Literature DB >> 23634107

Methyl (2Z)-2-bromo-methyl-3-(2,4-dichloro-phen-yl)prop-2-enoate.

K Swaminathan1, K Sethusankar, Anthonisamy Devaraj, Manickam Bakthadoss.   

Abstract

In the title compound C11H9BrCl2O2, which represents the Z isomer, the methyl-acrylate moiety is essentially planar within 0.039 (2) Å and has an extended trans configuration. The benzene ring makes a dihedral angle of 28.3 (1)° with the mean plane of the methyl-acrylate moiety. The crystal packing is characterized by C-H⋯O hydrogen bonding and halogen-halogen inter-actions [Cl⋯Cl = 3.486 (3) Å], resulting in the formation of R 2 (2)(11) ring motifs and connecting the mol-ecules into chains propagating along the b axis.

Entities:  

Year:  2013        PMID: 23634107      PMCID: PMC3629620          DOI: 10.1107/S1600536813007368

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the uses of cinnamic acid and its derivatives, see: Xiao et al. (2008 ▶); De Fraine & Martin (1991 ▶). For the extended conformation of acrylate, see: Schweizer & Dunitz (1982 ▶). For a related structure, see: Karthikeyan et al. (2012 ▶). For graph-set notation, see: Bernstein et al. (1995 ▶). For type I halogen inter­actions, see: Johnson & Lemmerer (2012 ▶); Schmidt et al. (2011 ▶).

Experimental

Crystal data

C11H9BrCl2O2 M = 323.99 Triclinic, a = 7.9174 (3) Å b = 8.8032 (3) Å c = 9.3585 (3) Å α = 78.374 (2)° β = 86.599 (2)° γ = 73.528 (2)° V = 612.67 (4) Å3 Z = 2 Mo Kα radiation μ = 3.77 mm−1 T = 293 K 0.25 × 0.25 × 0.20 mm

Data collection

Bruker Kappa APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2008 ▶) T min = 0.405, T max = 0.470 16418 measured reflections 3748 independent reflections 2262 reflections with I > 2σ(I) R int = 0.033

