Literature DB >> 23634034

3-Amino-1-(4-fluoro-phen-yl)-7-meth-oxy-1H-benzo[f]chromene-2-carbonitrile.

Abd El-Galil E Amr1, Ahmed M El-Agrody, Mohamed A Al-Omar, Seik Weng Ng, Edward R T Tiekink.   

Abstract

In the title compound, C21H15FN2O2, the n class="Chemical">furan ring has a flattened half-chair conformation [the methine C atom lies 0.136 (2) Å above the C5 plane which has an r.m.s. deviation of 0.0229 Å]. Overall, the 1H-benzo[f]chromene fused-ring system approximates a plane (r.m.s. deviation of the 14 non-H atoms = 0.049 Å). The fluoro-benzene ring is almost perpendicular to this plane [dihedral angle = 89.58 (8)°]. Zigzag supra-molecular tapes along the b axis are the most notable feature of the crystal packing. This arises through an alternating sequence of 12-membered {⋯HNC3N}2 and eight-membered {⋯HNCO}2 synthons. These are connected into a three-dimensional architecture by π-π [inter-centroid distance for centrosymmetrically related fluoro-benzene rings = 3.5181 (10) Å] and C-H⋯π inter-actions.

Entities:  

Year:  2013        PMID: 23634034      PMCID: PMC3629516          DOI: 10.1107/S1600536813005473

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For a related structure and background to 4H-chromene derivatives, see: El-Agrody et al. (2013 ▶). For related structures, see: Wang et al. (2008 ▶); Shekhar et al. (2012 ▶);

Experimental

Crystal data

C21H15FN2O2 M = 346.35 Triclinic, a = 8.7798 (9) Å b = 9.6329 (6) Å c = 10.9130 (11) Å α = 77.074 (7)° β = 68.414 (10)° γ = 87.083 (7)° V = 835.99 (13) Å3 Z = 2 Mo Kα radiation μ = 0.10 mm−1 T = 295 K 0.30 × 0.30 × 0.10 mm

Data collection

Agilent SuperNova Dual diffractometer with an Atlas detector Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2011 ▶) T min = 0.821, T max = 1.000 7587 measured reflections 3868 independent reflections 2569 reflections with I > 2σ(I) R int = 0.029

