Literature DB >> 23641116

The Fluid Mechanics of Genome Mapping.

Kevin D Dorfman1.   

Abstract

Entities:  

Keywords:  DNA barcoding; complex fluids; low Reynolds number flow; optical mapping

Year:  2013        PMID: 23641116      PMCID: PMC3638963          DOI: 10.1002/aic.14002

Source DB:  PubMed          Journal:  AIChE J        ISSN: 0001-1541            Impact factor:   3.993


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  51 in total

1.  An immersed boundary method for Brownian dynamics simulation of polymers in complex geometries: application to DNA flowing through a nanoslit with embedded nanopits.

Authors:  Yu Zhang; Juan J de Pablo; Michael D Graham
Journal:  J Chem Phys       Date:  2012-01-07       Impact factor: 3.488

2.  Conformation and dynamics of single DNA molecules in parallel-plate slit microchannels.

Authors:  Y-L Chen; M D Graham; J J de Pablo; G C Randall; M Gupta; P S Doyle
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2004-12-13

Review 3.  Structural variation in the human genome.

Authors:  Lars Feuk; Andrew R Carson; Stephen W Scherer
Journal:  Nat Rev Genet       Date:  2006-02       Impact factor: 53.242

4.  N log N method for hydrodynamic interactions of confined polymer systems: Brownian dynamics.

Authors:  Juan P Hernández-Ortiz; Juan J de Pablo; Michael D Graham
Journal:  J Chem Phys       Date:  2006-10-28       Impact factor: 3.488

5.  Adsorption of single DNA molecules at the water/fused-silica interface.

Authors:  Slavica Isailovic; Hung-Wing Li; Edward S Yeung
Journal:  J Chromatogr A       Date:  2006-10-19       Impact factor: 4.759

6.  DNA methylation profiling in nanochannels.

Authors:  Shuang Fang Lim; Alena Karpusenko; John J Sakon; Joseph A Hook; Tyra A Lamar; Robert Riehn
Journal:  Biomicrofluidics       Date:  2011-07-25       Impact factor: 2.800

7.  Single polymer dynamics in an elongational flow.

Authors:  T T Perkins; D E Smith; S Chu
Journal:  Science       Date:  1997-06-27       Impact factor: 47.728

8.  Simulation of DNA Extension in Nanochannels.

Authors:  Yanwei Wang; Douglas R Tree; Kevin D Dorfman
Journal:  Macromolecules       Date:  2011-08-23       Impact factor: 5.985

9.  Microfluidic extraction, stretching and analysis of human chromosomal DNA from single cells.

Authors:  Jaime J Benítez; Juraj Topolancik; Harvey C Tian; Christopher B Wallin; David R Latulippe; Kylan Szeto; Patrick J Murphy; Benjamin R Cipriany; Stephen L Levy; Paul D Soloway; Harold G Craighead
Journal:  Lab Chip       Date:  2012-11-21       Impact factor: 6.799

10.  Separation of yeast chromosome-sized DNAs by pulsed field gradient gel electrophoresis.

Authors:  D C Schwartz; C R Cantor
Journal:  Cell       Date:  1984-05       Impact factor: 41.582

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  3 in total

1.  Mesoscopic simulation of single DNA dynamics in rotational flows.

Authors:  S Kumar Ranjith
Journal:  Eur Phys J E Soft Matter       Date:  2015-08-28       Impact factor: 1.890

2.  Metrology of confined flows using wide field nanoparticle velocimetry.

Authors:  Hubert Ranchon; Vincent Picot; Aurélien Bancaud
Journal:  Sci Rep       Date:  2015-05-14       Impact factor: 4.379

3.  Stretching Wormlike Chains in Narrow Tubes of Arbitrary Cross-Sections.

Authors:  Ming Li; Jizeng Wang
Journal:  Polymers (Basel)       Date:  2019-12-10       Impact factor: 4.329

  3 in total

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