Refinement

R[F 2 > 2σ(F 2)] = 0.037 wR(F 2) = 0.102 S = 1.00 3748 reflections 146 parameters H-atom parameters constrained Δρmax = 0.59 e Å−3 Δρmin = −0.29 e Å−3 Data collection: APEX2 (Bruker, 2008 ▶); cell refinement: SAINT (Bruker, 2008 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▶) and Mercury (Macrae et al., 2008 ▶); software used to prepare material for publication: SHELXL97 and PLATON (Spek, 2009 ▶). Click here for additional data file. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536813007368/ld2096sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813007368/ld2096Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536813007368/ld2096Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C11H9BrCl2O2Z = 2
Mr = 323.99F(000) = 320
Triclinic, P1Dx = 1.756 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 7.9174 (3) ÅCell parameters from 3748 reflections
b = 8.8032 (3) Åθ = 2.2–30.6°
c = 9.3585 (3) ŵ = 3.77 mm1
α = 78.374 (2)°T = 293 K
β = 86.599 (2)°Block, yellow
γ = 73.528 (2)°0.25 × 0.25 × 0.20 mm
V = 612.67 (4) Å3
Bruker Kappa APEXII CCD diffractometer3748 independent reflections
Radiation source: fine-focus sealed tube2262 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.033
ω and φ scansθmax = 30.6°, θmin = 2.2°
Absorption correction: multi-scan (SADABS; Bruker, 2008)h = −11→11
Tmin = 0.405, Tmax = 0.470k = −12→12
16418 measured reflectionsl = −13→13
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.037Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.102H-atom parameters constrained
S = 1.00w = 1/[σ2(Fo2) + (0.0538P)2 + 0.0238P] where P = (Fo2 + 2Fc2)/3
3748 reflections(Δ/σ)max = 0.005
146 parametersΔρmax = 0.59 e Å3
0 restraintsΔρmin = −0.29 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.2787 (3)0.5411 (3)−0.0226 (3)0.0472 (6)
H10.24840.52240.07560.057*
C20.3057 (3)0.4177 (3)−0.0979 (3)0.0485 (6)
H20.29350.3175−0.05130.058*
C30.3509 (3)0.4437 (3)−0.2424 (3)0.0456 (6)
C40.3696 (3)0.5905 (3)−0.3132 (3)0.0449 (5)
H40.40010.6071−0.41150.054*
C50.3424 (3)0.7123 (3)−0.2360 (2)0.0409 (5)
C60.2948 (3)0.6937 (3)−0.0878 (2)0.0402 (5)
C70.2786 (3)0.8231 (3)−0.0076 (2)0.0424 (5)
H70.35050.8903−0.04030.051*
C80.1750 (3)0.8592 (3)0.1064 (2)0.0416 (5)
C90.1931 (3)0.9985 (3)0.1650 (3)0.0457 (6)
C100.1030 (4)1.1546 (4)0.3480 (3)0.0701 (9)
H10A0.22271.14380.37180.105*
H10B0.03241.15640.43490.105*
H10C0.05851.25340.27920.105*
C110.0395 (3)0.7785 (3)0.1709 (3)0.0468 (6)
H11A0.00340.72950.09830.056*
H11B−0.06300.85900.19710.056*
O10.2835 (3)1.0836 (2)0.1128 (2)0.0692 (6)
O20.0964 (3)1.0191 (2)0.2845 (2)0.0595 (5)
Cl10.38993 (11)0.28780 (9)−0.33786 (9)0.0670 (2)
Cl20.36663 (10)0.89643 (7)−0.32891 (7)0.05947 (19)
Br10.12451 (4)0.61222 (3)0.34428 (3)0.06038 (13)
U11U22U33U12U13U23
C10.0551 (14)0.0448 (14)0.0415 (13)−0.0184 (12)0.0036 (11)−0.0025 (11)
C20.0534 (14)0.0381 (12)0.0556 (15)−0.0199 (11)0.0025 (11)−0.0029 (11)
C30.0462 (13)0.0407 (13)0.0532 (14)−0.0157 (11)0.0046 (11)−0.0124 (11)
C40.0493 (13)0.0464 (14)0.0414 (12)−0.0179 (11)0.0048 (10)−0.0085 (11)
C50.0454 (12)0.0358 (12)0.0416 (12)−0.0158 (10)0.0019 (10)−0.0019 (10)
C60.0416 (12)0.0376 (12)0.0413 (12)−0.0122 (10)0.0002 (9)−0.0059 (10)
C70.0494 (13)0.0381 (12)0.0404 (12)−0.0159 (10)−0.0009 (10)−0.0036 (10)
C80.0465 (12)0.0391 (12)0.0363 (12)−0.0106 (10)−0.0047 (10)−0.0009 (10)
C90.0576 (14)0.0415 (13)0.0359 (12)−0.0124 (11)−0.0025 (10)−0.0038 (10)
