Literature DB >> 23654305

Evolution in microbes.

Edo Kussell1.   

Abstract

This review presents a broad survey of experimental microbial evolution, covering diverse topics including trade-offs, epistasis, fluctuating conditions, spatial dynamics, cooperation, aging, and stochastic switching. Emphasis is placed on examples that highlight key conceptual points or address theoretical predictions. Experimental evolution is discussed from two points of view. First, population trajectories are described as adaptive walks on a fitness landscape, whose genetic structure can be probed by experiments. Second, populations are viewed from a physiological perspective, and their nongenetic heterogeneity is examined. Bringing together these two viewpoints remains a major challenge for the future.

Mesh:

Year:  2013        PMID: 23654305     DOI: 10.1146/annurev-biophys-083012-130320

Source DB:  PubMed          Journal:  Annu Rev Biophys        ISSN: 1936-122X            Impact factor:   12.981


  20 in total

1.  Populations adapt to fluctuating selection using derived and ancestral allelic diversity.

Authors:  Wei-Hsiang Lin; Mark J Rocco; Amelia Bertozzi-Villa; Edo Kussell
Journal:  Evolution       Date:  2015-05-27       Impact factor: 3.694

2.  Survival probability of beneficial mutations in bacterial batch culture.

Authors:  Lindi M Wahl; Anna Dai Zhu
Journal:  Genetics       Date:  2015-03-09       Impact factor: 4.562

3.  Collective behavior and nongenetic inheritance allow bacterial populations to adapt to changing environments.

Authors:  Henry H Mattingly; Thierry Emonet
Journal:  Proc Natl Acad Sci U S A       Date:  2022-06-21       Impact factor: 12.779

4.  Searching for principles of microbial physiology.

Authors:  Frank J Bruggeman; Robert Planqué; Douwe Molenaar; Bas Teusink
Journal:  FEMS Microbiol Rev       Date:  2020-11-24       Impact factor: 16.408

Review 5.  How Do Cells Adapt? Stories Told in Landscapes.

Authors:  Luca Agozzino; Gábor Balázsi; Jin Wang; Ken A Dill
Journal:  Annu Rev Chem Biomol Eng       Date:  2020-06-07       Impact factor: 11.059

6.  An evolutionary perspective on the Crabtree effect.

Authors:  Thomas Pfeiffer; Annabel Morley
Journal:  Front Mol Biosci       Date:  2014-10-21

7.  The idiosyncrasy of spatial structure in bacterial competition.

Authors:  Felix J H Hol; Peter Galajda; Rutger G Woolthuis; Cees Dekker; Juan E Keymer
Journal:  BMC Res Notes       Date:  2015-06-17

Review 8.  Metabolism at evolutionary optimal States.

Authors:  Iraes Rabbers; Johan H van Heerden; Niclas Nordholt; Herwig Bachmann; Bas Teusink; Frank J Bruggeman
Journal:  Metabolites       Date:  2015-06-02

9.  Lack of Ecological and Life History Context Can Create the Illusion of Social Interactions in Dictyostelium discoideum.

Authors:  Ricardo Martínez-García; Corina E Tarnita
Journal:  PLoS Comput Biol       Date:  2016-12-15       Impact factor: 4.475

Review 10.  Waddington's Landscapes in the Bacterial World.

Authors:  María A Sánchez-Romero; Josep Casadesús
Journal:  Front Microbiol       Date:  2021-06-04       Impact factor: 5.640

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