Literature DB >> 23629589

Exploring higher-order EGFR oligomerisation and phosphorylation--a combined experimental and theoretical approach.

Noga Kozer1, Dipak Barua, Suzanne Orchard, Eduoard C Nice, Antony W Burgess, William S Hlavacek, Andrew H A Clayton.   

Abstract

The epidermal growth factor receptor (EGFR) kinase is generally considered to be activated by either ligand-induced dimerisation or a ligand-induced conformational change within pre-formed dimers. Ligand-induced higher-order EGFR oligomerisation or clustering has been reported but it is not clear how EGFR oligomers, as distinct from EGFR dimers, influence signaling outputs. To address this question, we combined measures of receptor clustering (microscopy; image correlation spectroscopy) and phosphorylation (Western blots) with modelling of mass-action chemical kinetics. A stable BaF/3 cell-line that contains a high proportion (>90%) of inactive dimers of EGFR-eGFP but no secreted ligand and no other detectable ErbB receptors was used as the model cell system. EGF at concentrations of greater than 1 nM was found to cluster EGFR-eGFP dimers into higher-order complexes and cause parallel increases in EGFR phosphorylation. The kinetics of EGFR clustering and phosphorylation were both rapid, plateauing within 2 minutes after stimulation with 30 nM EGF. A rule-based model was formulated to interpret the data. This model took into account ligand binding, ligand-induced conformational changes in the cytosolic tail, monomer-dimer-trimer-tetramer transitions via ectodomain- and kinase-mediated interactions, and phosphorylation. The model predicts that cyclic EGFR tetramers are the predominant phosphorylated species, in which activated receptor dimers adopt a cyclic side-by-side orientation, and that receptor kinase activation is stabilised by the intramolecular interactions responsible for cyclic tetramerization.

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Year:  2013        PMID: 23629589      PMCID: PMC3698845          DOI: 10.1039/c3mb70073a

Source DB:  PubMed          Journal:  Mol Biosyst        ISSN: 1742-2051


  65 in total

1.  Analysis of membrane protein cluster densities and sizes in situ by image correlation spectroscopy.

Authors:  N O Petersen; C Brown; A Kaminski; J Rocheleau; M Srivastava; P W Wiseman
Journal:  Faraday Discuss       Date:  1998       Impact factor: 4.008

Review 2.  Cell signaling by receptor tyrosine kinases.

Authors:  J Schlessinger
Journal:  Cell       Date:  2000-10-13       Impact factor: 41.582

3.  Activation of preformed EGF receptor dimers by ligand-induced rotation of the transmembrane domain.

Authors:  T Moriki; H Maruyama; I N Maruyama
Journal:  J Mol Biol       Date:  2001-08-31       Impact factor: 5.469

Review 4.  Oncogenic kinase signalling.

Authors:  P Blume-Jensen; T Hunter
Journal:  Nature       Date:  2001-05-17       Impact factor: 49.962

5.  Quantitative imaging of lateral ErbB1 receptor signal propagation in the plasma membrane.

Authors:  P J Verveer; F S Wouters; A R Reynolds; P I Bastiaens
Journal:  Science       Date:  2000-11-24       Impact factor: 47.728

6.  Targeted antireceptor therapy with monoclonal antibodies leads to the formation of inactivated tetrameric forms of ErbB receptors.

Authors:  Keiji Furuuchi; Alan Berezov; Toru Kumagai; Mark I Greene
Journal:  J Immunol       Date:  2007-01-15       Impact factor: 5.422

7.  Identification of a determinant of epidermal growth factor receptor ligand-binding specificity using a truncated, high-affinity form of the ectodomain.

Authors:  T C Elleman; T Domagala; N M McKern; M Nerrie; B Lönnqvist; T E Adams; J Lewis; G O Lovrecz; P A Hoyne; K M Richards; G J Howlett; J Rothacker; R N Jorissen; M Lou; T P Garrett; A W Burgess; E C Nice; C W Ward
Journal:  Biochemistry       Date:  2001-07-31       Impact factor: 3.162

8.  Crystal structure of a truncated epidermal growth factor receptor extracellular domain bound to transforming growth factor alpha.

