Literature DB >> 23596285

Identification of a pegivirus (GB virus-like virus) that infects horses.

Amit Kapoor1, Peter Simmonds, John M Cullen, Troels K H Scheel, Jan L Medina, Federico Giannitti, Eiko Nishiuchi, Kenny V Brock, Peter D Burbelo, Charles M Rice, W Ian Lipkin.   

Abstract

The recent identification of nonprimate hepaciviruses in dogs and then in horses prompted us to look for pegiviruses (GB virus-like viruses) in these species. Although none were detected in canines, we found widespread natural infection of horses by a novel pegivirus. Unique genomic features and phylogenetic analyses confirmed that the tentatively named equine pegivirus (EPgV) represents a novel species within the Pegivirus genus. We also determined that EPgV causes persistent viremia whereas its clinical significance is undetermined.

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Mesh：

Year:  2013        PMID： 23596285      PMCID： PMC3676142          DOI： 10.1128/JVI.00324-13

Source DB:  PubMed          Journal:  J Virol        ISSN： 0022-538X            Impact factor:   5.103


  18 in total

1.  RNA secondary structure prediction using stochastic context-free grammars and evolutionary history.

Authors:  B Knudsen; J Hein
Journal:  Bioinformatics       Date:  1999-06       Impact factor: 6.937

2.  Development of a primary tamarin hepatocyte culture system for GB virus-B: a surrogate model for hepatitis C virus.

Authors:  B Beames; D Chavez; B Guerra; L Notvall; K M Brasky; R E Lanford
Journal:  J Virol       Date:  2000-12       Impact factor: 5.103

3.  RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models.

Authors:  Alexandros Stamatakis
Journal:  Bioinformatics       Date:  2006-08-23       Impact factor: 6.937

4.  Dynamics of GB virus C viremia early after orthotopic liver transplantation indicates extrahepatic tissues as the predominant site of GB virus C replication.

Authors:  T Berg; A R Müller; K P Platz; M Höhne; W O Bechstein; U Hopf; B Wiedenmann; P Neuhaus; E Schreier
Journal:  Hepatology       Date:  1999-01       Impact factor: 17.425

5.  Serology-enabled discovery of genetically diverse hepaciviruses in a new host.

Authors:  Peter D Burbelo; Edward J Dubovi; Peter Simmonds; Jan L Medina; Jose A Henriquez; Nischay Mishra; Jason Wagner; Rafal Tokarz; John M Cullen; Michael J Iadarola; Charles M Rice; W Ian Lipkin; Amit Kapoor
Journal:  J Virol       Date:  2012-04-04       Impact factor: 5.103

6.  Identification of two flavivirus-like genomes in the GB hepatitis agent.

Authors:  J N Simons; T J Pilot-Matias; T P Leary; G J Dawson; S M Desai; G G Schlauder; A S Muerhoff; J C Erker; S L Buijk; M L Chalmers
Journal:  Proc Natl Acad Sci U S A       Date:  1995-04-11       Impact factor: 11.205

7.  Persistent GB virus C infection and survival in HIV-infected men.

Authors:  Carolyn F Williams; Donna Klinzman; Traci E Yamashita; Jinhua Xiang; Philip M Polgreen; Charles Rinaldo; Chenglong Liu; John Phair; Joseph B Margolick; Dietmar Zdunek; Georg Hess; Jack T Stapleton
Journal:  N Engl J Med       Date:  2004-03-04       Impact factor: 91.245

8.  The Vienna RNA websuite.

Authors:  Andreas R Gruber; Ronny Lorenz; Stephan H Bernhart; Richard Neuböck; Ivo L Hofacker
Journal:  Nucleic Acids Res       Date:  2008-04-19       Impact factor: 16.971

9.  Development of Global Consensus Sequence and Analysis of Highly Conserved Domains of the HCV NS5B Prote in.

Authors:  Yasir Waheed; Umar Saeed; Sadia Anjum; Mohammad Sohail Afzal; Muhammad Ashraf
Journal:  Hepat Mon       Date:  2012-09-25       Impact factor: 0.660

10.  MUSCLE: a multiple sequence alignment method with reduced time and space complexity.

Authors:  Robert C Edgar
Journal:  BMC Bioinformatics       Date:  2004-08-19       Impact factor: 3.169
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  42 in total

