Literature DB >> 23648217

Statistical methodological issues in mapping historical schistosomiasis survey data.

Frédérique Chammartin1, Eveline Hürlimann, Giovanna Raso, Eliézer K N'Goran, Jürg Utzinger, Penelope Vounatsou.   

Abstract

For schistosomiasis and other neglected tropical diseases for which resources for control are still limited, model-based maps are needed for prioritising spatial targeting of control interventions and surveillance of control programmes. Bayesian geostatistical modelling has been widely and effectively used to generate smooth empirical risk maps. In this paper, we review important issues related to the modelling of schistosomiasis risk, including Bayesian computation of large datasets, heterogeneity of historical survey data, stationary and isotropy assumptions and novel approaches for Bayesian geostatistical variable selection. We provide an example of advanced Bayesian geostatistical variable selection based on historical prevalence data of Schistosoma mansoni in Côte d'Ivoire. We include a "parameter expanded normal mixture of inverse-gamma" prior for the regression coefficients, which in turn allows selection of blocks of covariates, particularly categorical variables. The implemented Bayesian geostatistical variable selection provided a rigorous approach for the selection of predictors within a Bayesian geostatistical framework, identified the most important predictors of S. mansoni infection risk and led to a more parsimonious model compared to traditional selection approaches that ignore the spatial structure in the data. In conclusion, statistical advances in Bayesian geostatistical modelling offer unique opportunities to account for important inherent characteristics of the Schistosoma infection, and hence Bayesian geostatistical models can guide the spatial targeting of control interventions.
Copyright © 2013 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Bayesian geostatistics; Block of covariates; Côte d’Ivoire; Geostatistical variable selection; Mapping; Schistosomiasis

Mesh:

Year:  2013        PMID: 23648217     DOI: 10.1016/j.actatropica.2013.04.012

Source DB:  PubMed          Journal:  Acta Trop        ISSN: 0001-706X            Impact factor:   3.112


  15 in total

1.  Model building and assessment of the impact of covariates for disease prevalence mapping in low-resource settings: to explain and to predict.

Authors:  Emanuele Giorgi; Claudio Fronterrè; Peter M Macharia; Victor A Alegana; Robert W Snow; Peter J Diggle
Journal:  J R Soc Interface       Date:  2021-06-02       Impact factor: 4.118

2.  Malaria risk in Nigeria: Bayesian geostatistical modelling of 2010 malaria indicator survey data.

Authors:  Abbas B Adigun; Efron N Gajere; Olusola Oresanya; Penelope Vounatsou
Journal:  Malar J       Date:  2015-04-14       Impact factor: 2.979

3.  Bayesian geostatistical model-based estimates of soil-transmitted helminth infection in Nigeria, including annual deworming requirements.

Authors:  Akinola S Oluwole; Uwem F Ekpo; Dimitrios-Alexios Karagiannis-Voules; Eniola M Abe; Francisca O Olamiju; Sunday Isiyaku; Chukwu Okoronkwo; Yisa Saka; Obiageli J Nebe; Eka I Braide; Chiedu F Mafiana; Jürg Utzinger; Penelope Vounatsou
Journal:  PLoS Negl Trop Dis       Date:  2015-04-24

4.  Bayesian geostatistical modelling of soil-transmitted helminth survey data in the People's Republic of China.

Authors:  Ying-Si Lai; Xiao-Nong Zhou; Jürg Utzinger; Penelope Vounatsou
Journal:  Parasit Vectors       Date:  2013-12-18       Impact factor: 3.876

5.  Bayesian risk mapping and model-based estimation of Schistosoma haematobium-Schistosoma mansoni co-distribution in Côte d'Ivoire.

Authors:  Frédérique Chammartin; Clarisse A Houngbedji; Eveline Hürlimann; Richard B Yapi; Kigbafori D Silué; Gotianwa Soro; Ferdinand N Kouamé; Eliézer K N Goran; Jürg Utzinger; Giovanna Raso; Penelope Vounatsou
Journal:  PLoS Negl Trop Dis       Date:  2014-12-18

6.  Sustaining control of schistosomiasis mansoni in moderate endemicity areas in western Côte d'Ivoire: a SCORE study protocol.

Authors:  Rufin K Assaré; Stefanie Knopp; Nicaise A N'Guessan; Ahoua Yapi; Yves-Nathan T Tian-Bi; Patrick K Yao; Jean T Coulibaly; Mamadou Ouattara; Aboulaye Meïté; Alan Fenwick; Eliézer K N'Goran; Jürg Utzinger
Journal:  BMC Public Health       Date:  2014-12-17       Impact factor: 3.295

7.  Co-endemicity of Pulmonary Tuberculosis and Intestinal Helminth Infection in the People's Republic of China.

Authors:  Xin-Xu Li; Zhou-Peng Ren; Li-Xia Wang; Hui Zhang; Shi-Wen Jiang; Jia-Xu Chen; Jin-Feng Wang; Xiao-Nong Zhou
Journal:  PLoS Negl Trop Dis       Date:  2016-04-18

8.  Spatial mapping and prediction of Plasmodium falciparum infection risk among school-aged children in Côte d'Ivoire.

Authors:  Clarisse A Houngbedji; Frédérique Chammartin; Richard B Yapi; Eveline Hürlimann; Prisca B N'Dri; Kigbafori D Silué; Gotianwa Soro; Benjamin G Koudou; Serge-Brice Assi; Eliézer K N'Goran; Agathe Fantodji; Jürg Utzinger; Penelope Vounatsou; Giovanna Raso
Journal:  Parasit Vectors       Date:  2016-09-07       Impact factor: 3.876

9.  Optimising cluster survey design for planning schistosomiasis preventive chemotherapy.

Authors:  Sarah C L Knowles; Hugh J W Sturrock; Hugo Turner; Jane M Whitton; Charlotte M Gower; Samuel Jemu; Anna E Phillips; Aboulaye Meite; Brent Thomas; Karsor Kollie; Catherine Thomas; Maria P Rebollo; Ben Styles; Michelle Clements; Alan Fenwick; Wendy E Harrison; Fiona M Fleming
Journal:  PLoS Negl Trop Dis       Date:  2017-05-26

10.  Modelling the geographical distribution of soil-transmitted helminth infections in Bolivia.

Authors:  Frédérique Chammartin; Ronaldo G C Scholte; John B Malone; Mara E Bavia; Prixia Nieto; Jürg Utzinger; Penelope Vounatsou
Journal:  Parasit Vectors       Date:  2013-05-25       Impact factor: 3.876

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