Literature DB >> 23634029

Phenazin-5-ium hydrogen sulfate monohydrate.

Joseph Degeorge1, Christopher P Landee, Mark M Turnbull.   

Abstract

The crystal structure of the title salt, C12H9N2 (+)·HSO4 (-)·H2O, comprises inversion-related pairs of phenazinium ions linked by C-H⋯N hydrogen bonds. The phenazinium N-H atoms are hydrogen bonded to the bis-ulfate anions. The bis-ulfate anions and water mol-ecules are linked by O-H⋯O hydrogen-bonding inter-actions into a structural ladder motif parallel to the a axis.

Entities:  

Year:  2013        PMID: 23634029      PMCID: PMC3629511          DOI: 10.1107/S160053681300562X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures, see: Sieroń (2007 ▶) [phenazinium perchlorate]; Plasseraud et al. (2009 ▶) [phenazinium trifluoro­methane­sulfonate]; Braga et al. (2010 ▶) [phenazinium chloride and phenazine monohydrate]; G.-X. Zhang et al. (2012 ▶) [phenazinium bromide]; N.-Q. Zhang et al. (2012 ▶) [phenazinium methane­sulfonate]. For copper(II) salts of phenazine, see: Schneider et al. (2007 ▶). For graph-set analysis of hydrogen bonding, see: Bernstein et al. (1995 ▶).

Experimental

Crystal data

C12H9N2 +·HSO4 −·H2O M = 296.30 Triclinic, a = 5.6565 (4) Å b = 10.4019 (6) Å c = 10.9500 (5) Å α = 89.693 (4)° β = 87.202 (5)° γ = 76.412 (5)° V = 625.49 (6) Å3 Z = 2 Cu Kα radiation μ = 2.53 mm−1 T = 120 K 0.45 × 0.40 × 0.30 mm

Data collection

Agilent SuperNova (Dual, Cu at zero, Atlas) diffractometer Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2011 ▶) T min = 0.786, T max = 1.000 3789 measured reflections 2341 independent reflections 2276 reflections with I > 2σ(I) R int = 0.013

