Literature DB >> 23637416

Immature and mature dengue serotype 1 virus structures provide insight into the maturation process.

Victor A Kostyuchenko1, Qian Zhang, Joanne L Tan, Thiam-Seng Ng, Shee-Mei Lok.   

Abstract

Dengue virus is a major human pathogen that has four serotypes (DENV1 to -4). Here we report the cryoelectron microscopy (cryo-EM) structures of immature and mature DENV1 at 6- and 4.5-Å resolution, respectively. The subnanometer-resolution maps allow accurate placement of all of the surface proteins. Although the immature and mature viruses showed vastly different surface protein organizations, the envelope protein transmembrane (E-TM) regions remain in similar positions. The pivotal role of the E-TM regions leads to the identification of the start and end positions of all surface proteins during maturation.

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Year:  2013        PMID: 23637416      PMCID: PMC3700294          DOI: 10.1128/JVI.00197-13

Source DB:  PubMed          Journal:  J Virol        ISSN: 0022-538X            Impact factor:   5.103


  28 in total

1.  Structure of dengue virus: implications for flavivirus organization, maturation, and fusion.

Authors:  Richard J Kuhn; Wei Zhang; Michael G Rossmann; Sergei V Pletnev; Jeroen Corver; Edith Lenches; Christopher T Jones; Suchetana Mukhopadhyay; Paul R Chipman; Ellen G Strauss; Timothy S Baker; James H Strauss
Journal:  Cell       Date:  2002-03-08       Impact factor: 41.582

2.  Binding of a neutralizing antibody to dengue virus alters the arrangement of surface glycoproteins.

Authors:  Shee-Mei Lok; Victor Kostyuchenko; Grant E Nybakken; Heather A Holdaway; Anthony J Battisti; Soila Sukupolvi-Petty; Dagmar Sedlak; Daved H Fremont; Paul R Chipman; John T Roehrig; Michael S Diamond; Richard J Kuhn; Michael G Rossmann
Journal:  Nat Struct Mol Biol       Date:  2008-02-10       Impact factor: 15.369

3.  Flexible fitting of atomic structures into electron microscopy maps using molecular dynamics.

Authors:  Leonardo G Trabuco; Elizabeth Villa; Kakoli Mitra; Joachim Frank; Klaus Schulten
Journal:  Structure       Date:  2008-05       Impact factor: 5.006

4.  The flavivirus precursor membrane-envelope protein complex: structure and maturation.

Authors:  Long Li; Shee-Mei Lok; I-Mei Yu; Ying Zhang; Richard J Kuhn; Jue Chen; Michael G Rossmann
Journal:  Science       Date:  2008-03-28       Impact factor: 47.728

5.  Structure of the immature dengue virus at low pH primes proteolytic maturation.

Authors:  I-Mei Yu; Wei Zhang; Heather A Holdaway; Long Li; Victor A Kostyuchenko; Paul R Chipman; Richard J Kuhn; Michael G Rossmann; Jue Chen
Journal:  Science       Date:  2008-03-28       Impact factor: 47.728

6.  Maturation of flaviviruses starts from one or more icosahedrally independent nucleation centres.

Authors:  Pavel Plevka; Anthony J Battisti; Jiraphan Junjhon; Dennis C Winkler; Heather A Holdaway; Poonsook Keelapang; Nopporn Sittisombut; Richard J Kuhn; Alasdair C Steven; Michael G Rossmann
Journal:  EMBO Rep       Date:  2011-05-13       Impact factor: 8.807

7.  Symmetry-restrained flexible fitting for symmetric EM maps.

Authors:  Kwok-Yan Chan; James Gumbart; Ryan McGreevy; Jean M Watermeyer; B Trevor Sewell; Klaus Schulten
Journal:  Structure       Date:  2011-09-07       Impact factor: 5.006

8.  Features and development of Coot.

Authors:  P Emsley; B Lohkamp; W G Scott; K Cowtan
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-03-24

9.  Type- and subcomplex-specific neutralizing antibodies against domain III of dengue virus type 2 envelope protein recognize adjacent epitopes.

