Literature DB >> 23645633

Biomineralization toolkit: the importance of sample cleaning prior to the characterization of biomineral proteomes.

Paula Ramos-Silva, Frédéric Marin, Jaap Kaandorp, Benjamin Marie.   

Abstract

Mesh：

Year:  2013        PMID： 23645633      PMCID： PMC3683792          DOI： 10.1073/pnas.1303657110

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN： 0027-8424            Impact factor:   11.205


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  4 in total

1.  The shell-forming proteome of Lottia gigantea reveals both deep conservations and lineage-specific novelties.

Authors:  Benjamin Marie; Daniel J Jackson; Paula Ramos-Silva; Isabelle Zanella-Cléon; Nathalie Guichard; Frédéric Marin
Journal:  FEBS J       Date:  2012-12-07       Impact factor: 5.542

2.  Different secretory repertoires control the biomineralization processes of prism and nacre deposition of the pearl oyster shell.

Authors:  Benjamin Marie; Caroline Joubert; Alexandre Tayalé; Isabelle Zanella-Cléon; Corinne Belliard; David Piquemal; Nathalie Cochennec-Laureau; Frédéric Marin; Yannick Gueguen; Caroline Montagnani
Journal:  Proc Natl Acad Sci U S A       Date:  2012-12-03       Impact factor: 11.205

3.  Proteomic analysis of skeletal organic matrix from the stony coral Stylophora pistillata.

Authors:  Jeana L Drake; Tali Mass; Liti Haramaty; Ehud Zelzion; Debashish Bhattacharya; Paul G Falkowski
Journal:  Proc Natl Acad Sci U S A       Date:  2013-02-19       Impact factor: 11.205

4.  Transcriptome and proteome analysis of Pinctada margaritifera calcifying mantle and shell: focus on biomineralization.

Authors:  Caroline Joubert; David Piquemal; Benjamin Marie; Laurent Manchon; Fabien Pierrat; Isabelle Zanella-Cléon; Nathalie Cochennec-Laureau; Yannick Gueguen; Caroline Montagnani
Journal:  BMC Genomics       Date:  2010-11-01       Impact factor: 3.969
  4 in total
  11 in total

1.  Reply to Ramos-Silva et al.: Regarding coral skeletal proteome.

Authors:  Jeana L Drake; Tali Massa; Liti Haramaty; Ehud Zelzion; Debashish Bhattacharya; Paul G Falkowski
Journal:  Proc Natl Acad Sci U S A       Date:  2013-06-11       Impact factor: 11.205

2.  Optimization of skeletal protein preparation for LC-MS/MS sequencing yields additional coral skeletal proteins in Stylophora pistillata.

Authors:  Yanai Peled; Jeana L Drake; Assaf Malik; Ricardo Almuly; Maya Lalzar; David Morgenstern; Tali Mass
Journal:  BMC Mater       Date:  2020-07-16

3.  An alternative and effective method for extracting skeletal organic matrix adapted to the red coral Corallium rubrum.

Authors:  Philippe Ganot; Guillaume Loentgen; Frédéric Marin; Laurent Plasseraud; Denis Allemand; Sylvie Tambutté
Journal:  Biol Open       Date:  2022-10-14       Impact factor: 2.643

4.  Characterization of the pigmented shell-forming proteome of the common grove snail Cepaea nemoralis.

Authors:  Karlheinz Mann; Daniel John Jackson
Journal:  BMC Genomics       Date:  2014-03-31       Impact factor: 3.969

5.  Insights from the Shell Proteome: Biomineralization to Adaptation.

Authors:  Jaison Arivalagan; Tejaswi Yarra; Benjamin Marie; Victoria A Sleight; Evelyne Duvernois-Berthet; Melody S Clark; Arul Marie; Sophie Berland
Journal:  Mol Biol Evol       Date:  2016-10-15       Impact factor: 16.240

6.  The skeletal proteome of the coral Acropora millepora: the evolution of calcification by co-option and domain shuffling.

Authors:  Paula Ramos-Silva; Jaap Kaandorp; Lotte Huisman; Benjamin Marie; Isabelle Zanella-Cléon; Nathalie Guichard; David J Miller; Frédéric Marin
Journal:  Mol Biol Evol       Date:  2013-06-12       Impact factor: 16.240

7.  The skeleton of the staghorn coral Acropora millepora: molecular and structural characterization.

Authors:  Paula Ramos-Silva; Jaap Kaandorp; Frédéric Herbst; Laurent Plasseraud; Gérard Alcaraz; Christine Stern; Marion Corneillat; Nathalie Guichard; Christophe Durlet; Gilles Luquet; Frédéric Marin
Journal:  PLoS One       Date:  2014-06-03       Impact factor: 3.240

8.  The Lottia gigantea shell matrix proteome: re-analysis including MaxQuant iBAQ quantitation and phosphoproteome analysis.

Authors:  Karlheinz Mann; Eric Edsinger
Journal:  Proteome Sci       Date:  2014-05-18       Impact factor: 2.480

9.  Stepwise Evolution of Coral Biomineralization Revealed with Genome-Wide Proteomics and Transcriptomics.

Authors:  Takeshi Takeuchi; Lixy Yamada; Chuya Shinzato; Hitoshi Sawada; Noriyuki Satoh
Journal:  PLoS One       Date:  2016-06-02       Impact factor: 3.240

10.  The Skeleton Forming Proteome of an Early Branching Metazoan: A Molecular Survey of the Biomineralization Components Employed by the Coralline Sponge Vaceletia Sp.

Authors:  Juliane Germer; Karlheinz Mann; Gert Wörheide; Daniel John Jackson
Journal:  PLoS One       Date:  2015-11-04       Impact factor: 3.240
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