1.  Characterization of nonprimate hepacivirus and construction of a functional molecular clone.

Authors:  Troels K H Scheel; Amit Kapoor; Eiko Nishiuchi; Kenny V Brock; Yingpu Yu; Linda Andrus; Meigang Gu; Randall W Renshaw; Edward J Dubovi; Sean P McDonough; Gerlinde R Van de Walle; W Ian Lipkin; Thomas J Divers; Bud C Tennant; Charles M Rice
Journal:  Proc Natl Acad Sci U S A       Date:  2015-02-02       Impact factor: 11.205

2.  The Prevalence, Genetic Characterization, and Evolutionary Analysis of Porcine Pegivirus in Guangdong, China.

Authors:  Yongsheng Xie; Xiaoru Wang; Junsen Feng; Liuming Wei; Gen Li; Guangbin Si; Yibo Chen; He Yan; Dongsheng He
Journal:  Virol Sin       Date:  2020-07-08       Impact factor: 4.327

Review 3.  The Strange, Expanding World of Animal Hepaciviruses.

Authors:  Alex S Hartlage; John M Cullen; Amit Kapoor
Journal:  Annu Rev Virol       Date:  2016-09-29       Impact factor: 10.431

4.  Identification of a Novel Hepacivirus in Domestic Cattle from Germany.

Authors:  Christine Baechlein; Nicole Fischer; Adam Grundhoff; Malik Alawi; Daniela Indenbirken; Alexander Postel; Anna Lena Baron; Jennifer Offinger; Kathrin Becker; Andreas Beineke; Juergen Rehage; Paul Becher
Journal:  J Virol       Date:  2015-04-29       Impact factor: 5.103

5.  Deep sequencing identifies two genotypes and high viral genetic diversity of human pegivirus (GB virus C) in rural Ugandan patients.

Authors:  Ria R Ghai; Samuel D Sibley; Michael Lauck; Jorge M Dinis; Adam L Bailey; Colin A Chapman; Patrick Omeja; Thomas C Friedrich; David H O'Connor; Tony L Goldberg
Journal:  J Gen Virol       Date:  2013-09-28       Impact factor: 3.891

Review 6.  Surveying the global virome: identification and characterization of HCV-related animal hepaciviruses.

Authors:  Troels K H Scheel; Peter Simmonds; Amit Kapoor
Journal:  Antiviral Res       Date:  2014-12-26       Impact factor: 5.970

7.  X-ray structure of the pestivirus NS3 helicase and its conformation in solution.

Authors:  M Alejandra Tortorici; Stéphane Duquerroy; Jane Kwok; Clemens Vonrhein; Javier Perez; Benjamin Lamp; Gerard Bricogne; Till Rümenapf; Patrice Vachette; Félix A Rey
Journal:  J Virol       Date:  2015-02-04       Impact factor: 5.103

8.  The First Nonmammalian Pegivirus Demonstrates Efficient In Vitro Replication and High Lymphotropism.

Authors:  Zhen Wu; Yuanyuan Wu; Wei Zhang; Andres Merits; Peter Simmonds; Mingshu Wang; Renyong Jia; Dekang Zhu; Mafeng Liu; Xinxin Zhao; Qiao Yang; Ying Wu; ShaQiu Zhang; Juan Huang; Xumin Ou; Sai Mao; YunYa Liu; Ling Zhang; YanLing Yu; Bin Tian; Leichang Pan; Mujeeb Ur Rehman; Shun Chen; Anchun Cheng
Journal:  J Virol       Date:  2020-09-29       Impact factor: 5.103

Review 9.  In vivo models of hepatitis B and C virus infection.

Authors:  Benjamin Y Winer; Qiang Ding; Jenna M Gaska; Alexander Ploss
Journal:  FEBS Lett       Date:  2016-04-08       Impact factor: 4.124

10.  First report of equine parvovirus-hepatitis-associated Theiler's disease in Europe.

Authors:  Modest Vengust; Mason C Jager; Valentina Zalig; Vasilij Cociancich; Melissa Laverack; Randall W Renshaw; Edward Dubovi; Joy E Tomlinson; Gerlinde R Van de Walle; Thomas J Divers
Journal:  Equine Vet J       Date:  2020-03-25       Impact factor: 2.888
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