Literature DB >> 23650355

Salts drive controllable multilayered upright assembly of amyloid-like peptides at mica/water interface.

Bin Dai1, Seung-gu Kang, Tien Huynh, Haozhi Lei, Matteo Castelli, Jun Hu, Yi Zhang, Ruhong Zhou.   

Abstract

Surface-assisted self-assembly of amyloid-like peptides has received considerable interest in both amyloidosis research and nanotechnology in recent years. Despite extensive studies, some controlling factors, such as salts, are still not well understood, even though it is known that some salts can promote peptide self-assemblies through the so-called "salting-out" effect. However, they are usually noncontrollable, disordered, amorphous aggregates. Here, we show via a combined experimental and theoretical approach that a conserved consensus peptide NH2-VGGAVVAGV-CONH2 (GAV-9) (from representative amyloidogenic proteins) can self-assemble into highly ordered, multilayered nanofilaments, with surprising all-upright conformations, under high-salt concentrations. Our atomic force microscopy images also demonstrate that the vertical stacking of multiple layers is highly controllable by tuning the ionic strength, such as from 0 mM (monolayer) to 100 mM (mainly double layer), and to 250 mM MgCl2 (double, triple, quadruple, and quintuple layers). Our atomistic molecular dynamics simulations then reveal that these individual layers have very different internal nanostructures, with parallel β-sheets in the first monolayer but antiparallel β-sheets in the subsequent upper layers due to their different microenvironment. Further studies show that the growth of multilayered, all-upright nanostructures is a common phenomenon for GAV-9 at the mica/water interface, under a variety of salt types and a wide range of salt concentrations.

Entities:  

Keywords:  amyloid peptide; atomic force microscopy; salt effect; self-assembly on mica

Mesh:

Substances:

Year:  2013        PMID: 23650355      PMCID: PMC3666679          DOI: 10.1073/pnas.1220711110

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  42 in total

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2.  Mechanical manipulation assisted self-assembly to achieve defect repair and guided epitaxial growth of individual peptide nanofilaments.

Authors:  Fu-Chun Zhang; Feng Zhang; Hai-Nan Su; Hai Li; Yi Zhang; Jun Hu
Journal:  ACS Nano       Date:  2010-10-26       Impact factor: 15.881

3.  Acceleration of alpha-synuclein aggregation by homologous peptides.

Authors:  Hai-Ning Du; Hong-Tao Li; Feng Zhang; Xiao-Jing Lin; Jia-Hao Shi; Yan-Hong Shi; Li-Na Ji; Jun Hu; Dong-Hai Lin; Hong-Yu Hu
Journal:  FEBS Lett       Date:  2006-06-02       Impact factor: 4.124

4.  Self-assembly of multidomain peptides: balancing molecular frustration controls conformation and nanostructure.

Authors:  He Dong; Sergey E Paramonov; Lorenzo Aulisa; Erica L Bakota; Jeffrey D Hartgerink
Journal:  J Am Chem Soc       Date:  2007-09-26       Impact factor: 15.419

5.  Hydrophobic interaction drives surface-assisted epitaxial assembly of amyloid-like peptides.

Authors:  Seung-gu Kang; Tien Huynh; Zhen Xia; Yi Zhang; Haiping Fang; Guanghong Wei; Ruhong Zhou
Journal:  J Am Chem Soc       Date:  2013-02-13       Impact factor: 15.419

6.  Collapse of unfolded proteins in a mixture of denaturants.

Authors:  Zhen Xia; Payel Das; Eugene I Shakhnovich; Ruhong Zhou
Journal:  J Am Chem Soc       Date:  2012-10-24       Impact factor: 15.419

7.  Controlling self-assembly of engineered peptides on graphite by rational mutation.

Authors:  Christopher R So; Yuhei Hayamizu; Hilal Yazici; Carolyn Gresswell; Dmitriy Khatayevich; Candan Tamerler; Mehmet Sarikaya
Journal:  ACS Nano       Date:  2012-01-18       Impact factor: 15.881

8.  Dynamics of Asp23-Lys28 salt-bridge formation in Abeta10-35 monomers.

Authors:  Bogdan Tarus; John E Straub; D Thirumalai
Journal:  J Am Chem Soc       Date:  2006-12-20       Impact factor: 15.419

9.  Sulfates dramatically stabilize a salt-dependent type of glucagon fibrils.

Authors:  Jesper Søndergaard Pedersen; James M Flink; Dantcho Dikov; Daniel Erik Otzen
Journal:  Biophys J       Date:  2006-03-13       Impact factor: 4.033

10.  Structures and free-energy landscapes of the wild type and mutants of the Abeta(21-30) peptide are determined by an interplay between intrapeptide electrostatic and hydrophobic interactions.

Authors:  Bogdan Tarus; John E Straub; D Thirumalai
Journal:  J Mol Biol       Date:  2008-05-14       Impact factor: 5.469

View more
  6 in total

1.  Tunable assembly of amyloid-forming peptides into nanosheets as a retrovirus carrier.

Authors:  Bin Dai; Dan Li; Wenhui Xi; Fang Luo; Xiang Zhang; Man Zou; Mi Cao; Jun Hu; Wenyuan Wang; Guanghong Wei; Yi Zhang; Cong Liu
Journal:  Proc Natl Acad Sci U S A       Date:  2015-02-23       Impact factor: 11.205

2.  Rare Dissipative Transitions Punctuate the Initiation of Chemical Denaturation in Proteins.

Authors:  Jeffrey K Weber; Seung-Gu Kang; Ruhong Zhou
Journal:  Biophys J       Date:  2018-02-27       Impact factor: 4.033

3.  Interaction of amyloid inhibitor proteins with amyloid beta peptides: insight from molecular dynamics simulations.

Authors:  Payel Das; Seung-gu Kang; Sally Temple; Georges Belfort
Journal:  PLoS One       Date:  2014-11-25       Impact factor: 3.240

4.  EGCG in Green Tea Induces Aggregation of HMGB1 Protein through Large Conformational Changes with Polarized Charge Redistribution.

Authors:  Xuan-Yu Meng; Baoyu Li; Shengtang Liu; Hongsuk Kang; Lin Zhao; Ruhong Zhou
Journal:  Sci Rep       Date:  2016-02-22       Impact factor: 4.379

5.  Graphene-Induced Pore Formation on Cell Membranes.

Authors:  Guangxin Duan; Yuanzhao Zhang; Binquan Luan; Jeffrey K Weber; Royce W Zhou; Zaixing Yang; Lin Zhao; Jiaying Xu; Judong Luo; Ruhong Zhou
Journal:  Sci Rep       Date:  2017-02-20       Impact factor: 4.379

Review 6.  Bottom-up supramolecular assembly in two dimensions.

Authors:  Ignacio Insua; Julian Bergueiro; Alejandro Méndez-Ardoy; Irene Lostalé-Seijo; Javier Montenegro
Journal:  Chem Sci       Date:  2022-01-19       Impact factor: 9.825

  6 in total

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