Literature DB >> 23615852

Breaking the conservation of guanine residues in the catalytic loop of 10-23 DNAzyme by position-specific nucleobase modifications for rate enhancement.

Yang Liu1, Zhiwen Li, Gaofeng Liu, Qi Wang, Wei Chen, Di Zhang, Maosheng Cheng, Zhibing Zheng, Keliang Liu, Junlin He.   

Abstract

10-23 DNAzyme has been used as a very good model for exploring the potential of functional nucleic acids. Its 15-mer catalytic core has been demonstrated to be the optimized in vitro selection result. However, with the introduction of protein-like functional groups through 2'-deoxyguanosine analogues, its two highly conserved guanine residues (G2 and G14) can be modified for more efficient 10-23 DNAzyme analogues. This result implies that chemical modifications of functional nucleic acids with well-designed nucleoside analogues of each canonical residue could be used as the first step in the efforts toward more powerful functions of nucleic acids.

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Year:  2013        PMID: 23615852     DOI: 10.1039/c3cc42067a

Source DB:  PubMed          Journal:  Chem Commun (Camb)        ISSN: 1359-7345            Impact factor:   6.222


  6 in total

1.  Investigations Into Chemically Stabilized Four-Letter DNA for DNA-Encoded Chemistry.

Authors:  Marco Potowski; Verena B K Kunig; Lukas Eberlein; Mateja Klika Škopić; Alexandros Vakalopoulos; Stefan M Kast; Andreas Brunschweiger
Journal:  Front Chem       Date:  2022-06-09       Impact factor: 5.545

2.  Single-molecule study of the effects of temperature, pH, and RNA base on the stepwise enzyme kinetics of 10-23 deoxyribozyme.

Authors:  Jiwon Jung; Seon Yong Kim; Seong Keun Kim
Journal:  RSC Adv       Date:  2022-05-18       Impact factor: 4.036

3.  A densely modified M2+-independent DNAzyme that cleaves RNA efficiently with multiple catalytic turnover.

Authors:  Yajun Wang; Erkai Liu; Curtis H Lam; David M Perrin
Journal:  Chem Sci       Date:  2018-01-16       Impact factor: 9.825

4.  Studies on the Two Thymine Residues in the Catalytic Core of 10-23 DNAzyme: The Impact on the Catalysis of Their 5-Substituted Functional Groups.

Authors:  Pengyu Li; Shanshan Du; Yang Li; Junlin He
Journal:  Molecules       Date:  2017-06-22       Impact factor: 4.411

5.  Investigation of 8-Aza-7-Deaza Purine Nucleoside Derivatives.

Authors:  Hang Ren; Haoyun An; Jingchao Tao
Journal:  Molecules       Date:  2019-03-11       Impact factor: 4.411

6.  Site-specific functionalization with amino, guanidinium, and imidazolyl groups enabling the activation of 10-23 DNAzyme.

Authors:  Shanshan Du; Yang Li; Zhilong Chai; Weiguo Shi; Junlin He
Journal:  RSC Adv       Date:  2020-05-19       Impact factor: 4.036

  6 in total

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