Refinement

R[F 2 > 2σ(F 2)] = 0.052 wR(F 2) = 0.145 S = 1.02 3868 reflections 244 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.19 e Å−3 Δρmin = −0.16 e Å−3 Data collection: CrysAlis PRO (Agilent, 2011 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▶) and DIAMOND (Brandenburg, 2006 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Click here for additional data file. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536813005473/hb7049sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813005473/hb7049Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536813005473/hb7049Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C21H15FN2O2Z = 2
Mr = 346.35F(000) = 360
Triclinic, P1Dx = 1.376 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 8.7798 (9) ÅCell parameters from 1958 reflections
b = 9.6329 (6) Åθ = 3.1–27.5°
c = 10.9130 (11) ŵ = 0.10 mm1
α = 77.074 (7)°T = 295 K
β = 68.414 (10)°Prism, light-brown
γ = 87.083 (7)°0.30 × 0.30 × 0.10 mm
V = 835.99 (13) Å3
Agilent SuperNova Dual diffractometer with an Atlas detector3868 independent reflections
Radiation source: SuperNova (Mo) X-ray Source2569 reflections with I > 2σ(I)
Mirror monochromatorRint = 0.029
Detector resolution: 10.4041 pixels mm-1θmax = 27.6°, θmin = 3.1°
ω scanh = −8→11
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2011)k = −12→12
Tmin = 0.821, Tmax = 1.000l = −13→14
7587 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.052H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.145w = 1/[σ2(Fo2) + (0.0577P)2 + 0.1106P] where P = (Fo2 + 2Fc2)/3
S = 1.02(Δ/σ)max < 0.001
3868 reflectionsΔρmax = 0.19 e Å3
244 parametersΔρmin = −0.16 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.011 (3)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
F10.2857 (2)0.90095 (14)1.15726 (13)0.0943 (5)
O10.77412 (14)0.54184 (11)0.57793 (13)0.0452 (3)
O2−0.11449 (16)0.62729 (15)0.84385 (16)0.0692 (5)
N10.97391 (19)0.70744 (19)0.49939 (18)0.0537 (5)
H11.020 (3)0.790 (2)0.492 (2)0.078 (7)*
H21.030 (3)0.633 (3)0.480 (2)0.080 (7)*
N20.7893 (2)1.04350 (16)0.51621 (19)0.0677 (6)
C10.6096 (2)0.49698 (16)0.62727 (16)0.0366 (4)
C20.5869 (2)0.35217 (16)0.63298 (17)0.0414 (4)
H2A0.67660.29580.60400.050*
C30.4316 (2)0.29574 (17)0.68165 (17)0.0446 (4)
H30.41560.19960.68690.054*
C40.2945 (2)0.38016 (17)0.72431 (17)0.0414 (4)
C50.1313 (3)0.3245 (2)0.7744 (2)0.0564 (5)
H50.11330.22850.78070.068*
C60.0011 (3)0.4075 (2)0.8134 (2)0.0633 (6)
H6−0.10470.36810.84690.076*
C70.0254 (2)0.5534 (2)0.8034 (2)0.0513 (5)
C80.1808 (2)0.61196 (18)0.75438 (18)0.0441 (4)
H80.19570.70890.74650.053*
C90.3190 (2)0.52689 (16)0.71562 (16)0.0372 (4)
C100.4828 (2)0.58616 (15)0.66581 (15)0.0343 (4)
C110.51257 (19)0.74259 (15)0.65506 (16)0.0351 (4)
H110.45410.79770.60020.042*
C120.6944 (2)0.78082 (15)0.58154 (16)0.0373 (4)
C130.8109 (2)0.68330 (16)0.55414 (17)0.0392 (4)
C14−0.0958 (3)0.7740 (2)0.8413 (3)0.0734 (7)
H14A−0.20180.81300.87660.110*
H14B−0.03910.82470.75000.110*
H14C−0.03380.78320.89570.110*
C150.44924 (19)0.78420 (15)0.79176 (16)0.0370 (4)
C160.3506 (2)0.89994 (17)0.8121 (2)0.0509 (5)
H160.32060.95160.74210.061*
C170.2955 (3)0.9403 (2)0.9351 (2)0.0634 (6)
H170.22951.01830.94830.076*