C100.079 (2)0.0678 (19)0.072 (2)−0.0185 (16)0.0056 (16)−0.0375 (17)
C110.0469 (13)0.0488 (14)0.0442 (13)−0.0151 (11)−0.0003 (10)−0.0054 (11)
O10.1119 (17)0.0591 (12)0.0510 (11)−0.0479 (12)0.0175 (11)−0.0140 (9)
O20.0707 (12)0.0581 (12)0.0577 (12)−0.0226 (10)0.0141 (9)−0.0268 (10)
Cl10.0846 (5)0.0527 (4)0.0762 (5)−0.0307 (4)0.0176 (4)−0.0297 (4)
Cl20.0858 (5)0.0439 (3)0.0512 (4)−0.0290 (3)0.0154 (3)−0.0039 (3)
Br10.0792 (2)0.0610 (2)0.04088 (16)−0.02708 (15)0.00521 (12)−0.00037 (12)
C1—C21.371 (4)C7—H70.9300
C1—C61.397 (3)C8—C111.484 (3)
C1—H10.9300C8—C91.485 (3)
C2—C31.369 (4)C9—O11.195 (3)
C2—H20.9300C9—O21.331 (3)
C3—C41.372 (3)C10—O21.451 (3)
C3—Cl11.731 (3)C10—H10A0.9600
C4—C51.372 (3)C10—H10B0.9600
C4—H40.9300C10—H10C0.9600
C5—C61.404 (3)C11—Br11.961 (2)
C5—Cl21.735 (2)C11—H11A0.9700
C6—C71.459 (3)C11—H11B0.9700
C7—C81.340 (3)
C2—C1—C6122.5 (2)C6—C7—H7115.3
C2—C1—H1118.7C7—C8—C11125.5 (2)
C6—C1—H1118.7C7—C8—C9115.8 (2)
C3—C2—C1119.2 (2)C11—C8—C9118.6 (2)
C3—C2—H2120.4O1—C9—O2122.9 (2)
C1—C2—H2120.4O1—C9—C8124.8 (2)
C2—C3—C4121.3 (2)O2—C9—C8112.3 (2)
C2—C3—Cl1119.7 (2)O2—C10—H10A109.5
C4—C3—Cl1118.97 (19)O2—C10—H10B109.5
C5—C4—C3118.6 (2)H10A—C10—H10B109.5
C5—C4—H4120.7O2—C10—H10C109.5
C3—C4—H4120.7H10A—C10—H10C109.5
C4—C5—C6122.9 (2)H10B—C10—H10C109.5
C4—C5—Cl2117.39 (18)C8—C11—Br1112.60 (15)
C6—C5—Cl2119.75 (18)C8—C11—H11A109.1
C1—C6—C5115.5 (2)Br1—C11—H11A109.1
C1—C6—C7123.4 (2)C8—C11—H11B109.1
C5—C6—C7120.9 (2)Br1—C11—H11B109.1
C8—C7—C6129.4 (2)H11A—C11—H11B107.8
C8—C7—H7115.3C9—O2—C10116.2 (2)
C6—C1—C2—C30.2 (4)C1—C6—C7—C8−34.5 (4)
C1—C2—C3—C40.0 (4)C5—C6—C7—C8150.7 (2)
C1—C2—C3—Cl1178.65 (19)C6—C7—C8—C11−5.0 (4)
C2—C3—C4—C50.1 (4)C6—C7—C8—C9178.8 (2)
Cl1—C3—C4—C5−178.53 (18)C7—C8—C9—O14.7 (4)
C3—C4—C5—C6−0.5 (4)C11—C8—C9—O1−171.8 (2)
C3—C4—C5—Cl2−179.85 (18)C7—C8—C9—O2−175.2 (2)
C2—C1—C6—C5−0.5 (4)C11—C8—C9—O28.4 (3)
C2—C1—C6—C7−175.6 (2)C7—C8—C11—Br198.2 (2)
C4—C5—C6—C10.7 (3)C9—C8—C11—Br1−85.7 (2)
Cl2—C5—C6—C1−179.97 (18)O1—C9—O2—C101.3 (4)
C4—C5—C6—C7175.9 (2)C8—C9—O2—C10−178.8 (2)
Cl2—C5—C6—C7−4.7 (3)
D—H···AD—HH···AD···AD—H···A
C2—H2···O1i0.932.333.238 (3)167
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
C2—H2⋯O1i 0.932.333.238 (3)167

Symmetry code: (i) .

  6 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Enamines as novel antibacterials and their structure-activity relationships.

Authors:  Zhu-Ping Xiao; Rui-Qin Fang; Huan-Qiu Li; Jia-Yu Xue; Yi Zheng; Hai-Liang Zhu
Journal:  Eur J Med Chem       Date:  2007-12-08       Impact factor: 6.514

3.  (E)-Methyl 2-benzyl-3-o-tolyl-acrylate.

Authors:  S Karthikeyan; K Sethusankar; Anthonisamy Devaraj; Manickam Bakthadoss
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-04-04

4.  5,7-Dibromo-2-methyl-quinolin-8-ol.

Authors:  Nicole Schmidt; Anke Schwarzer; Edwin Weber
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-03-05

5.  3-Bromo-pyridin-2-amine.

Authors:  Marcelle Johnson; Andreas Lemmerer
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-01-14

6.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  6 in total
  1 in total

1.  Methyl (2Z)-2-bromo-meth-yl-3-(3-chloro-phen-yl)prop-2-enoate.

Authors:  K Swaminathan; K Sethusankar; Raman Selvakumar; Manickam Bakthadoss
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-05-11
  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.