| Literature DB >> 23665957 |
Ana Martins1, Tania Tenreiro, Gonçalo Andrade, Mário Gadanho, Sandra Chaves, Marta Abrantes, Patrícia Calado, Rogério Tenreiro, Helena Vieira.
Abstract
Interesting biological activities have been found for numerous marine compounds. In fact, screening of phylogenetically diverse marine microorganisms from extreme environments revealed to be a rational approach for the discovery of novel molecules with relevant bioactivities for industries such as pharmaceutical and cosmeceutical. Nevertheless, marine sources deliverables are still far from the expectations and new extreme sources of microbes should be explored. In this work, a marine prokaryotic collection from four Mid-Atlantic Ridge (MAR) deep sea hydrothermal vents near the Azores Islands, Portugal, was created, characterized and tested for its photoprotective capacity. Within 246 isolates, a polyphasic approach, using chemotaxonomic and molecular typing methods, identified 23-related clusters of phenetically similar isolates with high indexes of diversity. Interestingly, 16S rRNA gene sequencing suggested the presence of 43% new prokaryotic species. A sub-set of 139 isolates of the prokaryotic collection was selected for biotechnological exploitation with 484 bacterial extracts prepared in a sustainable upscalling manner. 22% of the extracts showed an industrially relevant photoprotective activity, with two extracts, belonging to new strains of the species Shewanella algae and Vibrio fluvialis, uniquely showing UV-A, UV-B and UV-C protective capacity. This clearly demonstrates the high potential of the bacteria MAR vents collection in natural product synthesis with market applications.Entities:
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Year: 2013 PMID: 23665957 PMCID: PMC3707158 DOI: 10.3390/md11051506
Source DB: PubMed Journal: Mar Drugs ISSN: 1660-3397 Impact factor: 5.118
Figure 1Portuguese mission SEAHMA-1 in MAR (Mid-Atlantic Ridge). (a) Localization and images of five hydrothermal vents visited during the missions: Rainbow, Mount Saldanha, Lucky Strike and Menez Gwen; (b) Images of the ship L’Atlante and of the ROV (Remote operating vehicle) Victor 6000 used in the expedition.
Distribution of the MAR vents isolates in each phenotypic operational group according to the type of sample (a) and hydrothermal vent (b) from which they were collected.
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| Water | Animals | Sediments | Chimneys | Total | ||
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| 18 | 87 | 24 | 11 |
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| 11 | 56 | 44 | 14 |
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| 0 | 3 | 0 | 21 |
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| 57 | 32 | 3 | 48 |
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| 82 | 15 | 0 | 28 |
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| 1 | 11 | 0 | 12 |
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Figure 2Consensus polyphasic dendrograms from the in silico analysis of the PCR fingerprinting profiles (primers csM13, pH and 1281) and whole-cell protein profiles obtained for Group III (a); Group II (b) and Group I (c). Cophenetic correlation coefficient, ρ=0.91.
Distribution of the isolates of each one of the 23 identified clusters according to the type of sample (a) and hydrothermal vent (b) from which they were collected.
| Type of sample | |||||
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| Group | Cluster | Water | Animals | Sediments | Chimneys |
| 1 | 11 | 1 | 3 | ||
| 1 | 16 | 2 | |||
| 9 | 1 | 2 | |||
| 21 | 11 | ||||
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| 4 | 3 | 23 | 4 | ||
| 3 | 18 | 1 | |||
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| 3 | 2 | 11 | |||
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MAR vents biotech collection. MAR vents collection is composed of marine bacteria isolated from different types of samples and from the different hydrothermal fields.
