| Literature DB >> 23593326 |
Xin Zhou1, Yang Gu, Ding-Ning Wang, Sha Ni, Jun Yan.
Abstract
BACKGROUND ANDEntities:
Mesh:
Substances:
Year: 2013 PMID: 23593326 PMCID: PMC3620469 DOI: 10.1371/journal.pone.0060851
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Figure 1Flow chart of literature search and study selection.
Characteristics of included studies in this meta-analysis.
| Firstauthor[Ref] | Year | Country | Ethnicity | Number | Source | Sample | Genotypemethods | Gene | SNP ID | Alternatenames | Qualityscores | ||
| Case | Control | Case | Control | ||||||||||
| Weiderpasset al | 2000 | Sweden | Caucasian | 261 | 380 | PB | PB | Blood | PCR-RFLP | ESR1 | rs2234693 (C)T) | PvuII | 27 |
| rs9340799 (A>G) | XbaI | ||||||||||||
| VNTR (S/L) | VNTR | ||||||||||||
| Sasakiet al | 2002 | USA | Asian | 113 | 200 | HB | PB | Blood | DNA sequencing | ESR1 | rs2234693 (C>T) | PvuII | |
| rs4986934 (C>T) | Codon 243 | ||||||||||||
| rs1801132 (C>G) | Codon 325 | ||||||||||||
| Iwamotoet al | 2003 | Japan | Asian | 92 | 65 | HB | HB | Blood | PCR-RFLP | ESR1 | rs2234693 (C>T) | PvuII | 26 |
| rs9340799 (A>G) | XbaI | ||||||||||||
| Shanet al | 2003 | China | Asian | 52 | 52 | HB | HB | Blood | PCR-RFLP | ESR1 | rs9340799 (A>G) | XbaI | 23 |
| rs2234693 (C>T) | PvuII | ||||||||||||
| Yanget al | 2007 | China | Asian | 87 | 90 | HB | HB | Tissue | PCR-RFLP | ESR1 | rs9340799 (A>G) | XbaI | 24 |
| rs2234693 (C>T) | PvuII | ||||||||||||
| Wedrenet al | 2008 | Sweden | Caucasian | 702 | 1563 | PB | PB | Tissue | DNA sequencing | ESR1 | rs2234670 (S/L) | STR | 26 |
| rs2234693 (C>T) | PvuII | ||||||||||||
| rs9340799 (A>G) | XbaI | ||||||||||||
| rs4986934 (C>T) | Codon 243 | ||||||||||||
| rs1801132 (C>G) | Codon 325 | ||||||||||||
| Sobczuket al | 2009 | Poland | Caucasian | 120 | 120 | HB | HB | Tissue | PCR-RFLP | ESR1 | rs9340799 (A>G) | XbaI | 24 |
| rs2234693 (C>T) | PvuII | ||||||||||||
| Ashtonet al | 2010 | Australia | Caucasian | 191 | 291 | HB | PB | Blood | DNA sequencing | ESR1 | VNTR (S/L) | VNTR | 25 |
| Sliwinskiet al | 2010 | Poland | Caucasian | 100 | 100 | HB | HB | Blood | PCR-RFLP | ESR1 | rs1801132 (C>G) | Codon 325 | 24 |
| Yanget al | 2010 | USA | Caucasian | 417 | 407 | PB | PB | Blood | BeadArray | ESR1 | rs2234693 (C>T) | PvuII | 32 |
| rs9340799 (A>G) | XbaI | ||||||||||||
| rs4986934 (C>T) | Codon 243 | ||||||||||||
| rs1801132 (C>G) | Codon 325 | ||||||||||||
| rs3020314 (C>T) | – | ||||||||||||
| Li et al | 2011 | China | Asian | 935 | 947 | PB | PB | Blood/Tissue | TaqMan assay | ESR1 | rs2046210 (G>A) | – | 34 |
| Healeyet al | 2011 | UK | Caucasian | 4188 | 11928 | HB | PB | Blood | MassArray | ESR1 | rs3020314 (C>T) | – | 33 |
| Lundinet al | 2012 | Sweden | Caucasian | 391 | 712 | HB | HB | Blood | TaqMan assay | ESR1 | rs2234693 (C>T) | PvuII | 31 |
Ref = reference; HB = hospital-based; PB = population-based; PCR-RELP = polymerase chain reaction-restriction fragment length polymorphism.
Figure 2Forest plot of ORs by random effects model for ESR1 PvuII (C>T) polymorphism and endometrial cancer risk under the allele and homozygous models.
Meta-analysis of the associations between ESR1 PvuII and XbaI polymorphisms and endometrial cancer risk.
