Literature DB >> 23598277

APOBEC3 cytidine deaminases in double-strand DNA break repair and cancer promotion.

Roni Nowarski1, Moshe Kotler.   

Abstract

High frequency of cytidine to thymidine conversions was identified in the genome of several types of cancer cells. In breast cancer cells, these mutations are clustered in long DNA regions associated with single-strand DNA (ssDNA), double-strand DNA breaks (DSB), and genomic rearrangements. The observed mutational pattern resembles the deamination signature of cytidine to uridine carried out by members of the APOBEC3 family of cellular deaminases. Consistently, APOBEC3B (A3B) was recently identified as the mutational source in breast cancer cells. A3G is another member of the cytidine deaminases family predominantly expressed in lymphoma cells, where it is involved in mutational DSB repair following ionizing radiation treatments. This activity provides us with a new paradigm for cancer cell survival and tumor promotion and a mechanistic link between ssDNA, DSBs, and clustered mutations. Cancer Res; 73(12); 3494-8. ©2013 AACR. ©2013 AACR.

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Year:  2013        PMID: 23598277      PMCID: PMC3686885          DOI: 10.1158/0008-5472.CAN-13-0728

Source DB:  PubMed          Journal:  Cancer Res        ISSN: 0008-5472            Impact factor:   12.701


  50 in total

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2.  An anthropoid-specific locus of orphan C to U RNA-editing enzymes on chromosome 22.

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Review 3.  Focus on lymphomas.

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Journal:  Cancer Cell       Date:  2002-11       Impact factor: 31.743

Review 4.  Lessons from hereditary colorectal cancer.

Authors:  K W Kinzler; B Vogelstein
Journal:  Cell       Date:  1996-10-18       Impact factor: 41.582

5.  Post-replicative base excision repair in replication foci.

Authors:  M Otterlei; E Warbrick; T A Nagelhus; T Haug; G Slupphaug; M Akbari; P A Aas; K Steinsbekk; O Bakke; H E Krokan
Journal:  EMBO J       Date:  1999-07-01       Impact factor: 11.598

6.  APOBEC3B is an enzymatic source of mutation in breast cancer.

Authors:  Michael B Burns; Lela Lackey; Michael A Carpenter; Anurag Rathore; Allison M Land; Brandon Leonard; Eric W Refsland; Delshanee Kotandeniya; Natalia Tretyakova; Jason B Nikas; Douglas Yee; Nuri A Temiz; Duncan E Donohue; Rebecca M McDougle; William L Brown; Emily K Law; Reuben S Harris
Journal:  Nature       Date:  2013-02-06       Impact factor: 49.962

7.  Saccharomyces Ku70, mre11/rad50 and RPA proteins regulate adaptation to G2/M arrest after DNA damage.

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Review 8.  Multiple mutations and cancer.

Authors:  Lawrence A Loeb; Keith R Loeb; Jon P Anderson
Journal:  Proc Natl Acad Sci U S A       Date:  2003-01-27       Impact factor: 11.205

9.  Cytidine deamination of retroviral DNA by diverse APOBEC proteins.

Authors:  Kate N Bishop; Rebecca K Holmes; Ann M Sheehy; Nicholas O Davidson; Soo-Jin Cho; Michael H Malim
Journal:  Curr Biol       Date:  2004-08-10       Impact factor: 10.834

10.  DNA end resection, homologous recombination and DNA damage checkpoint activation require CDK1.

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Journal:  Nature       Date:  2004-10-21       Impact factor: 49.962

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  27 in total

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Journal:  J Virol       Date:  2020-01-31       Impact factor: 5.103

2.  Inhibition of APOBEC3G activity impedes double-stranded DNA repair.

Authors:  Ponnandy Prabhu; Shivender M D Shandilya; Elena Britan-Rosich; Adi Nagler; Celia A Schiffer; Moshe Kotler
Journal:  FEBS J       Date:  2015-11-06       Impact factor: 5.542

3.  Activation of DNA damage repair factors in HPV positive oropharyngeal cancers.

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Journal:  Virology       Date:  2020-05-22       Impact factor: 3.616

4.  Association of germline variants in the APOBEC3 region with cancer risk and enrichment with APOBEC-signature mutations in tumors.

Authors:  Candace D Middlebrooks; A Rouf Banday; Konichi Matsuda; Krizia-Ivana Udquim; Olusegun O Onabajo; Ashley Paquin; Jonine D Figueroa; Bin Zhu; Stella Koutros; Michiaki Kubo; Taro Shuin; Neal D Freedman; Manolis Kogevinas; Nuria Malats; Stephen J Chanock; Montserrat Garcia-Closas; Debra T Silverman; Nathaniel Rothman; Ludmila Prokunina-Olsson
Journal:  Nat Genet       Date:  2016-09-19       Impact factor: 38.330

5.  DNA Methylation-a Potential Source of Mitochondria DNA Base Mismatch in the Development of Diabetic Retinopathy.

Authors:  Manish Mishra; Renu A Kowluru
Journal:  Mol Neurobiol       Date:  2018-04-21       Impact factor: 5.590

6.  APOBEC3A functions as a restriction factor of human papillomavirus.

Authors:  Cody J Warren; Tao Xu; Kejun Guo; Laura M Griffin; Joseph A Westrich; Denis Lee; Paul F Lambert; Mario L Santiago; Dohun Pyeon
Journal:  J Virol       Date:  2014-10-29       Impact factor: 5.103

7.  Aberrant APOBEC3C expression induces characteristic genomic instability in pancreatic ductal adenocarcinoma.

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Journal:  Oncogenesis       Date:  2022-06-24       Impact factor: 6.524

8.  Targeted Deep Sequencing of Bladder Tumors Reveals Novel Associations between Cancer Gene Mutations and Mutational Signatures with Major Risk Factors.

Authors:  Debra T Silverman; Nathaniel Rothman; Michael Dean; Stella Koutros; Nina Rao; Lee E Moore; Michael L Nickerson; Donghyuk Lee; Bin Zhu; Larissa A Pardo; Dalsu Baris; Molly Schwenn; Alison Johnson; Kristine Jones; Montserrat Garcia-Closas; Ludmila Prokunina-Olsson
Journal:  Clin Cancer Res       Date:  2021-04-13       Impact factor: 13.801

Review 9.  Genomic heterogeneity in bladder cancer: challenges and possible solutions to improve outcomes.

Authors:  Joshua J Meeks; Hikmat Al-Ahmadie; Bishoy M Faltas; John A Taylor; Thomas W Flaig; David J DeGraff; Emil Christensen; Benjamin L Woolbright; David J McConkey; Lars Dyrskjøt
Journal:  Nat Rev Urol       Date:  2020-03-31       Impact factor: 14.432

10.  Alternative splicing of APOBEC3D generates functional diversity and its role as a DNA mutator.

Authors:  Hisashi Takei; Hirofumi Fukuda; Gilbert Pan; Hiroyuki Yamazaki; Tadahiko Matsumoto; Yasuhiro Kazuma; Masanori Fujii; Sohei Nakayama; Ikei S Kobayashi; Keisuke Shindo; Riu Yamashita; Kotaro Shirakawa; Akifumi Takaori-Kondo; Susumu S Kobayashi
Journal:  Int J Hematol       Date:  2020-06-12       Impact factor: 2.490

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