| Marine Strain | Vent | Type of sample | Depth (m) | T (°C) |
|---|---|---|---|---|
| MG BA 001 to 006 | Menez Gwen |
| 825 | 8.4 |
| MG MS 007 to 012 | 825 | 8.2 | ||
| MG GA 013 to 016 | Gastropode | 825 | 8.4 | |
| MG SA 017 and 018 | Sediment A | 825 | 8.7 | |
| MG CR 019 to 023 | Crab | 825 | 8.2 | |
| MG SC 024 to 036 | Sediment C | 869 | 8.3 | |
| RB RS 037 to 043 | Rainbow | 2296 | 3.7 | |
| RB PS 045 to 050 | 2297 | 3.7 | ||
| RB BA 051 to 062 |
| 2290 | 3.8 | |
| LS BA 063 to 069 | Lucky Strike |
| 1693 | 4.4 |
| LS WA 070 to 081 | Water | 1728 | 4.3 | |
| MG SD 082 | Menez Gwen | Sediment D | 808 | 9.1 |
| MG SA 083 | Sediment A | 825 | 8.7 | |
| MG MS 098O2 | 825 | 8.2 | ||
| RB BA 124O2, 125O2, 127O2, 128O2 and 131O2 | Rainbow |
| 2290 | 3.8 |
| LS BA 136O2, 137O2, 138O2, 139O2 and 146O2 | Lucky Strike |
| 1693 | 4.4 |
| MG MS 168O2 and 184O2 | Menez Gwen | 825 | 8.2 | |
| MG CR 184O2, 185O2 and 186O2 | Crab | 825 | 8.2 | |
| MG CC 194O2 | Chimney C | 808 | 266.2 | |
| MG CB 195O2 and 196O2 | Chimney B | 865 | 266.2 | |
| RB WC 199O2, 200O2, 201O2 and 202O2 | Rainbow | Water | 2301 | 3.7 |
| MG CR 203O2 and 209O2 | Menez Gwen | Crab | 825 | 8.2 |
| MG CB 210O2 and 211O2 | Chimney B | 865 | 266.2 | |
| MG CC 212O2 and 213O2 | Chimney C | 808 | 266.2 | |
| LS CA 214O2 | Lucky Strike | Chimney A | 1728 | 231.3 |
| RB BA 215O2, 216O2 , 217O2, 218O2 and 219O2 | Rainbow |
| 2290 | 3.8 |
| RB WC 220O2 and 221O2 | Water | 2301 | 3.7 | |
| LS BA 225O2 and 226O2 | Lucky Strike |
| 1693 | 4.4 |
| LS CA 227O2 and 228O2 | Chimney A | 1728 | 231.3 | |
| LS SD 230O2, 231O2 and 232O2 | Sediment D | 1691 | 4.3 | |
| MG CC 235O2 | Menez Gwen | Chimney C | 808 | 266.2 |
| MG MS 240O2 and 241O2 | 825 | 8.2 | ||
| RB RS 247O2, 248O2, 249O2, 250O2,251O2, 252O2 and 253O2 | Rainbow | 2296 | 3.7 | |
| MG SD 258O2, 259O2 and 260O2 | Mount Saldanha | Sediment D | 2200 | 3.8 |
Figure 3Anti-UV platform and extracts screening. (a) Results for yeast cell growth obtained after 3 days incubation at 30 °C of 3 plate sets: following non-irradiation and following either UV-A (365 nm), UV-B (312 nm) or UV-C (255 nm) lethal dose irradiation without or with the addition of a 2 to 4 µL drop of natural extracts from MGMS241O2 and RBRS251O2 isolates and also of a DMSO control; (b) UV-VIS spectra of natural extracts from MGMS241O2 and RBRS251O2 isolates and also of a DMSO control.
Figure 4Phylogenetic tree (Bayesian MCMC method) obtained with 16S rRNA sequences (1250 nucleotide positions), corresponding to the sequences determined in this work, the most closely related ones retrieved from BLAST search and representatives of Vibrio and Shewanella genera. Escherichia coli was included to root the tree. Numbers associated to each node refer to probability values. Access numbers of GenBank sequences are indicated and names in bold face correspond to sequences determined in this work. T: type strain.