Literature DB >> 22233341

Controlling self-assembly of engineered peptides on graphite by rational mutation.

Christopher R So1, Yuhei Hayamizu, Hilal Yazici, Carolyn Gresswell, Dmitriy Khatayevich, Candan Tamerler, Mehmet Sarikaya.   

Abstract

Self-assembly of proteins on surfaces is utilized in many fields to integrate intricate biological structures and diverse functions with engineered materials. Controlling proteins at bio-solid interfaces relies on establishing key correlations between their primary sequences and resulting spatial organizations on substrates. Protein self-assembly, however, remains an engineering challenge. As a novel approach, we demonstrate here that short dodecapeptides selected by phage display are capable of self-assembly on graphite and form long-range-ordered biomolecular nanostructures. Using atomic force microscopy and contact angle studies, we identify three amino acid domains along the primary sequence that steer peptide ordering and lead to nanostructures with uniformly displayed residues. The peptides are further engineered via simple mutations to control fundamental interfacial processes, including initial binding, surface aggregation and growth kinetics, and intermolecular interactions. Tailoring short peptides via their primary sequence offers versatile control over molecular self-assembly, resulting in well-defined surface properties essential in building engineered, chemically rich, bio-solid interfaces.

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Year:  2012        PMID: 22233341      PMCID: PMC3304023          DOI: 10.1021/nn204631x

Source DB:  PubMed          Journal:  ACS Nano        ISSN: 1936-0851            Impact factor:   15.881


  33 in total

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Authors:  Stephen J Sowerby; George B Petersen; Nils G Holm
Journal:  Orig Life Evol Biosph       Date:  2002-02       Impact factor: 1.950

Review 2.  Protein microarray technology.

Authors:  Markus F Templin; Dieter Stoll; Monika Schrenk; Petra C Traub; Christian F Vöhringer; Thomas O Joos
Journal:  Trends Biotechnol       Date:  2002-04       Impact factor: 19.536

3.  Peptides with selective affinity for carbon nanotubes.

Authors:  Siqun Wang; Elen S Humphreys; Sung-Yoon Chung; Daniel F Delduco; Steven R Lustig; Hong Wang; Kimberley N Parker; Nancy W Rizzo; Shekhar Subramoney; Yet-Ming Chiang; Anand Jagota
Journal:  Nat Mater       Date:  2003-03       Impact factor: 43.841

4.  Template-directed assembly of a de novo designed protein.

Authors:  Christina L Brown; Ilhan A Aksay; Dudley A Saville; Michael H Hecht
Journal:  J Am Chem Soc       Date:  2002-06-19       Impact factor: 15.419

5.  Computational design of an enzyme catalyst for a stereoselective bimolecular Diels-Alder reaction.

Authors:  Justin B Siegel; Alexandre Zanghellini; Helena M Lovick; Gert Kiss; Abigail R Lambert; Jennifer L St Clair; Jasmine L Gallaher; Donald Hilvert; Michael H Gelb; Barry L Stoddard; Kendall N Houk; Forrest E Michael; David Baker
Journal:  Science       Date:  2010-07-16       Impact factor: 47.728

6.  Global analysis of protein activities using proteome chips.

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Journal:  Science       Date:  2001-07-26       Impact factor: 47.728

7.  Interactions between acidic proteins and crystals: stereochemical requirements in biomineralization.

Authors:  L Addadi; S Weiner
Journal:  Proc Natl Acad Sci U S A       Date:  1985-06       Impact factor: 11.205

8.  A simple method for displaying the hydropathic character of a protein.

Authors:  J Kyte; R F Doolittle
Journal:  J Mol Biol       Date:  1982-05-05       Impact factor: 5.469

9.  Metal-recognition by repeating polypeptides.

Authors:  S Brown
Journal:  Nat Biotechnol       Date:  1997-03       Impact factor: 54.908

10.  Silicatein filaments and subunits from a marine sponge direct the polymerization of silica and silicones in vitro.

Authors:  J N Cha; K Shimizu; Y Zhou; S C Christiansen; B F Chmelka; G D Stucky; D E Morse
Journal:  Proc Natl Acad Sci U S A       Date:  1999-01-19       Impact factor: 11.205

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  16 in total

1.  Salts drive controllable multilayered upright assembly of amyloid-like peptides at mica/water interface.

Authors:  Bin Dai; Seung-gu Kang; Tien Huynh; Haozhi Lei; Matteo Castelli; Jun Hu; Yi Zhang; Ruhong Zhou
Journal:  Proc Natl Acad Sci U S A       Date:  2013-05-06       Impact factor: 11.205

2.  Controlling the surface chemistry of graphite by engineered self-assembled peptides.

Authors:  Dmitriy Khatayevich; Christopher R So; Yuhei Hayamizu; Carolyn Gresswell; Mehmet Sarikaya
Journal:  Langmuir       Date:  2012-04-18       Impact factor: 3.882

3.  Molecular-level insights into the surface-induced assembly of functional bacterial amyloid.

Authors:  Thorbjørn Vincent Sønderby; Yimin Zou; Pengyu Wang; Chen Wang; Daniel Erik Otzen
Journal:  Biophys J       Date:  2022-08-18       Impact factor: 3.699

Review 4.  Functional Bacterial Amyloids: Understanding Fibrillation, Regulating Biofilm Fibril Formation and Organizing Surface Assemblies.

Authors:  Thorbjørn Vincent Sønderby; Zahra Najarzadeh; Daniel Erik Otzen
Journal:  Molecules       Date:  2022-06-24       Impact factor: 4.927

5.  De novo designed peptides form a highly catalytic ordered nanoarchitecture on a graphite surface.

Authors:  Wei Luo; Hironaga Noguchi; Chen Chen; Yoshiki Nakamura; Chishu Homma; Oleksii Zozulia; Ivan V Korendovych; Yuhei Hayamizu
Journal:  Nanoscale       Date:  2022-06-16       Impact factor: 8.307

6.  Self-assembly mechanisms of nanofibers from peptide amphiphiles in solution and on substrate surfaces.

Authors:  Hsien-Shun Liao; Jing Lin; Yang Liu; Peng Huang; Albert Jin; Xiaoyuan Chen
Journal:  Nanoscale       Date:  2016-08-04       Impact factor: 7.790

7.  Engineered Chimeric Peptides as Antimicrobial Surface Coating Agents toward Infection-Free Implants.

Authors:  Hilal Yazici; Mary B O'Neill; Turgay Kacar; Brandon R Wilson; E Emre Oren; Mehmet Sarikaya; Candan Tamerler
Journal:  ACS Appl Mater Interfaces       Date:  2016-02-22       Impact factor: 9.229

8.  Carbon-binding designer proteins that discriminate between sp2- and sp3-hybridized carbon surfaces.

Authors:  Brandon L Coyle; Marco Rolandi; François Baneyx
Journal:  Langmuir       Date:  2013-04-02       Impact factor: 3.882

9.  Single-carbon discrimination by selected peptides for individual detection of volatile organic compounds.

Authors:  Soomi Ju; Ki-Young Lee; Sun-Joon Min; Yong Kyoung Yoo; Kyo Seon Hwang; Sang Kyung Kim; Hyunjung Yi
Journal:  Sci Rep       Date:  2015-03-17       Impact factor: 4.379

10.  Graphene Symmetry Amplified by Designed Peptide Self-Assembly.

Authors:  Gina-Mirela Mustata; Yong Ho Kim; Jian Zhang; William F DeGrado; Gevorg Grigoryan; Meni Wanunu
Journal:  Biophys J       Date:  2016-06-07       Impact factor: 4.033

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