Authors:  Thomas P J Garrett; Neil M McKern; Meizhen Lou; Thomas C Elleman; Timothy E Adams; George O Lovrecz; Hong-Jian Zhu; Francesca Walker; Morry J Frenkel; Peter A Hoyne; Robert N Jorissen; Edouard C Nice; Antony W Burgess; Colin W Ward
Journal:  Cell       Date:  2002-09-20       Impact factor: 41.582

9.  Preformed oligomeric epidermal growth factor receptors undergo an ectodomain structure change during signaling.

Authors:  Marisa Martin-Fernandez; David T Clarke; Mark J Tobin; Samantha V Jones; Gareth R Jones
Journal:  Biophys J       Date:  2002-05       Impact factor: 4.033

10.  A comparison of catecholamine-induced internalization of beta-adrenergic receptors and receptor-mediated endocytosis of epidermal growth factor in human astrocytoma cells. Inhibition by phenylarsine oxide.

Authors:  C Hertel; S J Coulter; J P Perkins
Journal:  J Biol Chem       Date:  1985-10-15       Impact factor: 5.157

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  28 in total

1.  BioNetFit: a fitting tool compatible with BioNetGen, NFsim and distributed computing environments.

Authors:  Brandon R Thomas; Lily A Chylek; Joshua Colvin; Suman Sirimulla; Andrew H A Clayton; William S Hlavacek; Richard G Posner
Journal:  Bioinformatics       Date:  2015-11-09       Impact factor: 6.937

2.  Competitive binding of STATs to receptor phospho-Tyr motifs accounts for altered cytokine responses.

Authors:  Stephan Wilmes; Polly-Anne Jeffrey; Jonathan Martinez-Fabregas; Maximillian Hafer; Paul K Fyfe; Elizabeth Pohler; Silvia Gaggero; Martín López-García; Grant Lythe; Charles Taylor; Thomas Guerrier; David Launay; Suman Mitra; Jacob Piehler; Carmen Molina-París; Ignacio Moraga
Journal:  Elife       Date:  2021-04-19       Impact factor: 8.140

Review 3.  Rule-based modeling: a computational approach for studying biomolecular site dynamics in cell signaling systems.

Authors:  Lily A Chylek; Leonard A Harris; Chang-Shung Tung; James R Faeder; Carlos F Lopez; William S Hlavacek
Journal:  Wiley Interdiscip Rev Syst Biol Med       Date:  2013-09-30

4.  Ligand-induced homotypic and heterotypic clustering of apolipoprotein E receptor 2.

Authors:  Shailaja D Divekar; Teal C Burrell; Jennifer E Lee; Edwin J Weeber; G William Rebeck
Journal:  J Biol Chem       Date:  2014-04-22       Impact factor: 5.157

Review 5.  Fluorescence-based approaches for monitoring membrane receptor oligomerization.

Authors:  Andrew Ha Clayton
Journal:  J Biosci       Date:  2018-07       Impact factor: 1.826

6.  Linear Chains of HER2 Receptors Found in the Plasma Membrane Using Liquid-Phase Electron Microscopy.

Authors:  Kelly Parker; Patrick Trampert; Verena Tinnemann; Diana Peckys; Tim Dahmen; Niels de Jonge
Journal:  Biophys J       Date:  2018-06-18       Impact factor: 4.033

7.  Maximal aggregation of polynomial dynamical systems.

Authors:  Luca Cardelli; Mirco Tribastone; Max Tschaikowski; Andrea Vandin
Journal:  Proc Natl Acad Sci U S A       Date:  2017-09-06       Impact factor: 11.205

8.  Bayesian inference using qualitative observations of underlying continuous variables.

Authors:  Eshan D Mitra; William S Hlavacek
Journal:  Bioinformatics       Date:  2020-05-01       Impact factor: 6.937

Review 9.  Membrane receptor activation mechanisms and transmembrane peptide tools to elucidate them.

Authors:  Justin M Westerfield; Francisco N Barrera
Journal:  J Biol Chem       Date:  2019-12-25       Impact factor: 5.157

10.  Dissecting Particle Uptake Heterogeneity in a Cell Population Using Bayesian Analysis.

Authors:  Md Shahinuzzaman; Dipak Barua
Journal:  Biophys J       Date:  2020-02-12       Impact factor: 4.033

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