Literature DB >> 23625472

Ratiometric analysis in hyperpolarized NMR (I): test of the two-site exchange model and the quantification of reaction rate constants.

Lin Z Li1, Stephen Kadlececk, He N Xu, Dania Daye, Benjamin Pullinger, Harrilla Profka, Lewis Chodosh, Rahim Rizi.   

Abstract

Conventional methods for the analysis of in vivo hyperpolarized (13) C NMR data from the lactate dehydrogenase (LDH) reaction usually make assumptions on the stability of rate constants and/or the validity of the two-site exchange model. In this study, we developed a framework to test the validity of the assumption of stable reaction rate constants and the two-site exchange model in vivo via ratiometric fitting of the time courses of the signal ratio L(t)/P(t). Our analysis provided evidence that the LDH enzymatic kinetics observed by hyperpolarized NMR are in near-equilibrium and satisfy the two-site exchange model for only a specific time window. In addition, we quantified both the forward and reverse exchange rate constants of the LDH reaction for the transgenic and mouse xenograft models of breast cancer using the ratio fitting method developed, which includes only two modeling parameters and is less sensitive to the influence of instrument settings/protocols, such as flip angles, degree of polarization and tracer dosage. We further compared the ratio fitting method with a conventional two-site exchange modeling method, i.e. the differential equation fitting method, using both the experimental and simulated hyperpolarized NMR data. The ratio fitting method appeared to fit better than the differential equation fitting method for the reverse rate constant on the mouse tumor data, with less relative errors on average, whereas the differential equation fitting method also resulted in a negative reverse rate constant for one tumor. The simulation results indicated that the accuracy of both methods depends on the width of the transport function, noise level and rate constant ratio; one method may be more accurate than the other based on the experimental/biological conditions aforementioned. We were able to categorize our tumor models into specific conditions of the computer simulation and to estimate the errors of rate quantification. We also discussed possible approaches to the development of more accurate rate quantification methods for hyperpolarized NMR.
Copyright © 2013 John Wiley & Sons, Ltd.

Entities:  

Keywords:  lactate; lactate dehydrogenase; net flux model; pyruvate; rate constant; ratio fitting; ratiometric analysis; two-site exchange

Mesh:

Substances:

Year:  2013        PMID: 23625472      PMCID: PMC3930471          DOI: 10.1002/nbm.2953

Source DB:  PubMed          Journal:  NMR Biomed        ISSN: 0952-3480            Impact factor:   4.044


  16 in total

1.  Real-time metabolic imaging.

Authors:  Klaes Golman; René in 't Zandt; Mikkel Thaning
Journal:  Proc Natl Acad Sci U S A       Date:  2006-07-12       Impact factor: 11.205

2.  Analysis of cancer metabolism by imaging hyperpolarized nuclei: prospects for translation to clinical research.

Authors:  John Kurhanewicz; Daniel B Vigneron; Kevin Brindle; Eduard Y Chekmenev; Arnaud Comment; Charles H Cunningham; Ralph J Deberardinis; Gary G Green; Martin O Leach; Sunder S Rajan; Rahim R Rizi; Brian D Ross; Warren S Warren; Craig R Malloy
Journal:  Neoplasia       Date:  2011-02       Impact factor: 5.715

3.  Kinetic modeling of hyperpolarized 13C1-pyruvate metabolism in normal rats and TRAMP mice.

Authors:  Matthew L Zierhut; Yi-Fen Yen; Albert P Chen; Robert Bok; Mark J Albers; Vickie Zhang; Jim Tropp; Ilwoo Park; Daniel B Vigneron; John Kurhanewicz; Ralph E Hurd; Sarah J Nelson
Journal:  J Magn Reson       Date:  2009-10-13       Impact factor: 2.229

4.  Quantitative mitochondrial redox imaging of breast cancer metastatic potential.

Authors:  He N Xu; Shoko Nioka; Jerry D Glickson; Britton Chance; Lin Z Li
Journal:  J Biomed Opt       Date:  2010 May-Jun       Impact factor: 3.170

5.  Hyperpolarized 13C dehydroascorbate as an endogenous redox sensor for in vivo metabolic imaging.

Authors:  Kayvan R Keshari; John Kurhanewicz; Robert Bok; Peder E Z Larson; Daniel B Vigneron; David M Wilson
Journal:  Proc Natl Acad Sci U S A       Date:  2011-10-31       Impact factor: 11.205

6.  Metabolic imaging by hyperpolarized 13C magnetic resonance imaging for in vivo tumor diagnosis.

Authors:  Klaes Golman; René In't Zandt; Mathilde Lerche; Rikard Pehrson; Jan Henrik Ardenkjaer-Larsen
Journal:  Cancer Res       Date:  2006-11-15       Impact factor: 12.701

7.  A novel doxycycline-inducible system for the transgenic analysis of mammary gland biology.

Authors:  Edward J Gunther; George K Belka; Gerald B W Wertheim; James Wang; Jennifer L Hartman; Robert B Boxer; Lewis A Chodosh
Journal:  FASEB J       Date:  2002-03       Impact factor: 5.191

