Literature DB >> 23624525

Genome-wide association analyses in Han Chinese identify two new susceptibility loci for amyotrophic lateral sclerosis.

Min Deng1, Ling Wei, Xianbo Zuo, Yanghua Tian, Fei Xie, Panpan Hu, Chunyan Zhu, Fengqiong Yu, Yu Meng, Honghao Wang, Fangfang Zhang, Huijuan Ma, Rong Ye, Huaidong Cheng, Jing Du, Wenwen Dong, Shanshan Zhou, Changqing Wang, Yu Wang, Jingye Wang, Xianwen Chen, Zhongwu Sun, Nong Zhou, Yubao Jiang, Xiuxiu Liu, Xiaogang Li, Nan Zhang, Na Liu, Yingjun Guan, Yongsheng Han, Yongzhu Han, Xinyi Lv, Yu Fu, Hui Yu, Chunhua Xi, Dandan Xie, Qiyuan Zhao, Peng Xie, Xin Wang, Zhijun Zhang, Lu Shen, Yong Cui, Xianyong Yin, Hui Cheng, Bo Liang, Xiaodong Zheng, Tatia M C Lee, Gang Chen, Fusheng Zhou, Jan H Veldink, Wim Robberecht, John E Landers, Peter M Andersen, Ammar Al-Chalabi, Chris Shaw, Chunfeng Liu, Beisha Tang, Shangxi Xiao, Janice Robertson, Fengyu Zhang, Leonard H van den Berg, Liangdan Sun, Jianjun Liu, Sen Yang, Xiaodong Ju, Kai Wang, Xuejun Zhang.   

Abstract

To identify susceptibility genes for amyotrophic lateral sclerosis (ALS), we conducted a genome-wide association study (GWAS) in 506 individuals with sporadic ALS and 1,859 controls of Han Chinese ancestry. Ninety top SNPs suggested by the current GWAS and 6 SNPs identified by previous GWAS were analyzed in an independent cohort of 706 individuals with ALS and 1,777 controls of Han Chinese ancestry. We discovered two new susceptibility loci for ALS at 1q32 (CAMK1G, rs6703183, Pcombined = 2.92 × 10(-8), odds ratio (OR) = 1.31) and 22p11 (CABIN1 and SUSD2, rs8141797, Pcombined = 2.35 × 10(-9), OR = 1.52). These two loci explain 12.48% of the overall variance in disease risk in the Han Chinese population. We found no association evidence for the previously reported loci in the Han Chinese population, suggesting genetic heterogeneity of disease susceptibility for ALS between ancestry groups. Our study identifies two new susceptibility loci and suggests new pathogenic mechanisms of ALS.

Entities:  

Mesh:

Substances:

Year:  2013        PMID: 23624525     DOI: 10.1038/ng.2627

Source DB:  PubMed          Journal:  Nat Genet        ISSN: 1061-4036            Impact factor:   38.330


  27 in total

1.  Are the El Escorial and Revised El Escorial criteria for ALS reproducible? A study of inter-observer agreement.

Authors:  R B Forbes; S Colville; R J Swingler
Journal:  Amyotroph Lateral Scler Other Motor Neuron Disord       Date:  2001-09

2.  Genetics. The elusive ALS genes.

Authors:  Ken Garber
Journal:  Science       Date:  2008-01-04       Impact factor: 47.728

3.  Histone deacetylase inhibitors prevent p53-dependent and p53-independent Bax-mediated neuronal apoptosis through two distinct mechanisms.

Authors:  Takuma Uo; Timothy D Veenstra; Richard S Morrison
Journal:  J Neurosci       Date:  2009-03-04       Impact factor: 6.167

Review 4.  Apoptotic and non-apoptotic roles of caspases in neuronal physiology and pathophysiology.

Authors:  Bradley T Hyman; Junying Yuan
Journal:  Nat Rev Neurosci       Date:  2012-05-18       Impact factor: 34.870

5.  Common SNPs explain a large proportion of the heritability for human height.

Authors:  Jian Yang; Beben Benyamin; Brian P McEvoy; Scott Gordon; Anjali K Henders; Dale R Nyholt; Pamela A Madden; Andrew C Heath; Nicholas G Martin; Grant W Montgomery; Michael E Goddard; Peter M Visscher
Journal:  Nat Genet       Date:  2010-06-20       Impact factor: 38.330

6.  ITPR2 as a susceptibility gene in sporadic amyotrophic lateral sclerosis: a genome-wide association study.

Authors:  Michael A van Es; Paul W Van Vught; Hylke M Blauw; Lude Franke; Christiaan G Saris; Peter M Andersen; Ludo Van Den Bosch; Sonja W de Jong; Ruben van 't Slot; Anna Birve; Robin Lemmens; Vianney de Jong; Frank Baas; Helenius J Schelhaas; Kristel Sleegers; Christine Van Broeckhoven; John H J Wokke; Cisca Wijmenga; Wim Robberecht; Jan H Veldink; Roel A Ophoff; Leonard H van den Berg
Journal:  Lancet Neurol       Date:  2007-10       Impact factor: 44.182

7.  Regulation of dendritogenesis via a lipid-raft-associated Ca2+/calmodulin-dependent protein kinase CLICK-III/CaMKIgamma.

