Literature DB >> 23584531

Structural insights into oligomerization and mitochondrial remodelling of dynamin 1-like protein.

Chris Fröhlich1, Stefan Grabiger, David Schwefel, Katja Faelber, Eva Rosenbaum, Jason Mears, Oliver Rocks, Oliver Daumke.   

Abstract

Dynamin 1-like protein (DNM1L) mediates fission of mitochondria and peroxisomes, and dysfunction of DNM1L has been implicated in several neurological disorders. To study the molecular basis of mitochondrial remodelling, we determined the crystal structure of DNM1L that is comprised of a G domain, a bundle signalling element and a stalk. DNM1L assembled via a central stalk interface, and mutations in this interface disrupted dimerization and interfered with membrane binding and mitochondrial targeting. Two sequence stretches at the tip of the stalk were shown to be required for ordered assembly of DNM1L on membranes and its function in mitochondrial fission. In the crystals, DNM1L dimers further assembled via a second, previously undescribed, stalk interface to form a linear filament. Mutations in this interface interfered with liposome tubulation and mitochondrial remodelling. Based on these results and electron microscopy reconstructions, we propose an oligomerization mode for DNM1L which differs from that of dynamin and might be adapted to the remodelling of mitochondria.

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Year:  2013        PMID: 23584531      PMCID: PMC3642683          DOI: 10.1038/emboj.2013.74

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  71 in total

1.  A lethal defect of mitochondrial and peroxisomal fission.

Authors:  Hans R Waterham; Janet Koster; Carlo W T van Roermund; Petra A W Mooyer; Ronald J A Wanders; James V Leonard
Journal:  N Engl J Med       Date:  2007-04-26       Impact factor: 91.245

Review 2.  Structural insights into dynamin-mediated membrane fission.

Authors:  Katja Faelber; Martin Held; Song Gao; York Posor; Volker Haucke; Frank Noé; Oliver Daumke
Journal:  Structure       Date:  2012-10-10       Impact factor: 5.006

3.  Analysis of mitochondrial dynamics and functions using imaging approaches.

Authors:  Kasturi Mitra; Jennifer Lippincott-Schwartz
Journal:  Curr Protoc Cell Biol       Date:  2010-03

Review 4.  Mitochondria and degenerative disorders.

Authors:  M Orth; A H Schapira
Journal:  Am J Med Genet       Date:  2001

5.  Parkin ubiquitinates Drp1 for proteasome-dependent degradation: implication of dysregulated mitochondrial dynamics in Parkinson disease.

Authors:  Hongxia Wang; Pingping Song; Lei Du; Weili Tian; Wen Yue; Min Liu; Dengwen Li; Bin Wang; Yushan Zhu; Cheng Cao; Jun Zhou; Quan Chen
Journal:  J Biol Chem       Date:  2011-02-03       Impact factor: 5.157

6.  Dynamin self-assembles into rings suggesting a mechanism for coated vesicle budding.

Authors:  J E Hinshaw; S L Schmid
Journal:  Nature       Date:  1995-03-09       Impact factor: 49.962

Review 7.  Mitochondrial fusion and division: Regulation and role in cell viability.

Authors:  Giovanni Benard; Mariusz Karbowski
Journal:  Semin Cell Dev Biol       Date:  2009-05       Impact factor: 7.727

8.  Mitochondrial fission and cristae disruption increase the response of cell models of Huntington's disease to apoptotic stimuli.

Authors:  Veronica Costa; Marta Giacomello; Roman Hudec; Raffaele Lopreiato; Gennady Ermak; Dmitri Lim; Walter Malorni; Kelvin J A Davies; Ernesto Carafoli; Luca Scorrano
Journal:  EMBO Mol Med       Date:  2010-12       Impact factor: 12.137

9.  Mff is an essential factor for mitochondrial recruitment of Drp1 during mitochondrial fission in mammalian cells.

Authors:  Hidenori Otera; Chunxin Wang; Megan M Cleland; Kiyoko Setoguchi; Sadaki Yokota; Richard J Youle; Katsuyoshi Mihara
Journal:  J Cell Biol       Date:  2010-12-13       Impact factor: 10.539

10.  Human MIEF1 recruits Drp1 to mitochondrial outer membranes and promotes mitochondrial fusion rather than fission.

Authors:  Jian Zhao; Tong Liu; Shaobo Jin; Xinming Wang; Mingqi Qu; Per Uhlén; Nikolay Tomilin; Oleg Shupliakov; Urban Lendahl; Monica Nistér
Journal:  EMBO J       Date:  2011-06-24       Impact factor: 11.598

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  121 in total

Review 1.  Plant mitochondrial dynamics and the role of membrane lipids.

