Literature DB >> 23670104

Photo-CIDNP NMR spectroscopy of amino acids and proteins.

Lars T Kuhn1.   

Abstract

Photo-chemically induced dynamic nuclear polarization (CIDNP) is a nuclear magnetic resonance (NMR) phenomenon which, among other things, is exploited to extract information on biomolecular structure via probing solvent-accessibilities of tryptophan (Trp), tyrosine (Tyr), and histidine (His) amino acid side chains both in polypeptides and proteins in solution. The effect, normally triggered by a (laser) light-induced photochemical reaction in situ, yields both positive and/or negative signal enhancements in the resulting NMR spectra which reflect the solvent exposure of these residues both in equilibrium and during structural transformations in "real time". As such, the method can offer - qualitatively and, to a certain extent, quantitatively - residue-specific structural and kinetic information on both the native and, in particular, the non-native states of proteins which, often, is not readily available from more routine NMR techniques. In this review, basic experimental procedures of the photo-CIDNP technique as applied to amino acids and proteins are discussed, recent improvements to the method highlighted, and future perspectives presented. First, the basic principles of the phenomenon based on the theory of the radical pair mechanism (RPM) are outlined. Second, a description of standard photo-CIDNP applications is given and it is shown how the effect can be exploited to extract residue-specific structural information on the conformational space sampled by unfolded or partially folded proteins on their "path" to the natively folded form. Last, recent methodological advances in the field are highlighted, modern applications of photo-CIDNP in the context of biological NMR evaluated, and an outlook into future perspectives of the method is given.

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Year:  2013        PMID: 23670104     DOI: 10.1007/128_2013_427

Source DB:  PubMed          Journal:  Top Curr Chem        ISSN: 0340-1022


  6 in total

Review 1.  Sensitivity enhancement in solution NMR: emerging ideas and new frontiers.

Authors:  Jung Ho Lee; Yusuke Okuno; Silvia Cavagnero
Journal:  J Magn Reson       Date:  2014-04       Impact factor: 2.229

2.  Improved sensitivity of laser-enhanced 1Hα-13Cα-correlation via suppression of Cα-C' scalar-coupling evolution.

Authors:  Hanming Yang; Silvia Cavagnero
Journal:  J Magn Reson       Date:  2019-08-13       Impact factor: 2.229

3.  Effect of heavy atoms on photochemically induced dynamic nuclear polarization in liquids.

Authors:  Yusuke Okuno; Silvia Cavagnero
Journal:  J Magn Reson       Date:  2017-12-05       Impact factor: 2.229

Review 4.  Advancing homogeneous catalysis for parahydrogen-derived hyperpolarisation and its NMR applications.

Authors:  Ben J Tickner; Vladimir V Zhivonitko
Journal:  Chem Sci       Date:  2022-03-22       Impact factor: 9.969

Review 5.  In-Cell NMR: Analysis of Protein-Small Molecule Interactions, Metabolic Processes, and Protein Phosphorylation.

Authors:  Amit Kumar; Lars T Kuhn; Jochen Balbach
Journal:  Int J Mol Sci       Date:  2019-01-17       Impact factor: 5.923

6.  Insights Into the Micelle-Induced β-Hairpin-to-α-Helix Transition of a LytA-Derived Peptide by Photo-CIDNP Spectroscopy.

Authors:  M Victoria Gomez; Margarita Ruiz-Castañeda; Philipp Nitschke; Ruth M Gschwind; M Angeles Jiménez
Journal:  Int J Mol Sci       Date:  2021-06-22       Impact factor: 5.923

  6 in total

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