Literature DB >> 23612905

Robust evidence for five new Graves' disease risk loci from a staged genome-wide association analysis.

Shuang-Xia Zhao1, Li-Qiong Xue, Wei Liu, Zhao-Hui Gu, Chun-Ming Pan, Shao-Ying Yang, Ming Zhan, Hai-Ning Wang, Jun Liang, Guan-Qi Gao, Xiao-Mei Zhang, Guo-Yue Yuan, Chang-Gui Li, Wen-Hua Du, Bing-Li Liu, Li-Bin Liu, Gang Chen, Qing Su, Yong-De Peng, Jia-Jun Zhao, Guang Ning, Wei Huang, Liming Liang, Lu Qi, Sai-Juan Chen, Zhu Chen, Jia-Lun Chen, Huai-Dong Song.   

Abstract

Graves' disease (GD), characterized by autoantibodies targeting antigens specifically expressed in thyroid tissues causing hyperthyroidism, is triggered by a combination of genetic and environmental factors. However, only a few loci for GD risk were confirmed in the various ethnic groups, and additional genetic determinants have to be detected. In this study, we carried out a three-stage study in 9529 patients with GD and 9984 controls to identify new risk loci for GD and found genome-wide significant associations in the overall populations for five novel susceptibility loci: the GPR174-ITM2A at Xq21.1, C1QTNF6-RAC2 at 22q12.3-13.1, SLAMF6 at 1q23.2, ABO at 9q34.2 and an intergenic region harboring two non-coding RNAs at 14q32.2 and one previous indefinite locus, TG at 8q24.22 (Pcombined < 5 × 10(-8)). The genotypes of corresponding variants at 14q32.2 and 8q24.22 were correlated with the expression levels of C14orf64 and a TG transcript skipping exon 46, respectively. This study increased the number of GD loci with compelling evidence and indicated that non-coding RNAs might be potentially involved in the pathogenesis of GD.

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Year:  2013        PMID: 23612905     DOI: 10.1093/hmg/ddt183

Source DB:  PubMed          Journal:  Hum Mol Genet        ISSN: 0964-6906            Impact factor:   6.150


  37 in total

1.  Identification of BACH2 as a susceptibility gene for Graves' disease in the Chinese Han population based on a three-stage genome-wide association study.

Authors:  Wei Liu; Hai-Ning Wang; Zhao-Hui Gu; Shao-Ying Yang; Xiao-Ping Ye; Chun-Ming Pan; Shuang-Xia Zhao; Li-Qiong Xue; Hui-Jun Xie; Sha-Sha Yu; Cui-Cui Guo; Wen-Hua Du; Jun Liang; Xiao-Mei Zhang; Guo-Yue Yuan; Chang-Gui Li; Qing Su; Guan-Qi Gao; Huai-Dong Song
Journal:  Hum Genet       Date:  2013-12-12       Impact factor: 4.132

2.  RNASET2, GPR174, and PTPN22 gene polymorphisms are related to the risk of liver damage associated with the hyperthyroidism in patients with Graves' disease.

Authors:  Qing Zhang; Shaozheng Liu; Yanxing Guan; Qingjie Chen; Qing Zhang; Xiang Min
Journal:  J Clin Lab Anal       Date:  2017-05-31       Impact factor: 2.352

3.  A genome-wide association study on thyroid function and anti-thyroid peroxidase antibodies in Koreans.

Authors:  Soo Heon Kwak; Young Joo Park; Min Jin Go; Kyu Eun Lee; Su-Jin Kim; Hoon Sung Choi; Tae Hyuk Kim; Sung Hee Choi; Soo Lim; Ki Woong Kim; Do Joon Park; Sung Soo Kim; Jong-Young Lee; Kyong Soo Park; Hak C Jang; Nam H Cho
Journal:  Hum Mol Genet       Date:  2014-04-09       Impact factor: 6.150

Review 4.  Lysophospholipid receptor nomenclature review: IUPHAR Review 8.

Authors:  Yasuyuki Kihara; Michael Maceyka; Sarah Spiegel; Jerold Chun
Journal:  Br J Pharmacol       Date:  2014-07-12       Impact factor: 8.739

5.  Pancreatic cancer risk is modulated by inflammatory potential of diet and ABO genotype: a consortia-based evaluation and replication study.