Refinement

R[F 2 > 2σ(F 2)] = 0.032 wR(F 2) = 0.088 S = 1.09 2341 reflections 193 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.30 e Å−3 Δρmin = −0.39 e Å−3 Data collection: CrysAlis PRO (Agilent, 2011 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL and Mercury (Macrae et al., 2008 ▶); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008 ▶), enCIFer (Allen et al., 2004 ▶) and publCIF (Westrip, 2010 ▶). Click here for additional data file. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S160053681300562X/sj5299sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S160053681300562X/sj5299Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S160053681300562X/sj5299Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C12H9N2+·HSO4·H2OZ = 2
Mr = 296.30F(000) = 308
Triclinic, P1Dx = 1.573 Mg m3
Hall symbol: -P 1Cu Kα radiation, λ = 1.54184 Å
a = 5.6565 (4) ÅCell parameters from 3015 reflections
b = 10.4019 (6) Åθ = 4.0–73.7°
c = 10.9500 (5) ŵ = 2.53 mm1
α = 89.693 (4)°T = 120 K
β = 87.202 (5)°Prism, red
γ = 76.412 (5)°0.45 × 0.40 × 0.30 mm
V = 625.49 (6) Å3
Agilent SuperNova (Dual, Cu at zero, Atlas) diffractometer2341 independent reflections
Radiation source: SuperNova (Cu) X-ray Source2276 reflections with I > 2σ(I)
Mirror monochromatorRint = 0.013
Detector resolution: 10.6501 pixels mm-1θmax = 70.1°, θmin = 4.0°
ω scansh = −6→6
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2011)k = −12→12
Tmin = 0.786, Tmax = 1.000l = −13→10
3789 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.032Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.088H atoms treated by a mixture of independent and constrained refinement
S = 1.09w = 1/[σ2(Fo2) + (0.0466P)2 + 0.3904P] where P = (Fo2 + 2Fc2)/3
2341 reflections(Δ/σ)max < 0.001
193 parametersΔρmax = 0.30 e Å3
0 restraintsΔρmin = −0.39 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
N1−0.2593 (2)0.82964 (13)0.67912 (12)0.0146 (3)
H1−0.121 (4)0.782 (2)0.6983 (18)0.018*
C2−0.3721 (3)0.78622 (15)0.58835 (14)0.0147 (3)
C3−0.2635 (3)0.66885 (16)0.52306 (15)0.0196 (3)
H3−0.11040.61940.54200.024*
C4−0.3861 (3)0.62898 (17)0.43183 (15)0.0223 (4)
H4−0.31610.55140.38900.027*
C5−0.6203 (3)0.70454 (17)0.40110 (15)0.0217 (4)
H5−0.69990.67600.33790.026*
C6−0.7286 (3)0.81763 (17)0.46292 (15)0.0192 (3)
H6−0.88100.86600.44160.023*
C7−0.6090 (3)0.86222 (15)0.56042 (14)0.0152 (3)
N8−0.7194 (2)0.97138 (13)0.62387 (12)0.0170 (3)
C9−0.6022 (3)1.00957 (15)0.71603 (14)0.0156 (3)
C10−0.7157 (3)1.12367 (16)0.78748 (15)0.0195 (3)
H10−0.87131.17140.77080.023*
C11−0.5958 (3)1.16250 (16)0.88007 (15)0.0211 (4)
H11−0.67131.23640.92690.025*
C12−0.3575 (3)1.09182 (16)0.90608 (15)0.0209 (4)
H12−0.27821.12140.96880.025*
C13−0.2415 (3)0.98128 (16)0.84123 (15)0.0186 (3)
H13−0.08570.93520.85970.022*
C14−0.3633 (3)0.93855 (15)0.74565 (14)0.0142 (3)
S10.28595 (6)0.63836 (3)0.83817 (3)0.01403 (14)
O10.1783 (2)0.67614 (11)0.72006 (10)0.0209 (3)
O20.3077 (2)0.48835 (11)0.85361 (11)0.0193 (3)
H20.155 (4)0.469 (2)0.8530 (18)0.023*
O30.1275 (2)0.70674 (11)0.93855 (11)0.0214 (3)
O40.5331 (2)0.65395 (12)0.84063 (12)0.0247 (3)
O1S−0.0979 (2)0.42771 (13)0.84748 (11)0.0207 (3)
H1A−0.221 (4)0.498 (2)0.8448 (19)0.025*
H1B−0.120 (4)0.387 (2)0.912 (2)0.025*
U11U22U33U12U13U23
N10.0135 (6)0.0134 (6)0.0161 (6)−0.0012 (5)−0.0020 (5)0.0022 (5)
C20.0157 (7)0.0149 (7)0.0140 (7)−0.0043 (6)−0.0002 (6)0.0024 (6)
C30.0195 (8)0.0184 (8)0.0189 (8)−0.0002 (6)−0.0016 (6)−0.0003 (6)
C40.0276 (9)0.0197 (8)0.0190 (8)−0.0043 (7)−0.0006 (7)−0.0036 (6)
C50.0248 (9)0.0272 (9)0.0158 (8)−0.0108 (7)−0.0044 (6)−0.0006 (6)
C60.0170 (8)0.0238 (8)0.0179 (8)−0.0062 (6)−0.0041 (6)0.0040 (6)
C70.0144 (7)0.0163 (7)0.0154 (7)−0.0045 (6)−0.0005 (6)0.0033 (6)
N80.0152 (7)0.0173 (7)0.0183 (7)−0.0030 (5)−0.0017 (5)0.0022 (5)