Authors:  Sayaka Takemoto-Kimura; Natsumi Ageta-Ishihara; Mio Nonaka; Aki Adachi-Morishima; Tatsuo Mano; Michiko Okamura; Hajime Fujii; Toshimitsu Fuse; Mikio Hoshino; Shingo Suzuki; Masami Kojima; Masayoshi Mishina; Hiroyuki Okuno; Haruhiko Bito
Journal:  Neuron       Date:  2007-06-07       Impact factor: 17.173

8.  Molecular cloning and characterization of CLICK-III/CaMKIgamma, a novel membrane-anchored neuronal Ca2+/calmodulin-dependent protein kinase (CaMK).

Authors:  Sayaka Takemoto-Kimura; Hisashi Terai; Maki Takamoto; Shogo Ohmae; Shoko Kikumura; Eri Segi; Yoshiki Arakawa; Tomoyuki Furuyashiki; Shuh Narumiya; Haruhiko Bito
Journal:  J Biol Chem       Date:  2003-03-11       Impact factor: 5.157

9.  von Willebrand factor type D domain mutant of SVS-1/SUSD2, vWD(m), induces apoptosis in HeLa cells.

Authors:  Tetsuo Sugahara; Yzumi Yamashita; Masahito Shinomi; Yumiko Isobe; Banri Yamanoha; Hiroyoshi Iseki; Akihiko Takeda; Yasushi Okazaki; Kenji Kawai; Hiroshi Suemizu; Toshiwo Andoh
Journal:  Cancer Sci       Date:  2007-04-12       Impact factor: 6.716

10.  Isolation of a novel mouse gene, mSVS-1/SUSD2, reversing tumorigenic phenotypes of cancer cells in vitro.

Authors:  Tetsuo Sugahara; Yzumi Yamashita; Masahito Shinomi; Banri Yamanoha; Hiroyoshi Iseki; Akihiko Takeda; Yasushi Okazaki; Yoshihide Hayashizaki; Kenji Kawai; Hiroshi Suemizu; Toshiwo Andoh
Journal:  Cancer Sci       Date:  2007-04-12       Impact factor: 6.716

View more
  34 in total

1.  Polymorphism of rs3737597 in DISC1 Gene on Chromosome 1q42.2 in sALS Patients: a Chinese Han Population Case-Control Study.

Authors:  Libin Deng; Liwei Huo; Jie Zhang; Xiaoli Tang; Zhujun Cheng; Gang Li; Xin Fang; Jinsong Xu; Xiong Zhang; Renshi Xu
Journal:  Mol Neurobiol       Date:  2016-04-07       Impact factor: 5.590

Review 2.  Advances in the discovery of genetic risk factors for complex forms of neurodegenerative disorders: contemporary approaches, success, challenges and prospects.

Authors:  Sumeet Kumar; Navneesh Yadav; Sanjay Pandey; B K Thelma
Journal:  J Genet       Date:  2018-07       Impact factor: 1.166

3.  Motor neuron disease: Two new ALS susceptibility loci identified in Han Chinese.

Authors:  Heather Wood
Journal:  Nat Rev Neurol       Date:  2013-05-21       Impact factor: 42.937

Review 4.  Genetics of Amyotrophic Lateral Sclerosis.

Authors:  Mehdi Ghasemi; Robert H Brown
Journal:  Cold Spring Harb Perspect Med       Date:  2018-05-01       Impact factor: 6.915

5.  Genome-wide analysis of the heritability of amyotrophic lateral sclerosis.

Authors:  Margaux F Keller; Luigi Ferrucci; Andrew B Singleton; Pentti J Tienari; Hannu Laaksovirta; Gabriella Restagno; Adriano Chiò; Bryan J Traynor; Michael A Nalls
Journal:  JAMA Neurol       Date:  2014-09       Impact factor: 18.302

Review 6.  Genetic causes of amyotrophic lateral sclerosis: new genetic analysis methodologies entailing new opportunities and challenges.

Authors:  Giuseppe Marangi; Bryan J Traynor
Journal:  Brain Res       Date:  2014-10-12       Impact factor: 3.252

7.  UNC13A variant rs12608932 is associated with increased risk of amyotrophic lateral sclerosis and reduced patient survival: a meta-analysis.

Authors:  Baiyuan Yang; Haixia Jiang; Fang Wang; Shimei Li; Chongmin Wu; Jianjian Bao; Yongyun Zhu; Zhong Xu; Bin Liu; Hui Ren; Xinglong Yang
Journal:  Neurol Sci       Date:  2019-06-14       Impact factor: 3.307

8.  Association of ATXN2 intermediate-length CAG repeats with amyotrophic lateral sclerosis correlates with the distributions of normal CAG repeat alleles among individual ethnic populations.

Authors:  Hiroya Naruse; Takashi Matsukawa; Hiroyuki Ishiura; Jun Mitsui; Yuji Takahashi; Hiroki Takano; Jun Goto; Tatsushi Toda; Shoji Tsuji
Journal:  Neurogenetics       Date:  2019-03-07       Impact factor: 2.660

9.  The fused in sarcoma protein forms cytoplasmic aggregates in motor neurons derived from integration-free induced pluripotent stem cells generated from a patient with familial amyotrophic lateral sclerosis carrying the FUS-P525L mutation.

Authors:  Xinxiu Liu; Jiayu Chen; Wenchao Liu; Xiaogang Li; Qi Chen; Tao Liu; Shaorong Gao; Min Deng
Journal:  Neurogenetics       Date:  2015-04-26       Impact factor: 2.660

Review 10.  State of play in amyotrophic lateral sclerosis genetics.

Authors:  Alan E Renton; Adriano Chiò; Bryan J Traynor
Journal:  Nat Neurosci       Date:  2013-12-26       Impact factor: 24.884

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.