both permanent and transient components with specialized functional roles that are critical for proteasome function. In this review, we highlight recent mechanistic developments in the study of proteasome activation by the RP and how they provide context to our current understanding of the UPS.

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Year:  2013        PMID: 23672618      PMCID: PMC3864829          DOI: 10.1021/bi400417a

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  158 in total

1.  A proteasomal ATPase subunit recognizes the polyubiquitin degradation signal.

Authors:  Y Amy Lam; T Glen Lawson; Murugesan Velayutham; Jay L Zweier; Cecile M Pickart
Journal:  Nature       Date:  2002-04-18       Impact factor: 49.962

2.  What curves alpha-solenoids? Evidence for an alpha-helical toroid structure of Rpn1 and Rpn2 proteins of the 26 S proteasome.

Authors:  Andrey V Kajava
Journal:  J Biol Chem       Date:  2002-09-20       Impact factor: 5.157

3.  The proteasome antechamber maintains substrates in an unfolded state.

Authors:  Amy M Ruschak; Tomasz L Religa; Sarah Breuer; Susanne Witt; Lewis E Kay
Journal:  Nature       Date:  2010-10-14       Impact factor: 49.962

4.  Mass spectrometric characterization of the affinity-purified human 26S proteasome complex.

Authors:  Xiaorong Wang; Chi-Fen Chen; Peter R Baker; Phang-lang Chen; Peter Kaiser; Lan Huang
Journal:  Biochemistry       Date:  2007-02-27       Impact factor: 3.162

5.  Structural basis for the recognition between the regulatory particles Nas6 and Rpt3 of the yeast 26S proteasome.

Authors:  Yoshihiro Nakamura; Takashi Umehara; Akiko Tanaka; Masami Horikoshi; Balasundaram Padmanabhan; Shigeyuki Yokoyama
Journal:  Biochem Biophys Res Commun       Date:  2007-05-29       Impact factor: 3.575

6.  Structure of a proteasome Pba1-Pba2 complex: implications for proteasome assembly, activation, and biological function.

Authors:  Beth M Stadtmueller; Erik Kish-Trier; Katherine Ferrell; Charisse N Petersen; Howard Robinson; David G Myszka; Debra M Eckert; Tim Formosa; Christopher P Hill
Journal:  J Biol Chem       Date:  2012-08-28       Impact factor: 5.157

7.  hRpn13/ADRM1/GP110 is a novel proteasome subunit that binds the deubiquitinating enzyme, UCH37.

Authors:  Xiao-Bo Qiu; Song-Ying Ouyang; Chao-Jun Li; Shiying Miao; Linfang Wang; Alfred L Goldberg
Journal:  EMBO J       Date:  2006-11-30       Impact factor: 11.598

8.  Rad23 ubiquitin-associated domains (UBA) inhibit 26 S proteasome-catalyzed proteolysis by sequestering lysine 48-linked polyubiquitin chains.

Authors:  Shahri Raasi; Cecile M Pickart
Journal:  J Biol Chem       Date:  2003-03-14       Impact factor: 5.157

Review 9.  Recognition and processing of ubiquitin-protein conjugates by the proteasome.

Authors:  Daniel Finley
Journal:  Annu Rev Biochem       Date:  2009       Impact factor: 23.643

10.  Purification and characterization of a protein inhibitor of the 20S proteasome (macropain).

Authors:  M Chu-Ping; C A Slaughter; G N DeMartino
Journal:  Biochim Biophys Acta       Date:  1992-03-12
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  24 in total

1.  An Extended Conformation for K48 Ubiquitin Chains Revealed by the hRpn2:Rpn13:K48-Diubiquitin Structure.

Authors:  Xiuxiu Lu; Danielle L Ebelle; Hiroshi Matsuo; Kylie J Walters
Journal:  Structure       Date:  2020-03-10       Impact factor: 5.006

Review 2.  Proteasome Activation as a New Therapeutic Approach To Target Proteotoxic Disorders.

Authors:  Evert Njomen; Jetze J Tepe
Journal:  J Med Chem       Date:  2019-03-14       Impact factor: 7.446

3.  Impact of Losing hRpn13 Pru or UCHL5 on Proteasome Clearance of Ubiquitinated Proteins and RA190 Cytotoxicity.

Authors:  Vasty Osei-Amponsa; Vinidhra Sridharan; Mayank Tandon; Christine N Evans; Kimberly Klarmann; Kwong Tai Cheng; Justin Lack; Raj Chari; Kylie J Walters
Journal:  Mol Cell Biol       Date:  2020-08-28       Impact factor: 4.272

4.  The Proteasome Ubiquitin Receptor hRpn13 and Its Interacting Deubiquitinating Enzyme Uch37 Are Required for Proper Cell Cycle Progression.

Authors:  Leah Randles; Ravi K Anchoori; Richard B S Roden; Kylie J Walters
Journal:  J Biol Chem       Date:  2016-02-23       Impact factor: 5.157

5.  Sequential actions of the AAA-ATPase valosin-containing protein (VCP)/p97 and the proteasome 19 S regulatory particle in sterol-accelerated, endoplasmic reticulum (ER)-associated degradation of 3-hydroxy-3-methylglutaryl-coenzyme A reductase.

Authors:  Lindsey L Morris; Isamu Z Hartman; Dong-Jae Jun; Joachim Seemann; Russell A DeBose-Boyd
Journal:  J Biol Chem       Date:  2014-05-24       Impact factor: 5.157

Review 6.  Regulation of cardiac proteasomes by ubiquitination, SUMOylation, and beyond.

Authors:  Ziyou Cui; Sarah B Scruggs; Jennifer E Gilda; Peipei Ping; Aldrin V Gomes
Journal:  J Mol Cell Cardiol       Date:  2013-10-17       Impact factor: 5.000

7.  Structure of hRpn10 Bound to UBQLN2 UBL Illustrates Basis for Complementarity between Shuttle Factors and Substrates at the Proteasome.

Authors:  Xiang Chen; Danielle L Ebelle; Brandon J Wright; Vinidhra Sridharan; Evan Hooper; Kylie J Walters
Journal:  J Mol Biol       Date:  2019-01-18       Impact factor: 5.469

8.  Cryo-EM Reveals Unanchored M1-Ubiquitin Chain Binding at hRpn11 of the 26S Proteasome.

Authors:  Xiang Chen; Zachary Dorris; Dan Shi; Rick K Huang; Htet Khant; Tara Fox; Natalia de Val; Dewight Williams; Ping Zhang; Kylie J Walters
Journal:  Structure       Date:  2020-08-11       Impact factor: 5.006

9.  Solid-Phase Synthesis and Application of a Clickable Version of Epoxomicin for Proteasome Activity Analysis.

Authors:  Andres F Salazar-Chaparro; Saayak Halder; Marianne E Maresh; Darci J Trader
Journal:  Chembiochem       Date:  2022-02-21       Impact factor: 3.461

10.  Myosin VI Contains a Compact Structural Motif that Binds to Ubiquitin Chains.

Authors:  Fahu He; Hans-Peter Wollscheid; Urszula Nowicka; Matteo Biancospino; Eleonora Valentini; Aaron Ehlinger; Filippo Acconcia; Elisa Magistrati; Simona Polo; Kylie J Walters
Journal:  Cell Rep       Date:  2016-03-10       Impact factor: 9.423

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