C90.0152 (7)0.0147 (7)0.0169 (7)−0.0035 (6)−0.0008 (6)0.0028 (6)
C100.0182 (8)0.0150 (8)0.0229 (8)0.0007 (6)0.0006 (6)0.0011 (6)
C110.0264 (9)0.0137 (8)0.0215 (8)−0.0019 (6)0.0011 (7)−0.0012 (6)
C120.0276 (9)0.0181 (8)0.0183 (8)−0.0074 (7)−0.0039 (7)−0.0013 (6)
C130.0184 (8)0.0181 (8)0.0196 (8)−0.0040 (6)−0.0048 (6)0.0016 (6)
C140.0159 (7)0.0115 (7)0.0150 (7)−0.0034 (6)0.0007 (6)0.0020 (6)
S10.0126 (2)0.0130 (2)0.0160 (2)−0.00190 (14)−0.00241 (14)0.00158 (14)
O10.0199 (6)0.0211 (6)0.0178 (6)0.0032 (5)−0.0026 (5)0.0026 (4)
O20.0169 (6)0.0131 (6)0.0272 (6)−0.0019 (4)−0.0025 (5)0.0015 (4)
O30.0240 (6)0.0181 (6)0.0201 (6)−0.0012 (5)0.0001 (5)−0.0022 (4)
O40.0172 (6)0.0248 (6)0.0338 (7)−0.0080 (5)−0.0048 (5)0.0066 (5)
O1S0.0175 (6)0.0211 (6)0.0223 (6)−0.0022 (5)−0.0007 (5)0.0008 (5)
N1—C21.342 (2)C9—C141.431 (2)
N1—C141.347 (2)C10—C111.360 (2)
N1—H10.86 (2)C10—H100.9300
C2—C31.412 (2)C11—C121.417 (2)
C2—C71.433 (2)C11—H110.9300
C3—C41.363 (2)C12—C131.366 (2)
C3—H30.9300C12—H120.9300
C4—C51.428 (2)C13—C141.410 (2)
C4—H40.9300C13—H130.9300
C5—C61.359 (2)S1—O41.4465 (12)
C5—H50.9300S1—O31.4595 (12)
C6—C71.427 (2)S1—O11.4685 (12)
C6—H60.9300S1—O21.5452 (11)
C7—N81.340 (2)O2—H20.93 (2)
N8—C91.345 (2)O1S—H1A0.89 (2)
C9—C101.427 (2)O1S—H1B0.84 (2)
C2—N1—C14122.42 (14)C10—C9—C14118.10 (14)
C2—N1—H1117.8 (13)C11—C10—C9119.91 (15)
C14—N1—H1119.6 (13)C11—C10—H10120.0
N1—C2—C3121.43 (14)C9—C10—H10120.0
N1—C2—C7117.80 (14)C10—C11—C12120.87 (15)
C3—C2—C7120.77 (14)C10—C11—H11119.6
C4—C3—C2119.09 (15)C12—C11—H11119.6
C4—C3—H3120.5C13—C12—C11121.57 (15)
C2—C3—H3120.5C13—C12—H12119.2
C3—C4—C5121.01 (15)C11—C12—H12119.2
C3—C4—H4119.5C12—C13—C14118.48 (15)
C5—C4—H4119.5C12—C13—H13120.8
C6—C5—C4120.90 (15)C14—C13—H13120.8
C6—C5—H5119.5N1—C14—C13121.24 (14)
C4—C5—H5119.5N1—C14—C9117.71 (14)
C5—C6—C7120.12 (15)C13—C14—C9121.05 (14)
C5—C6—H6119.9O4—S1—O3113.27 (7)
C7—C6—H6119.9O4—S1—O1112.32 (7)
N8—C7—C6120.05 (14)O3—S1—O1110.75 (7)
N8—C7—C2121.85 (14)O4—S1—O2104.85 (7)
C6—C7—C2118.09 (14)O3—S1—O2107.93 (7)
C7—N8—C9118.37 (14)O1—S1—O2107.28 (7)
N8—C9—C10120.09 (14)S1—O2—H2111.1 (13)
N8—C9—C14121.81 (14)H1A—O1S—H1B107 (2)
C14—N1—C2—C3−177.42 (14)C7—N8—C9—C10−178.66 (14)
C14—N1—C2—C71.9 (2)C7—N8—C9—C141.3 (2)
N1—C2—C3—C4179.87 (15)N8—C9—C10—C11−179.55 (15)
C7—C2—C3—C40.6 (2)C14—C9—C10—C110.5 (2)
C2—C3—C4—C50.5 (3)C9—C10—C11—C120.7 (2)
C3—C4—C5—C6−0.7 (3)C10—C11—C12—C13−1.3 (3)
C4—C5—C6—C7−0.3 (3)C11—C12—C13—C140.6 (2)
C5—C6—C7—N8−177.83 (15)C2—N1—C14—C13179.42 (14)
C5—C6—C7—C21.4 (2)C2—N1—C14—C9−0.6 (2)
N1—C2—C7—N8−1.6 (2)C12—C13—C14—N1−179.43 (15)
C3—C2—C7—N8177.64 (15)C12—C13—C14—C90.6 (2)
N1—C2—C7—C6179.15 (13)N8—C9—C14—N1−1.1 (2)
C3—C2—C7—C6−1.6 (2)C10—C9—C14—N1178.86 (14)
C6—C7—N8—C9179.27 (14)N8—C9—C14—C13178.92 (14)
C2—C7—N8—C90.1 (2)C10—C9—C14—C13−1.1 (2)
D—H···AD—HH···AD···AD—H···A
N1—H1···O10.86 (2)1.81 (2)2.6685 (18)173.3 (19)
O2—H2···O1S0.93 (2)1.59 (2)2.5223 (16)177 (2)
O1S—H1A···O4i0.89 (2)1.87 (2)2.7577 (18)176 (2)
O1S—H1B···O3ii0.84 (2)1.90 (2)2.7405 (18)173 (2)
C6—H6···N8iii0.932.613.538 (2)172
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N1—H1⋯O10.86 (2)1.81 (2)2.6685 (18)173.3 (19)
O2—H2⋯O1S 0.93 (2)1.59 (2)2.5223 (16)177 (2)
O1S—H1A⋯O4i 0.89 (2)1.87 (2)2.7577 (18)176 (2)
O1S—H1B⋯O3ii 0.84 (2)1.90 (2)2.7405 (18)173 (2)
C6—H6⋯N8iii 0.932.613.538 (2)172

Symmetry codes: (i) ; (ii) ; (iii) .

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Phenazinium methyl sulfate.

Authors:  Nai-Qiang Zhang; Ping Li; Jian Dong; Hong-Yu Chen
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-06-13

3.  Phenazin-5-ium bromide.

Authors:  Gong-Xiao Zhang; Ping Li; Jian Dong; Hong-Yu Chen
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-06-23
  3 in total

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