C180.3407 (3)0.8624 (2)1.0362 (2)0.0575 (6)
C190.4377 (3)0.7473 (2)1.02070 (19)0.0548 (5)
H190.46700.69631.09130.066*
C200.4910 (2)0.70854 (18)0.89766 (17)0.0454 (4)
H200.55640.62990.88580.054*
C210.7466 (2)0.92564 (17)0.54616 (18)0.0441 (4)
U11U22U33U12U13U23
F10.1272 (14)0.0935 (10)0.0578 (8)0.0132 (9)−0.0173 (8)−0.0393 (7)
O10.0329 (7)0.0349 (6)0.0654 (8)0.0018 (5)−0.0135 (6)−0.0140 (5)
O20.0339 (7)0.0678 (9)0.1011 (12)−0.0024 (6)−0.0146 (8)−0.0258 (8)
N10.0325 (9)0.0453 (9)0.0791 (12)−0.0011 (7)−0.0103 (8)−0.0220 (8)
N20.0572 (11)0.0378 (9)0.0939 (14)−0.0085 (7)−0.0128 (10)−0.0095 (8)
C10.0352 (9)0.0358 (8)0.0379 (9)−0.0014 (6)−0.0123 (7)−0.0075 (6)
C20.0444 (10)0.0335 (8)0.0458 (10)0.0038 (7)−0.0160 (8)−0.0093 (7)
C30.0556 (12)0.0310 (8)0.0483 (10)−0.0068 (7)−0.0209 (9)−0.0059 (7)
C40.0446 (10)0.0375 (9)0.0418 (9)−0.0071 (7)−0.0171 (8)−0.0043 (7)
C50.0511 (12)0.0434 (10)0.0715 (13)−0.0151 (8)−0.0205 (10)−0.0060 (9)
C60.0401 (11)0.0596 (12)0.0834 (15)−0.0168 (9)−0.0165 (11)−0.0085 (10)
C70.0355 (10)0.0569 (11)0.0599 (12)−0.0041 (8)−0.0149 (9)−0.0125 (9)
C80.0373 (10)0.0430 (9)0.0520 (11)−0.0034 (7)−0.0156 (8)−0.0107 (7)
C90.0376 (9)0.0387 (9)0.0361 (9)−0.0049 (7)−0.0151 (7)−0.0060 (6)
C100.0355 (9)0.0332 (8)0.0346 (8)−0.0020 (6)−0.0130 (7)−0.0074 (6)
C110.0303 (8)0.0328 (8)0.0418 (9)0.0004 (6)−0.0130 (7)−0.0076 (6)
C120.0353 (9)0.0321 (8)0.0420 (9)−0.0023 (6)−0.0114 (7)−0.0076 (7)
C130.0361 (9)0.0343 (8)0.0459 (10)−0.0027 (7)−0.0122 (8)−0.0104 (7)
C140.0436 (12)0.0753 (15)0.1080 (19)0.0078 (10)−0.0225 (12)−0.0435 (13)
C150.0321 (8)0.0325 (8)0.0435 (9)−0.0049 (6)−0.0092 (7)−0.0095 (7)
C160.0594 (12)0.0367 (9)0.0555 (11)0.0048 (8)−0.0190 (9)−0.0122 (8)
C170.0748 (16)0.0451 (11)0.0654 (14)0.0113 (9)−0.0140 (11)−0.0251 (9)
C180.0646 (14)0.0588 (12)0.0443 (11)−0.0064 (10)−0.0069 (10)−0.0220 (9)
C190.0575 (13)0.0618 (12)0.0440 (11)−0.0024 (9)−0.0169 (9)−0.0110 (9)
C200.0409 (10)0.0473 (10)0.0469 (10)0.0013 (7)−0.0142 (8)−0.0115 (8)
C210.0345 (9)0.0397 (9)0.0531 (10)−0.0008 (7)−0.0099 (8)−0.0106 (7)
F1—C181.359 (2)C8—C91.414 (2)
O1—C131.3613 (18)C8—H80.9300
O1—C11.3966 (19)C9—C101.434 (2)
O2—C71.365 (2)C10—C111.514 (2)
O2—C141.424 (2)C11—C121.521 (2)
N1—C131.343 (2)C11—C151.526 (2)
N1—H10.89 (2)C11—H110.9800
N1—H20.87 (2)C12—C131.349 (2)
N2—C211.151 (2)C12—C211.414 (2)
C1—C101.369 (2)C14—H14A0.9600
C1—C21.403 (2)C14—H14B0.9600
C2—C31.360 (2)C14—H14C0.9600
C2—H2A0.9300C15—C201.382 (2)
C3—C41.409 (3)C15—C161.383 (2)
C3—H30.9300C16—C171.387 (3)
C4—C51.418 (2)C16—H160.9300
C4—C91.417 (2)C17—C181.363 (3)
C5—C61.352 (3)C17—H170.9300
C5—H50.9300C18—C191.366 (3)
C6—C71.405 (3)C19—C201.380 (2)
C6—H60.9300C19—H190.9300
C7—C81.369 (2)C20—H200.9300
C13—O1—C1118.63 (12)C10—C11—C15113.09 (12)
C7—O2—C14117.06 (15)C12—C11—C15110.77 (13)
C13—N1—H1122.0 (15)C10—C11—H11107.8
C13—N1—H2114.6 (16)C12—C11—H11107.8
H1—N1—H2123 (2)C15—C11—H11107.8
C10—C1—O1123.09 (14)C13—C12—C21117.59 (15)
C10—C1—C2123.33 (16)C13—C12—C11123.60 (13)
O1—C1—C2113.58 (14)C21—C12—C11118.71 (14)
C3—C2—C1118.86 (16)N1—C13—C12127.20 (15)
C3—C2—H2A120.6N1—C13—O1110.29 (14)
C1—C2—H2A120.6C12—C13—O1122.50 (15)
C2—C3—C4121.27 (15)O2—C14—H14A109.5
C2—C3—H3119.4O2—C14—H14B109.5
C4—C3—H3119.4H14A—C14—H14B109.5
