| Literature DB >> 23593180 |
Paola R Luz1, Angelica B W Boldt, Caroline Grisbach, Jürgen F J Kun, Thirumalaisamy P Velavan, Iara J T Messias-Reason.
Abstract
BACKGROUND: L-ficolin (encoded by FCN2) binds to acetylated sugar moieties of many pathogens, including Trypanosoma cruzi, promoting their phagocytosis and lysis by the complement system.Entities:
Mesh:
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Year: 2013 PMID: 23593180 PMCID: PMC3617223 DOI: 10.1371/journal.pone.0060237
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Demographic and clinical parameters of chronic Chagas patients.
| Parameters | Chagas form | Indeterminate | Cardiac | Digestive | Cardiodigestive |
| N | 88 | 96 | 23 | 33 | |
| Age | Average: | 54.6 | 58.9 | 59.3 | 58.2 |
| (years) | [Min-Max] | [34–76] | [34–90] | [36–84] | [37–73] |
| Gender | Female: | 38.6 | 50.0 | 78.3 | 42.4 |
| (% ) | Male: | 61.4 | 50.0 | 21.7 | 57.6 |
| Ethnic group | European: | 87.5 | 67.7 | 65.2 | 78.8 |
| (%) | African: | 9.1 | 26.0 | 30.4 | 18.2 |
| Asian: | 0 | 1.0 | 4.3 | 0 | |
| Amerindian: | 3.4 | 5.2 | 0 | 3 | |
| Class of cardiac Commitment | A: | 3.4 | 24.0 | N.d. | 33.3 |
| B1: | 2.3 | 25.0 | N.d. | 21.2 | |
| B2: | 0 | 3.1 | N.d. | 0 | |
| C: | 1.1 | 36.4 | N.d. | 33.3 | |
| D: | 0 | 20.8 | N.d. | 6.1 | |
| Left ventricular ejection fraction (%) | (N) Average: [Min-Max] | (47) 132.8 [35–78] | (79) 58 [24–84] | N.d. | (31) 55.1 [23–81] |
| C-reactive protein | (N) Average: [Min-Max] | (28) 0.74 [0.08–3.77] | (47) 0.66 [0.08–4.25] | (4) 0.19 [0.09–0.31] | (11) 0.33 [0.08–0.76] |
| Mannose-binding lectin | (N) Average: [Min-Max] | (53) 3514 [42–6379] | (58) 2270 [50–7214] | (15) 1909 [50–5465] | (20) 2222 [50–5600] |
MBL levels were determined by ELISA and C-reactive protein (hs-CRP) by nephelometry as previously described [6] n number of investigated samples; N.d. not determined.
some patients were unspecified.
Primers used in the sequence-specific PCR (PCR-SSP) for the −986, −602 and −4 promoter FCN2 polymorphisms.
| Forward Primer | Reverse primer | size | ||
| PCR-SSP Prom1,2 | ||||
|
| 5′ | FCN2 Prom −602 Ar | 5′ | 374 bp |
|
| 5′ | FCN2 Prom −602 Gr | 5′ | 374 bp |
| PCR-SSP Prom2,3 | ||||
|
| 5′ | FCN2 Prom −4 Ar | 5′ | 648 bp |
|
| 5′ | FCN2 Prom −4 Gr | 5′ | 648 bp |
| PCR-SSP Prom1,3 | ||||
|
| 5′ | FCN2 Prom −4 Ar | 5′ | 1022 bp |
|
| 5′ | FCN2 Prom −4 Gr | 5′ | 1022 bp |
| Endogenous control | ||||
| HGH f | 5′ | HGH r | 5′ | 431 bp |
| FCN2 Ex8f | 5′ | FCN2 Ex8r | 5′ | 500 bp |
Primer design was based on the NT_019501 reference sequence. FCN2– Ficolin 2; HGH – Human Growth Hormone; f – forward; r – reverse; In bold: variant nucleotides; bp – base pairs; Prom – promoter; Ex8– exon 8.
Figure 1L-ficolin levels in Chagas patients and controls.
The statistical distribution is shown with median (line in the box), box indicating the 25–75 percentiles, whiskers the 5–95 percentile and arithmetic mean (cross inside the box).
Figure 2Distribution of L-ficolin levels based on age and clinical classification.
(A) L-ficolin levels in Chagas patients and controls according to age (B) L-ficolin levels in Chagas patients and controls based on class of cardiac commitment. The statistical distribution is shown with median and interquartile range. One outlier (18880.7 ng/ml) was excluded for better visualization in the 45–59 group of patients.
FCN2 allele and haplotype frequencies (± standard deviation) in Chagas patients and controls.