Authors:  Samuel O Antwi; William R Bamlet; Katrina S Pedersen; Kari G Chaffee; Harvey A Risch; Nitin Shivappa; Susan E Steck; Kristin E Anderson; Paige M Bracci; Jerry Polesel; Diego Serraino; Carlo La Vecchia; Cristina Bosetti; Donghui Li; Ann L Oberg; Alan A Arslan; Demetrius Albanes; Eric J Duell; Inge Huybrechts; Laufey T Amundadottir; Robert Hoover; Satu Mannisto; Stephen J Chanock; Wei Zheng; Xiao-Ou Shu; Magdalena Stepien; Federico Canzian; Bas Bueno-de-Mesquita; José Ramon Quirós; Anne Zeleniuch-Jacquotte; Fiona Bruinsma; Roger L Milne; Graham G Giles; James R Hébert; Rachael Z Stolzenberg-Solomon; Gloria M Petersen
Journal:  Carcinogenesis       Date:  2018-07-30       Impact factor: 4.944

6.  Replication of association of nine susceptibility loci with Graves' disease in the Chinese Han population.

Authors:  Wenhua Du; Cuige Liang; Fengyuan Che; Xiaomeng Liu; Chunming Pan; Shuangxia Zhao; Qingyu Dong; Wenxia Li; Yueli Wang; Zhenyu Pan; Qian Gong; Lanxia Li; Huaidong Song; Guanqi Gao
Journal:  Int J Clin Exp Med       Date:  2014-11-15

7.  Construction of a population-specific HLA imputation reference panel and its application to Graves' disease risk in Japanese.

Authors:  Yukinori Okada; Yukihide Momozawa; Kyota Ashikawa; Masahiro Kanai; Koichi Matsuda; Yoichiro Kamatani; Atsushi Takahashi; Michiaki Kubo
Journal:  Nat Genet       Date:  2015-06-01       Impact factor: 38.330

8.  FLT3 stop mutation increases FLT3 ligand level and risk of autoimmune thyroid disease.

Authors:  Saedis Saevarsdottir; Thorunn A Olafsdottir; Erna V Ivarsdottir; Gisli H Halldorsson; Kristbjorg Gunnarsdottir; Asgeir Sigurdsson; Ari Johannesson; Jon K Sigurdsson; Thorhildur Juliusdottir; Sigrun H Lund; Asgeir O Arnthorsson; Edda L Styrmisdottir; Julius Gudmundsson; Gerdur M Grondal; Kristjan Steinsson; Lars Alfredsson; Johan Askling; Rafn Benediktsson; Ragnar Bjarnason; Arni J Geirsson; Bjorn Gudbjornsson; Hallgrimur Gudjonsson; Haukur Hjaltason; Astradur B Hreidarsson; Lars Klareskog; Ingrid Kockum; Helga Kristjansdottir; Thorvardur J Love; Bjorn R Ludviksson; Tomas Olsson; Pall T Onundarson; Kjartan B Orvar; Leonid Padyukov; Bardur Sigurgeirsson; Vinicius Tragante; Kristbjorg Bjarnadottir; Thorunn Rafnar; Gisli Masson; Patrick Sulem; Daniel F Gudbjartsson; Pall Melsted; Gudmar Thorleifsson; Gudmundur L Norddahl; Unnur Thorsteinsdottir; Ingileif Jonsdottir; Kari Stefansson
Journal:  Nature       Date:  2020-06-24       Impact factor: 49.962

Review 9.  The Lysophosphatidylserines-An Emerging Class of Signalling Lysophospholipids.

Authors:  Karthik Shanbhag; Amol Mhetre; Neha Khandelwal; Siddhesh S Kamat
Journal:  J Membr Biol       Date:  2020-08-07       Impact factor: 1.843

Review 10.  Immunogenetics of autoimmune thyroid diseases: A comprehensive review.

Authors:  Hanna J Lee; Cheuk Wun Li; Sara Salehi Hammerstad; Mihaela Stefan; Yaron Tomer
Journal:  J Autoimmun       Date:  2015-07-30       Impact factor: 7.094

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