| Subgroups | 2 allele vs. 1 allele (allele model) | 1/2+2/2 vs. 1/1 (dominant model) | 2/2 vs. 1/1+ ½ (recessive model) | 2/2 vs. 1/1 (homozygous model) | 2/2 vs. ½ (heterozygous model) | ||||||||||
| OR | [95%CI] |
| OR | [95%CI] |
| OR | [95%CI] |
| OR | [95%CI] |
| OR | [95%CI] |
| |
| rs2234693 (PvuII) | |||||||||||||||
| Overall | 1.08 | [1.00, 1.17] | 0.043 | 1.12 | [0.98, 1.28] | 0.098 | 1.11 | [0.98, 1.25] | 0.091 | 1.18 | [1.01, 1.38] | 0.043 | 1.08 | [0.95, 1.23] | 0.243 |
|
| |||||||||||||||
| Caucasian | 1.10 | [1.01, 1.19] | 0.030 | 1.12 | [0.97, 1.30] | 0.113 | 1.14 | [1.00, 1.30] | 0.047 | 1.21 | [1.02, 1.43] | 0.027 | 1.11 | [0.97, 1.28] | 0.129 |
| Asian | 1.00 | [0.81, 1.24] | 0.993 | 1.09 | [0.77, 1.55] | 0.615 | 0.92 | [0.65, 1.30] | 0.627 | 0.97 | [0.62, 1.52] | 0.902 | 0.88 | [0.61, 1.28] | 0.509 |
|
| |||||||||||||||
| Population-based | 1.12 | [1.02, 1.23] | 0.023 | 1.20 | [1.02, 1.42] | 0.027 | 1.12 | [0.97, 1.30] | 0.116 | 1.26 | [1.04, 1.53] | 0.017 | 1.07 | [0.92, 1.25] | 0.400 |
| Hospital-based | 1.02 | [0.89, 1.17] | 0.792 | 0.97 | [0.78, 1.22] | 0.771 | 1.08 | [0.87, 1.34] | 0.489 | 1.01 | [0.77, 1.34] | 0.941 | 1.11 | [0.88, 1.40] | 0.379 |
|
| |||||||||||||||
| PCR-RFLP | 1.06 | [0.91, 1.24] | 0.473 | 1.13 | [0.87, 1.48] | 0.365 | 1.04 | [0.81, 1.33] | 0.767 | 1.12 | [0.81, 1.54] | 0.509 | 1.01 | [0.77, 1.31] | 0.968 |
| DNA sequencing | 1.17 | [1.03, 1.32] | 0.013 | 1.31 | [1.06, 1.62] | 0.014 | 1.18 | [0.97, 1.42] | 0.096 | 1.40 | [1.09, 1.80] | 0.009 | 1.09 | [0.89, 1.33] | 0.403 |
| Other methods | 1.01 | [0.89, 1.15] | 0.884 | 0.94 | [0.75, 1.17] | 0.557 | 1.09 | [0.89, 1.33] | 0.415 | 1.01 | [0.78, 1.31] | 0.950 | 1.12 | [0.91, 1.39] | 0.285 |
| rs9340799 (XbaI) | |||||||||||||||
| Overall | 1.07 | [0.89, 1.29] | 0.459† | 1.19 | [0.97, 1.45] | 0.099 | 1.07 | [0.84, 1.36] | 0.598† | 1.15 | [0.79, 1.67] | 0.464† | 1.11 | [0.97, 1.27] | 0.116 |
|
| |||||||||||||||
| Caucasian | 1.07 | [0.89, 1.29] | 0.462 | 1.16 | [0.93, 1.43] | 0.183 | 1.10 | [0.86, 1.40] | 0.451 | 1.13 | [0.79, 1.63] | 0.500 | 1.14 | [0.99, 1.31] | 0.079 |
| Asian | 1.06 | [0.58, 1.93] | 0.850 | 1.45 | [0.79, 2.67] | 0.232 | 0.96 | [0.46, 2.00] | 0.921 | 1.38 | [0.35, 5.41] | 0.642 | 0.94 | [0.63, 1.42] | 0.783 |
|
| |||||||||||||||
| Population-based | 1.09 | [0.88, 1.36] | 0.435 | 1.17 | [0.93, 1.48] | 0.173 | 1.13 | [0.87, 1.48] | 0.368 | 1.17 | [0.76, 1.81] | 0.476 | 1.15 | [0.99, 1.33] | 0.055 |
| Hospital-based | 1.04 | [0.70, 1.54] | 0.848 | 1.23 | [0.80, 1.88] | 0.345 | 0.94 | [0.56, 1.58] | 0.828 | 1.15 | [0.50, 2.65] | 0.739 | 0.91 | [0.64, 1.29] | 0.600 |
|
| |||||||||||||||
| PCR-RFLP | 1.07 | [0.82, 1.40] | 0.607 | 1.17 | [0.84, 1.62] | 0.349 | 1.03 | [0.72, 1.48] | 0.861 | 1.15 | [0.68, 1.95] | 0.609 | 1.06 | [0.84, 1.35] | 0.625 |
| DNA sequencing | 1.26 | [1.10, 1.46] | 0.001 | 1.41 | [1.03, 1.93] | 0.033 | 1.33 | [1.10, 1.60] | 0.003 | 1.59 | [1.14, 2.21] | 0.006 | 1.28 | [1.05, 1.55] | 0.015 |
| Other methods | 0.88 | [0.72, 1.09] | 0.243 | 0.82 | [0.51, 1.31] | 0.402 | 0.87 | [0.66, 1.14] | 0.302 | 0.77 | [0.48, 1.26] | 0.303 | 0.89 | [0.67, 1.18] | 0.417 |
OR = odds ratios; 95%CI = 95% confidence interval; 1 = wild allele; 2 = mutant allele; 1/1 = wild homozygote; 1/2 = heterozygote; 2/2 = mutant homozygote; P = P value of heterogeneity test; † = estimates for random effects model.
Figure 3Sensitivity analysis of the summary ORs under the allele model on the association between ESR1 PvuII and XbaI polymorphisms with endometrial cancer risk.
Results were computed by omitting each study in turn. Meta-analysis random-effects estimates (exponential form) were used. The two ends of the dotted lines represent the 95%CI.
Figure 4Begger’s funnel plot of the meta-analysis of ESR1 PvuII and XbaI polymorphisms and endometrial cancer risk.
Each point represents a separate study for the indicated association. Log[OR], natural logarithm of OR. Horizontal line, mean magnitude of the effect. Note: Funnel plot with pseudo 95% confidence limits was used.