8.  MITOCHONDRIAL REDOX IMAGING FOR CANCER DIAGNOSTIC AND THERAPEUTIC STUDIES.

Authors:  Lin Z Li; He N Xu; Mahsa Ranji; Shoko Nioka; Britton Chance
Journal:  J Innov Opt Health Sci       Date:  2009-10

9.  Detecting tumor response to treatment using hyperpolarized 13C magnetic resonance imaging and spectroscopy.

Authors:  Sam E Day; Mikko I Kettunen; Ferdia A Gallagher; De-En Hu; Mathilde Lerche; Jan Wolber; Klaes Golman; Jan Henrik Ardenkjaer-Larsen; Kevin M Brindle
Journal:  Nat Med       Date:  2007-10-28       Impact factor: 53.440

10.  Metabolite kinetics in C6 rat glioma model using magnetic resonance spectroscopic imaging of hyperpolarized [1-(13)C]pyruvate.

Authors:  Jae Mo Park; Sonal Josan; Taichang Jang; Milton Merchant; Yi-Fen Yen; Ralph E Hurd; Lawrence Recht; Daniel M Spielman; Dirk Mayer
Journal:  Magn Reson Med       Date:  2012-02-14       Impact factor: 4.668

View more
  10 in total

1.  A novel perfused Bloch-McConnell simulator for analyzing the accuracy of dynamic hyperpolarized MRS.

Authors:  Christopher M Walker; Yunyun Chen; Stephen Y Lai; James A Bankson
Journal:  Med Phys       Date:  2016-02       Impact factor: 4.071

2.  The effect of exogenous substrate concentrations on true and apparent metabolism of hyperpolarized pyruvate in the isolated perfused lung.

Authors:  Stephen Kadlecek; Hoora Shaghaghi; Sarmad Siddiqui; Harrilla Profka; Mehrdad Pourfathi; Rahim Rizi
Journal:  NMR Biomed       Date:  2014-10-20       Impact factor: 4.044

Review 3.  The use of hyperpolarized carbon-13 magnetic resonance for molecular imaging.

Authors:  Sarmad Siddiqui; Stephen Kadlecek; Mehrdad Pourfathi; Yi Xin; William Mannherz; Hooman Hamedani; Nicholas Drachman; Kai Ruppert; Justin Clapp; Rahim Rizi
Journal:  Adv Drug Deliv Rev       Date:  2016-09-04       Impact factor: 15.470

4.  A pre-tracer approach for improving the accuracy of metabolic measurements by hyperpolarized nuclear magnetic resonance.

Authors:  Lin Z Li
Journal:  Quant Imaging Med Surg       Date:  2016-10

5.  Differentiating inflamed and normal lungs by the apparent reaction rate constants of lactate dehydrogenase probed by hyperpolarized (13)C labeled pyruvate.

Authors:  He N Xu; Stephen Kadlececk; Hoora Shaghaghi; Huaqing Zhao; Harilla Profka; Mehrdad Pourfathi; Rahim Rizi; Lin Z Li
Journal:  Quant Imaging Med Surg       Date:  2016-02

6.  Influence of parameter accuracy on pharmacokinetic analysis of hyperpolarized pyruvate.

Authors:  Chang-Yu Sun; Christopher M Walker; Keith A Michel; Aradhana M Venkatesan; Stephen Y Lai; James A Bankson
Journal:  Magn Reson Med       Date:  2017-11-01       Impact factor: 4.668

7.  In vivo metabolic evaluation of breast tumor mouse xenografts for predicting aggressiveness using the hyperpolarized (13)C-NMR technique.

Authors:  He N Xu; Stephen Kadlececk; Ben Pullinger; Harrila Profka; Kejia Cai; Hari Hariharan; Rahim Rizi; Lin Z Li
Journal:  Adv Exp Med Biol       Date:  2013       Impact factor: 2.622

8.  Is higher lactate an indicator of tumor metastatic risk? A pilot MRS study using hyperpolarized (13)C-pyruvate.

Authors:  He N Xu; Stephen Kadlececk; Harrilla Profka; Jerry D Glickson; Rahim Rizi; Lin Z Li
Journal:  Acad Radiol       Date:  2014-02       Impact factor: 3.173

9.  Multisite Kinetic Modeling of (13)C Metabolic MR Using [1-(13)C]Pyruvate.

Authors:  Pedro A Gómez Damián; Jonathan I Sperl; Martin A Janich; Oleksandr Khegai; Florian Wiesinger; Steffen J Glaser; Axel Haase; Markus Schwaiger; Rolf F Schulte; Marion I Menzel
Journal:  Radiol Res Pract       Date:  2014-12-08

10.  A comparison of quantitative methods for clinical imaging with hyperpolarized (13)C-pyruvate.

Authors:  Charlie J Daniels; Mary A McLean; Rolf F Schulte; Fraser J Robb; Andrew B Gill; Nicholas McGlashan; Martin J Graves; Markus Schwaiger; David J Lomas; Kevin M Brindle; Ferdia A Gallagher
Journal:  NMR Biomed       Date:  2016-01-18       Impact factor: 4.044

  10 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.