| FCN2N | Controls610 | Patients486 | Indeterminate176 | Symptomatic304 | Cardiac192 | Digestive46 | Associated66 |
| −986 G>A | 50.0±2.5 | 43.4±2.3 | 46.0±3.8 | 41.4±2.8 | 40.6±3.6 | 43.5±7.4 | 42.4±6.1 |
| −602 G>A | 19.3±2.0 | 17.9±1.7 | 19.3±3.0 | 16.8±2.1 | 16.7±2.7 | 15.2±5.4 | 18.2±4.8 |
| −4 A>G | 23.4±2.2 | 20.6±1.8 | 20.5±3.0 | 20.7±2.3 | 19.3±2.9 | 23.9±6.4 | 22.7±5.2 |
| A258S | 10.7±1.9 | 15.2±1.6 | 13.6±2.6 | 16.1±2.1 | 14.6±2.6 | 15.2±5.4 | 21.2±5.1 |
| AAAA | 19.3±2.0 | 17.9±1.7 | 19.3±3.0 | 16.8±2.1 | 16.7±2.7 | 15.2±5.3 | 18.2±4.8 |
| AGGA | 23.4±2.2 | 20.6±1.8 | 20.5±3.0 | 20.7±2.3 | 19.3±2.9 | 23.9±6.4 | 22.7±5.2 |
| AGAA | 7.3±1.3 | 4.9±1.0 | 6.3±1.8 | 3.9±1.1 | 4.7±1.5 | 4.3±3.0 | 1.5±1.5 |
| GGA | 52.0±2.0 | 56.6±2.3 | 54.0±3.8 | 58.6±2.8 | 59.4±3.6 | 56.5±7.4 | 57.6±6.1 |
| GGAA | 41.1±3.0 | 41.4±2.2 | 40.3±3.7 | 42.4±2.8 | 44.8±3.6 | 41.3±7.3 | 36.4±6.0 |
| GGAS | 10.7±1.9 | 15.2±1.6 | 13.6±2.6 | 16.1±2.1 | 14.6±2.6 | 15.2±5.4 | 21.2±5.1 |
In bold: significant difference (see text).
A258S was investigated by sequencing in a subset of 135 samples. N number of chromosomes.
FCN2 genotype frequencies (%) in Chagas patients and controls.
| FCN2N | Controls305 | Patients243 | Indeterminate88 | Symptomatic152 | Cardiac96 | Digestive23 | Associated33 |
| AAAA/AAAA | 10 (3.3) | 6 (2.5) | 3 (3.4) | 3 (2.0) | 2 (2.1) | 0 | 1 (3.0) |
| AAAA/AGAA | 6 (2.0) | 7 (2.9) | 3 (3.4) | 4 (2.6) | 3 (3.1) | 0 | 1 (3.0) |
|
|
| 14 (5.8) | 7 (8.0) | 6 (4.0) |
| 2 (8.7) | 1 (3.0) |
| AAAA/GGAA | 20 (14.8) | 36 (14.8) | 11 (12.5) | 25 (16.4) | 15 (15.6) | 4 (17.4) | 6 (18.2) |
| AAAA/GGAS | 7 (5.2) | 18 (7.4) | 7 (8.0) | 10 (6.6) | 7 (7.3) | 1 (4.3) | 2 (6.1) |
| AAA/GGA | 57 (18.7) | 54 (22.2) | 18 (20.5) | 35 (23.0) | 22 (22.9) | 5 (21.7) | 8 (24.2) |
| AGAA/AGAA | 0 | 1 (0.4) | 1 (1.1) | 0 | 0 | 0 | 0 |
|
|
| 4 (1.6) | 3 (3.4) | 1 (0.7) |
| 0 | 0 |
| AGAA/GGAA | 7 (5.2) | 9 (3.7) | 1 (1.1) | 7 (4.6) | 5 (5.2) | 2 (8.7) | 0 |
| AGAA/GGAS | 2 (1.5) | 2 (0.8) | 2 (2.3) | 0 | 0 | 0 | 0 |
| AGA/GGA | 27 (8.9) | 11 (4.5) | 3 (3.4) | 7 (4.6) | 5 (5.2) | 2 (8.7) | 0 |
| AGGA/AGGA | 18 (5.9) | 12 (4.9) | 2 (2.3) | 10 (6.6) | 7 (7.3) | 2 (8.7) | 1 (3.0) |
| AGGA/GGAA | 31 (23.0) | 36 (14.8) | 15 (17.0) | 21 (13.8) | 12 (12.5) | 3 (13.0) | 6 (18.2) |
|
|
| 22 (9.1) |
| 15 (9.9) | 7 (7.3) | 2 (8.7) |
|
|
|
| 58 (23.9) | 22 (25.0) | 36 (23.7) |
| 5 (21.7) | 12 (36.4) |
| GGAA/GGAA | 18 (13.3) | 47 (19.3) | 19 (21.6) | 28 (18.4) | 20 (20.8) | 3 (13.0) | 5 (15.2) |
| GGAA/GGAS | 17 (12.6) | 26 (10.7) | 6 (6.8) | 20 (13.2) | 14 (14.6) | 4 (17.4) | 2 (6.1) |
| GGAS/GGAS |
| 3 (1.2) |
| 2 (1.3) | 0 | 0 |
|
| GGA/GGA | 77 (25.2) | 76 (31.3) | 26 (29.5) | 50 (32.9) | 34 (35.4) | 7 (30.4) | 9 (27.3) |
In bold: genotypes with −4 A/G heterozygosity, whose summed frequencies differ between cardiac patients and controls. Gray-shadowed: genotypes AGGA/GGAS and GGAS/GGAS (homozygote for A258S), whose summed frequencies differ between cardiodigestive patients and indeterminate patients or controls (see text).
A258S was investigated by sequencing in a subset of 135 controls. n number of individuals.
Figure 3Distribution of L-ficolin levels based on genotypic variant and disease stages.
(A) L-ficolin levels in Chagas patients and controls by the presence of 258S variant and (B) Distribution of L-ficolin levels in Chagas patients and controls by disease stages. The statistical distribution is shown with median and interquartile range. Closed dots: samples with −4 A/G genotype. Closed boxes: samples with −4 A/G and 258A/S (AGGA/GGAS genotype) or 258S/S homozygotes (GGAS/GGAS genotype).