C3—C4—C5122.50 (16)O2—C14—H14C109.5
C3—C4—C9119.31 (16)H14A—C14—H14C109.5
C5—C4—C9118.18 (17)H14B—C14—H14C109.5
C6—C5—C4121.72 (17)C20—C15—C16118.34 (16)
C6—C5—H5119.1C20—C15—C11120.85 (15)
C4—C5—H5119.1C16—C15—C11120.80 (16)
C5—C6—C7120.09 (18)C15—C16—C17121.12 (19)
C5—C6—H6120.0C15—C16—H16119.4
C7—C6—H6120.0C17—C16—H16119.4
O2—C7—C8124.64 (17)C18—C17—C16118.26 (18)
O2—C7—C6115.14 (17)C18—C17—H17120.9
C8—C7—C6120.21 (18)C16—C17—H17120.9
C7—C8—C9120.80 (16)F1—C18—C19119.1 (2)
C7—C8—H8119.6F1—C18—C17118.35 (19)
C9—C8—H8119.6C19—C18—C17122.58 (18)
C8—C9—C4118.98 (15)C18—C19—C20118.36 (19)
C8—C9—C10121.54 (15)C18—C19—H19120.8
C4—C9—C10119.47 (15)C20—C19—H19120.8
C1—C10—C9117.74 (14)C15—C20—C19121.33 (17)
C1—C10—C11121.65 (14)C15—C20—H20119.3
C9—C10—C11120.61 (14)C19—C20—H20119.3
C10—C11—C12109.49 (13)N2—C21—C12179.4 (2)
C13—O1—C1—C10−6.8 (2)C4—C9—C10—C11179.82 (14)
C13—O1—C1—C2172.96 (14)C1—C10—C11—C127.1 (2)
C10—C1—C2—C3−1.4 (3)C9—C10—C11—C12−172.08 (14)
O1—C1—C2—C3178.88 (15)C1—C10—C11—C15−116.92 (17)
C1—C2—C3—C40.8 (3)C9—C10—C11—C1563.9 (2)
C2—C3—C4—C5179.49 (17)C10—C11—C12—C13−11.2 (2)
C2—C3—C4—C90.3 (3)C15—C11—C12—C13114.20 (18)
C3—C4—C5—C6−179.2 (2)C10—C11—C12—C21172.48 (15)
C9—C4—C5—C60.0 (3)C15—C11—C12—C21−62.1 (2)
C4—C5—C6—C70.7 (4)C21—C12—C13—N11.9 (3)
C14—O2—C7—C8−3.6 (3)C11—C12—C13—N1−174.45 (18)
C14—O2—C7—C6177.17 (19)C21—C12—C13—O1−176.76 (15)
C5—C6—C7—O2179.2 (2)C11—C12—C13—O16.9 (3)
C5—C6—C7—C8−0.1 (3)C1—O1—C13—N1−176.14 (15)
O2—C7—C8—C9179.56 (18)C1—O1—C13—C122.7 (2)
C6—C7—C8—C9−1.2 (3)C10—C11—C15—C2051.2 (2)
C7—C8—C9—C41.9 (3)C12—C11—C15—C20−72.18 (18)
C7—C8—C9—C10−179.13 (17)C10—C11—C15—C16−129.82 (17)
C3—C4—C9—C8177.90 (16)C12—C11—C15—C16106.85 (18)
C5—C4—C9—C8−1.3 (3)C20—C15—C16—C170.5 (3)
C3—C4—C9—C10−1.1 (2)C11—C15—C16—C17−178.57 (17)
C5—C4—C9—C10179.75 (16)C15—C16—C17—C18−0.2 (3)
O1—C1—C10—C9−179.64 (14)C16—C17—C18—F1−179.39 (18)
C2—C1—C10—C90.6 (3)C16—C17—C18—C190.1 (3)
O1—C1—C10—C111.1 (3)F1—C18—C19—C20179.25 (17)
C2—C1—C10—C11−178.59 (15)C17—C18—C19—C20−0.2 (3)
C8—C9—C10—C1−178.36 (16)C16—C15—C20—C19−0.6 (3)
C4—C9—C10—C10.6 (2)C11—C15—C20—C19178.43 (16)
C8—C9—C10—C110.9 (3)C18—C19—C20—C150.5 (3)
D—H···AD—HH···AD···AD—H···A
N1—H1···N2i0.89 (2)2.34 (3)3.189 (2)160 (2)
N1—H2···O1ii0.87 (2)2.36 (3)3.219 (2)169 (2)
C19—H19···Cg1iii0.932.903.831 (2)174
Table 1

Hydrogen-bond geometry (Å, °)

Cg1 is the centroid of the C15–CC20 ring.

D—H⋯A D—HH⋯A DA D—H⋯A
N1—H1⋯N2i 0.89 (2)2.34 (3)3.189 (2)160 (2)
N1—H2⋯O1ii 0.87 (2)2.36 (3)3.219 (2)169 (2)
C19—H19⋯Cg1iii 0.932.903.831 (2)174

Symmetry codes: (i) ; (ii) ; (iii) .

  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  3-Amino-1-(4-fluoro-phen-yl)-8-meth-oxy-1H-benzo[f]chromene-2-carbonitrile.

Authors:  Ahmed M El-Agrody; Mohamed A Al-Omar; Abd El-Galil E Amr; Seik Weng Ng; Edward R T Tiekink
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-03-02
  2 in total
  1 in total

1.  3-Amino-1-(4-fluoro-phen-yl)-8-meth-oxy-1H-benzo[f]chromene-2-carbonitrile.

Authors:  Ahmed M El-Agrody; Mohamed A Al-Omar; Abd El-Galil E Amr; Seik Weng Ng; Edward R T Tiekink
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-03-02
  1 in total

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