Authors:  Soila Sukupolvi-Petty; S Kyle Austin; Whitney E Purtha; Theodore Oliphant; Grant E Nybakken; Jacob J Schlesinger; John T Roehrig; Gregory D Gromowski; Alan D Barrett; Daved H Fremont; Michael S Diamond
Journal:  J Virol       Date:  2007-09-19       Impact factor: 5.103

10.  Functional importance of dengue virus maturation: infectious properties of immature virions.

Authors:  Izabela A Zybert; Heidi van der Ende-Metselaar; Jan Wilschut; Jolanda M Smit
Journal:  J Gen Virol       Date:  2008-12       Impact factor: 3.891

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  68 in total

1.  Characterization of two engineered dimeric Zika virus envelope proteins as immunogens for neutralizing antibody selection and vaccine design.

Authors:  Chunpeng Yang; Fang Zeng; Xinyu Gao; Shaojuan Zhao; Xuan Li; Sheng Liu; Na Li; Chenglin Deng; Bo Zhang; Rui Gong
Journal:  J Biol Chem       Date:  2019-05-28       Impact factor: 5.157

2.  Atomic-level functional model of dengue virus Envelope protein infectivity.

Authors:  Elizabeth A Christian; Kristen M Kahle; Kimberly Mattia; Bridget A Puffer; Jennifer M Pfaff; Adam Miller; Cheryl Paes; Edgar Davidson; Benjamin J Doranz
Journal:  Proc Natl Acad Sci U S A       Date:  2013-10-24       Impact factor: 11.205

3.  Refinement and Analysis of the Mature Zika Virus Cryo-EM Structure at 3.1 Å Resolution.

Authors:  Madhumati Sevvana; Feng Long; Andrew S Miller; Thomas Klose; Geeta Buda; Lei Sun; Richard J Kuhn; Michael G Rossmann
Journal:  Structure       Date:  2018-06-26       Impact factor: 5.006

Review 4.  Biochemistry and Molecular Biology of Flaviviruses.

Authors:  Nicholas J Barrows; Rafael K Campos; Kuo-Chieh Liao; K Reddisiva Prasanth; Ruben Soto-Acosta; Shih-Chia Yeh; Geraldine Schott-Lerner; Julien Pompon; October M Sessions; Shelton S Bradrick; Mariano A Garcia-Blanco
Journal:  Chem Rev       Date:  2018-04-13       Impact factor: 60.622

5.  Flaviviruses have imperfect icosahedral symmetry.

Authors:  Matthew D Therkelsen; Thomas Klose; Frank Vago; Wen Jiang; Michael G Rossmann; Richard J Kuhn
Journal:  Proc Natl Acad Sci U S A       Date:  2018-10-22       Impact factor: 11.205

6.  Human antibodies stop dengue virus by jamming its mechanics.

Authors:  Shee-Mei Lok
Journal:  Proc Natl Acad Sci U S A       Date:  2014-01-17       Impact factor: 11.205

Review 7.  Mapping the diverse structural landscape of the flavivirus antibody repertoire.

Authors:  Madhumati Sevvana; Richard J Kuhn
Journal:  Curr Opin Virol       Date:  2020-08-13       Impact factor: 7.090

Review 8.  Atomic cryo-EM structures of viruses.

Authors:  Wen Jiang; Liang Tang
Journal:  Curr Opin Struct Biol       Date:  2017-08-05       Impact factor: 6.809

9.  A Single Amino Acid Substitution in the M Protein Attenuates Japanese Encephalitis Virus in Mammalian Hosts.

Authors:  Mélissanne de Wispelaere; Cécile Khou; Marie-Pascale Frenkiel; Philippe Desprès; Nathalie Pardigon
Journal:  J Virol       Date:  2015-12-09       Impact factor: 5.103

10.  Structure of the thermally stable Zika virus.

Authors:  Victor A Kostyuchenko; Elisa X Y Lim; Shuijun Zhang; Guntur Fibriansah; Thiam-Seng Ng; Justin S G Ooi; Jian Shi; Shee-Mei Lok
Journal:  Nature       Date:  2016-04-19       Impact factor: 49.962

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