Authors:  Ronghui Pan; Jianping Hu
Journal:  Plant Signal Behav       Date:  2015-08-28

2.  Isolation and Analysis of Mitochondrial Fission Enzyme DNM1 from Saccharomyces cerevisiae.

Authors:  Nolan W Kennedy; Lora K Picton; R Blake Hill
Journal:  Methods Mol Biol       Date:  2020

3.  A brain-enriched Drp1 isoform associates with lysosomes, late endosomes, and the plasma membrane.

Authors:  Kie Itoh; Yoshihiro Adachi; Tatsuya Yamada; Takamichi L Suzuki; Takanobu Otomo; Heidi M McBride; Tamotsu Yoshimori; Miho Iijima; Hiromi Sesaki
Journal:  J Biol Chem       Date:  2018-05-31       Impact factor: 5.157

4.  Coincident Phosphatidic Acid Interaction Restrains Drp1 in Mitochondrial Division.

Authors:  Yoshihiro Adachi; Kie Itoh; Tatsuya Yamada; Kara L Cerveny; Takamichi L Suzuki; Patrick Macdonald; Michael A Frohman; Rajesh Ramachandran; Miho Iijima; Hiromi Sesaki
Journal:  Mol Cell       Date:  2016-09-15       Impact factor: 17.970

5.  Structural and functional characterization of the dominant negative P-loop lysine mutation in the dynamin superfamily protein Vps1.

Authors:  Bryan A Tornabene; Natalia V Varlakhanova; Christopher J Hosford; Joshua S Chappie; Marijn G J Ford
Journal:  Protein Sci       Date:  2020-01-31       Impact factor: 6.725

Review 6.  In vivo functions of Drp1: lessons learned from yeast genetics and mouse knockouts.

Authors:  Hiromi Sesaki; Yoshihiro Adachi; Yusuke Kageyama; Kie Itoh; Miho Iijima
Journal:  Biochim Biophys Acta       Date:  2013-12-08

7.  Novel role of dynamin-related-protein 1 in dynamics of ER-lipid droplets in adipose tissue.

Authors:  Xin Li; Li Yang; Zhengmei Mao; Xueyang Pan; Yueshui Zhao; Xue Gu; Kristin Eckel-Mahan; Zhongyuan Zuo; Qiang Tong; Sean M Hartig; Xiaodong Cheng; Guangwei Du; David D Moore; Hugo J Bellen; Hiromi Sesaki; Kai Sun
Journal:  FASEB J       Date:  2020-04-15       Impact factor: 5.191

Review 8.  Mitochondrial dysfunction induces muscle atrophy during prolonged inactivity: A review of the causes and effects.

Authors:  Hayden Hyatt; Rafael Deminice; Toshinori Yoshihara; Scott K Powers
Journal:  Arch Biochem Biophys       Date:  2018-11-16       Impact factor: 4.013

9.  Dynamin-related Protein 1 Oligomerization in Solution Impairs Functional Interactions with Membrane-anchored Mitochondrial Fission Factor.

Authors:  Ryan W Clinton; Christopher A Francy; Rajesh Ramachandran; Xin Qi; Jason A Mears
Journal:  J Biol Chem       Date:  2015-11-17       Impact factor: 5.157

10.  Distinct Splice Variants of Dynamin-related Protein 1 Differentially Utilize Mitochondrial Fission Factor as an Effector of Cooperative GTPase Activity.

Authors:  Patrick J Macdonald; Christopher A Francy; Natalia Stepanyants; Lance Lehman; Anthony Baglio; Jason A Mears; Xin Qi; Rajesh Ramachandran
Journal:  J Biol Chem       Date:  2015-11-17       Impact factor: 5.157

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