Literature DB >> 23664057

Generation of functional antibodies for mammalian membrane protein crystallography.

Tomoya Hino1, So Iwata, Takeshi Murata.   

Abstract

Membrane proteins act as gateways to cells, and they are responsible for much of the communication between cells and their environments. Crystallography of membrane proteins is often limited by the difficulty of crystallization in detergent micelles. Co-crystallization with antibody fragments has been reported as a method to facilitate the crystallization of membrane proteins; however, it is widely known that the generation of mouse monoclonal antibodies that recognize the conformational epitopes of mammalian integral membrane proteins is typically difficult. Here, we present our protocols to generate functional mouse antibodies for the membrane protein crystallography, which have enabled us to solve crystal structures of mammalian receptors and transporters complexed with antibody fragments.
Copyright © 2013 Elsevier Ltd. All rights reserved.

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Year:  2013        PMID: 23664057     DOI: 10.1016/j.sbi.2013.04.007

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  15 in total

1.  Proteoliposome-based selection of a recombinant antibody fragment against the human M2 muscarinic acetylcholine receptor.

Authors:  Yayoi Nomura; Takatoshi Arakawa; Tomoya Hino; Hitomi Abe; Yoshiko Nakada-Nakura; Yumi Sato; Hiroko Iwanari; Mitsunori Shiroishi; Hidetsugu Asada; Tatsuro Shimamura; Takeshi Murata; Takuya Kobayashi; Takao Hamakubo; So Iwata; Norimichi Nomura
Journal:  Monoclon Antib Immunodiagn Immunother       Date:  2014-12

2.  Application of the NZ-1 Fab as a crystallization chaperone for PA tag-inserted target proteins.

Authors:  Risako Tamura; Rika Oi; Satoko Akashi; Mika K Kaneko; Yukinari Kato; Terukazu Nogi
Journal:  Protein Sci       Date:  2019-02-04       Impact factor: 6.725

3.  The intervening removable affinity tag (iRAT) production system facilitates Fv antibody fragment-mediated crystallography.

Authors:  Yayoi Nomura; Yumi Sato; Ryoji Suno; Shoichiro Horita; So Iwata; Norimichi Nomura
Journal:  Protein Sci       Date:  2016-09-14       Impact factor: 6.725

4.  The multidrug-resistance transporter MdfA from Escherichia coli: crystallization and X-ray diffraction analysis.

Authors:  Kumar Nagarathinam; Frank Jaenecke; Yoshiko Nakada-Nakura; Yunhon Hotta; Kehong Liu; So Iwata; Milton T Stubbs; Norimichi Nomura; Mikio Tanabe
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2017-06-20       Impact factor: 1.056

5.  Monoclonal anti-β1-adrenergic receptor antibodies activate G protein signaling in the absence of β-arrestin recruitment.

Authors:  Catherine J Hutchings; Gabriella Cseke; Greg Osborne; Jeanette Woolard; Andrei Zhukov; Markus Koglin; Ali Jazayeri; Jahnavi Pandya-Pathak; Christopher J Langmead; Stephen J Hill; Malcolm Weir; Fiona H Marshall
Journal:  MAbs       Date:  2014 Jan-Feb       Impact factor: 5.857

6.  Co-crystallization with diabodies: A case study for the introduction of synthetic symmetry.

Authors:  Chelsy Chesterman; Eddy Arnold
Journal:  Structure       Date:  2021-02-25       Impact factor: 5.871

7.  Expression, purification, crystallization, and preliminary X-ray crystallographic studies of the human adiponectin receptors, AdipoR1 and AdipoR2.

Authors:  Hiroaki Tanabe; Kanna Motoyama; Mariko Ikeda; Motoaki Wakiyama; Takaho Terada; Noboru Ohsawa; Toshiaki Hosaka; Masakatsu Hato; Yoshifumi Fujii; Yoshihiro Nakamura; Satoshi Ogasawara; Tomoya Hino; Takeshi Murata; So Iwata; Miki Okada-Iwabu; Masato Iwabu; Kunio Hirata; Yoshiaki Kawano; Masaki Yamamoto; Tomomi Kimura-Someya; Mikako Shirouzu; Toshimasa Yamauchi; Takashi Kadowaki; Shigeyuki Yokoyama
Journal:  J Struct Funct Genomics       Date:  2015-01-10

8.  In vitro nanobody discovery for integral membrane protein targets.

Authors:  Rupak Doshi; Beverly R Chen; Cecile Rose T Vibat; Norman Huang; Chang-Wook Lee; Geoffrey Chang
Journal:  Sci Rep       Date:  2014-10-24       Impact factor: 4.379

Review 9.  A current perspective on applications of macrocyclic-peptide-based high-affinity ligands.

Authors:  Daniël Leenheer; Peter Ten Dijke; Christopher John Hipolito
Journal:  Biopolymers       Date:  2016-11       Impact factor: 2.505

10.  Molecular pathogenesis of spondylocheirodysplastic Ehlers-Danlos syndrome caused by mutant ZIP13 proteins.

Authors:  Bum-Ho Bin; Shintaro Hojyo; Toshiaki Hosaka; Jinhyuk Bhin; Hiroki Kano; Tomohiro Miyai; Mariko Ikeda; Tomomi Kimura-Someya; Mikako Shirouzu; Eun-Gyung Cho; Kazuhisa Fukue; Taiho Kambe; Wakana Ohashi; Kyu-Han Kim; Juyeon Seo; Dong-Hwa Choi; Yeon-Ju Nam; Daehee Hwang; Ayako Fukunaka; Yoshio Fujitani; Shigeyuki Yokoyama; Andrea Superti-Furga; Shiro Ikegawa; Tae Ryong Lee; Toshiyuki Fukada
Journal:  EMBO Mol Med       Date:  2014-08       Impact factor: 12.137

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