Literature DB >> 23656892

Quantification of extracellular carbonic anhydrase activity in two marine diatoms and investigation of its role.

Brian M Hopkinson1, Christof Meile, Chen Shen.   

Abstract

Many microalgae induce an extracellular carbonic anhydrase (eCA), associated with the cell surface, at low carbon dioxide (CO2) concentrations. This enzyme is thought to aid inorganic carbon uptake by generating CO2 at the cell surface, but alternative roles have been proposed. We developed a new approach to quantify eCA activity in which a reaction-diffusion model is fit to data on (18)O removal from inorganic carbon. In contrast to previous methods, eCA activity is treated as a surface process, allowing the effects of eCA on cell boundary-layer chemistry to be assessed. Using this approach, we measured eCA activity in two marine diatoms (Thalassiosira pseudonana and Thalassiosira weissflogii), characterized the kinetics of this enzyme, and studied its regulation as a function of culture pH and CO2 concentration. In support of a role for eCA in CO2 supply, eCA activity specifically responded to low CO2 rather than to changes in pH or HCO3(-), and the rates of eCA activity are nearly optimal for maintaining cell surface CO2 concentrations near those in the bulk solution. Although the CO2 gradients abolished by eCA are small (less than 0.5 μm concentration difference between bulk and cell surface), CO2 uptake in these diatoms is a passive process driven by small concentration gradients. Analysis of the effects of short-term and long-term eCA inhibition on photosynthesis and growth indicates that eCA provides a small energetic benefit by reducing the surface-to-bulk CO2 gradient. Alternative roles for eCA in CO2 recovery as HCO3(-) and surface pH regulation were investigated, but eCA was found to have minimal effects on these processes.

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Year:  2013        PMID: 23656892      PMCID: PMC3668045          DOI: 10.1104/pp.113.217737

Source DB:  PubMed          Journal:  Plant Physiol        ISSN: 0032-0889            Impact factor:   8.340


  20 in total

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Authors:  Murray Badger
Journal:  Photosynth Res       Date:  2003       Impact factor: 3.573

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Journal:  J Biol Chem       Date:  1976-07-25       Impact factor: 5.157

4.  Periplasmic carbonic anhydrase structural gene (Cah1) mutant in chlamydomonas reinhardtii

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Journal:  Plant Physiol       Date:  1999-07       Impact factor: 8.340

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Authors:  D N Silverman
Journal:  Methods Enzymol       Date:  1982       Impact factor: 1.600

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Authors:  C Tu; G C Wynns; R E McMurray; D N Silverman
Journal:  J Biol Chem       Date:  1978-11-25       Impact factor: 5.157

7.  Efficiency of the CO2-concentrating mechanism of diatoms.

Authors:  Brian M Hopkinson; Christopher L Dupont; Andrew E Allen; François M M Morel
Journal:  Proc Natl Acad Sci U S A       Date:  2011-02-14       Impact factor: 11.205

8.  Diffusion-limited exchange of 18O between CO2 and water in red cell suspensions.

Authors:  D N Silverman; C K Tu; N Roessler
Journal:  Respir Physiol       Date:  1981-06

9.  Extracellular carbonic anhydrase facilitates carbon dioxide availability for photosynthesis in the marine dinoflagellate prorocentrum micans

Authors: 
Journal:  Plant Physiol       Date:  1999-05       Impact factor: 8.340

Review 10.  Regulation of intracellular pH.

Authors:  Walter F Boron
Journal:  Adv Physiol Educ       Date:  2004-12       Impact factor: 2.288

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  20 in total

Review 1.  Mechanisms of carbon dioxide acquisition and CO2 sensing in marine diatoms: a gateway to carbon metabolism.

Authors:  Yusuke Matsuda; Brian M Hopkinson; Kensuke Nakajima; Christopher L Dupont; Yoshinori Tsuji
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2017-09-05       Impact factor: 6.237

2.  Can diatom girdle band pores act as a hydrodynamic viral defense mechanism?

Authors:  J W Herringer; D Lester; G E Dorrington; G Rosengarten
Journal:  J Biol Phys       Date:  2019-05-28       Impact factor: 1.365

3.  The effects of pH and pCO2 on photosynthesis and respiration in the diatom Thalassiosira weissflogii.

Authors:  Johanna A L Goldman; Michael L Bender; François M M Morel
Journal:  Photosynth Res       Date:  2017-01-06       Impact factor: 3.573

4.  Localization of putative carbonic anhydrases in the marine diatom, Thalassiosira pseudonana.

Authors:  Mio Samukawa; Chen Shen; Brian M Hopkinson; Yusuke Matsuda
Journal:  Photosynth Res       Date:  2014-01-11       Impact factor: 3.573

5.  Localization of enzymes relating to C4 organic acid metabolisms in the marine diatom, Thalassiosira pseudonana.

Authors:  Rie Tanaka; Sae Kikutani; Anggara Mahardika; Yusuke Matsuda
Journal:  Photosynth Res       Date:  2014-01-11       Impact factor: 3.573

6.  The intracellular distribution of inorganic carbon fixing enzymes does not support the presence of a C4 pathway in the diatom Phaeodactylum tricornutum.

Authors:  Daniela Ewe; Masaaki Tachibana; Sae Kikutani; Ansgar Gruber; Carolina Río Bártulos; Grzegorz Konert; Aaron Kaplan; Yusuke Matsuda; Peter G Kroth
Journal:  Photosynth Res       Date:  2018-03-23       Impact factor: 3.573

7.  Characterization of a CO2-Concentrating Mechanism with Low Sodium Dependency in the Centric Diatom Chaetoceros gracilis.

Authors:  Yoshinori Tsuji; George Kusi-Appiah; Noriko Kozai; Yuri Fukuda; Takashi Yamano; Hideya Fukuzawa
Journal:  Mar Biotechnol (NY)       Date:  2021-06-09       Impact factor: 3.619

8.  Light and CO2/cAMP Signal Cross Talk on the Promoter Elements of Chloroplastic β-Carbonic Anhydrase Genes in the Marine Diatom Phaeodactylum tricornutum.

Authors:  Atsushi Tanaka; Naoki Ohno; Kensuke Nakajima; Yusuke Matsuda
Journal:  Plant Physiol       Date:  2015-12-11       Impact factor: 8.340

9.  The impact of iron limitation on the physiology of the Antarctic diatom Chaetoceros simplex.

Authors:  Katherina Petrou; Scarlett Trimborn; Björn Rost; Peter J Ralph; Christel S Hassler
Journal:  Mar Biol       Date:  2014-01-29       Impact factor: 2.573

10.  Differential effects of ocean acidification on carbon acquisition in two bloom-forming dinoflagellate species.

Authors:  Tim Eberlein; Dedmer B Van de Waal; Björn Rost
Journal:  Physiol Plant       Date:  2014-01-24       Impact factor: 4.500

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