Literature DB >> 23649762

RNA-binding protein Rbm47 binds to Nanog in mouse embryonic stem cells.

Meghdad Yeganeh1, Ehsan Seyedjafari, Farnaz Akbari Kamrani, Nasser Ghaemi.   

Abstract

Embryonic stem cells (ES cells) are pluripotent cells capable for self-renewal and to differentiate to all cell types. Finding the molecular mechanisms responsible for these unique characteristics of ES cells is important. RNA-binding proteins play important roles in post-transcriptional gene regulation by binding to specific mRNA targets. In this study, we investigated the targets of RNA-binding protein Rbm47 in mouse ES cells. Overexpression of HA epitope-tagged Rbm47 in mouse ES cells followed by RNA-binding protein immunoprecipitation, and then RT-PCR analysis of co-immunoprecipitated RNA showed that Rbm47 binds to Nanog transcript in mouse ES cells and doesn't bind to Sox2 and Oct4 transcripts in these cells. This finding can give rise to reveal molecular mechanisms underlying pluripotency and stemness of ES cells and will be necessary for efficient application of these cells in regenerative medicine and tissue engineering.

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Year:  2013        PMID: 23649762     DOI: 10.1007/s11033-013-2528-0

Source DB:  PubMed          Journal:  Mol Biol Rep        ISSN: 0301-4851            Impact factor:   2.316


  53 in total

1.  Ribonomics: identifying mRNA subsets in mRNP complexes using antibodies to RNA-binding proteins and genomic arrays.

Authors:  Scott A Tenenbaum; Patrick J Lager; Craig C Carson; Jack D Keene
Journal:  Methods       Date:  2002-02       Impact factor: 3.608

Review 2.  Transcriptional regulatory networks in embryonic stem cells.

Authors:  X Chen; V B Vega; H-H Ng
Journal:  Cold Spring Harb Symp Quant Biol       Date:  2008-11-06

3.  Gene expression analysis of messenger RNP complexes.

Authors:  Luiz O F Penalva; Scott A Tenenbaum; Jack D Keene
Journal:  Methods Mol Biol       Date:  2004

4.  A three-hybrid system to detect RNA-protein interactions in vivo.

Authors:  D J SenGupta; B Zhang; B Kraemer; P Pochart; S Fields; M Wickens
Journal:  Proc Natl Acad Sci U S A       Date:  1996-08-06       Impact factor: 11.205

Review 5.  Stem cells and neurodegenerative diseases: where is it all going?

Authors:  Roger A Barker
Journal:  Regen Med       Date:  2012-11       Impact factor: 3.806

Review 6.  The transcriptional regulation of pluripotency.

Authors:  Jia-Chi Yeo; Huck-Hui Ng
Journal:  Cell Res       Date:  2012-12-11       Impact factor: 25.617

7.  Analyzing mRNA-protein complexes using a yeast three-hybrid system.

Authors:  David S Bernstein; Natascha Buter; Craig Stumpf; Marvin Wickens
Journal:  Methods       Date:  2002-02       Impact factor: 3.608

Review 8.  Pivots of pluripotency: the roles of non-coding RNA in regulating embryonic and induced pluripotent stem cells.

Authors:  Jeffrey S Huo; Elias T Zambidis
Journal:  Biochim Biophys Acta       Date:  2012-10-24

9.  Identification of neuronal RNA targets of TDP-43-containing ribonucleoprotein complexes.

Authors:  Chantelle F Sephton; Can Cenik; Alper Kucukural; Eric B Dammer; Basar Cenik; Yuhong Han; Colleen M Dewey; Frederick P Roth; Joachim Herz; Junmin Peng; Melissa J Moore; Gang Yu
Journal:  J Biol Chem       Date:  2010-11-04       Impact factor: 5.157

10.  Global analysis of yeast mRNPs.

Authors:  Sarah F Mitchell; Saumya Jain; Meipei She; Roy Parker
Journal:  Nat Struct Mol Biol       Date:  2012-12-09       Impact factor: 15.369

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  4 in total

1.  RNA-binding proteins in pluripotency, differentiation, and reprogramming.

Authors:  Diana Guallar; Jianlong Wang
Journal:  Front Biol (Beijing)       Date:  2014-10

Review 2.  RNA binding motif 47 (RBM47): emerging roles in vertebrate development, RNA editing and cancer.

Authors:  Pavan Kumar Mysuru Shivalingappa; Vaishali Sharma; Anjali Shiras; Sharmila A Bapat
Journal:  Mol Cell Biochem       Date:  2021-09-09       Impact factor: 3.396

3.  RNA-binding motif protein 47 inhibits Nrf2 activity to suppress tumor growth in lung adenocarcinoma.

Authors:  T Sakurai; K Isogaya; S Sakai; M Morikawa; Y Morishita; S Ehata; K Miyazono; D Koinuma
Journal:  Oncogene       Date:  2016-02-29       Impact factor: 9.867

4.  RBM47 is a Critical Regulator of Mouse Embryonic Stem Cell Differentiation.

Authors:  Pavan Kumar Mysuru Shivalingappa; Divya Kumari Singh; Vaishali Sharma; Vivek Arora; Anjali Shiras; Sharmila A Bapat
Journal:  Stem Cell Rev Rep       Date:  2022-08-20       Impact factor: 6.692

  4 in total

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