Literature DB >> 23579437

NCI think tank concerning the identifiability of biospecimens and "omic" data.

Carol J Weil1, Leah E Mechanic, Tiffany Green, Christopher Kinsinger, Nicole C Lockhart, Stefanie A Nelson, Laura L Rodriguez, Laura D Buccini.   

Abstract

PURPOSE: On 11 and 12 June 2012, the National Cancer Institute hosted a think tank concerning the identifiability of biospecimens and "omic" data in order to explore challenges surrounding this complex and multifaceted topic.
METHODS: The think tank brought together 46 leaders from several fields, including cancer genomics, bioinformatics, human subject protection, patient advocacy, and commercial genetics.
RESULTS: The first day involved presentations regarding the state of the science of reidentification; current and proposed regulatory frameworks for assessing identifiability; developments in law, industry, and biotechnology; and the expectations of patients and research participants. The second day was spent by think tank participants in small breakout groups designed to address specific subtopics under the umbrella issue of identifiability, including considerations for the development of best practices for data sharing and consent, and targeted opportunities for further empirical research.
CONCLUSION: We describe the outcomes of this 2-day meeting, including two complementary themes that emerged from moderated discussions following the presentations on day 1, and ideas presented for further empirical research to discern the preferences and concerns of research participants about data sharing and individual identifiability.

Entities:  

Mesh:

Year:  2013        PMID: 23579437      PMCID: PMC4097316          DOI: 10.1038/gim.2013.40

Source DB:  PubMed          Journal:  Genet Med        ISSN: 1098-3600            Impact factor:   8.822


  14 in total

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3.  Bayesian method to predict individual SNP genotypes from gene expression data.

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4.  The privacy-reciprocity connection in biobanking: comparing German with UK strategies.

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5.  Ethics. Identifiability in genomic research.

Authors:  William W Lowrance; Francis S Collins
Journal:  Science       Date:  2007-08-03       Impact factor: 47.728

6.  Medicine. Reestablishing the researcher-patient compact.

Authors:  Isaac S Kohane; Kenneth D Mandl; Patrick L Taylor; Ingrid A Holm; Daniel J Nigrin; Louis M Kunkel
Journal:  Science       Date:  2007-05-11       Impact factor: 47.728

7.  Identifying personal genomes by surname inference.

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Journal:  Science       Date:  2013-01-18       Impact factor: 47.728

8.  Research ethics. Research practice and participant preferences: the growing gulf.

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9.  On sharing quantitative trait GWAS results in an era of multiple-omics data and the limits of genomic privacy.

Authors:  Hae Kyung Im; Eric R Gamazon; Dan L Nicolae; Nancy J Cox
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10.  Resolving individuals contributing trace amounts of DNA to highly complex mixtures using high-density SNP genotyping microarrays.

Authors:  Nils Homer; Szabolcs Szelinger; Margot Redman; David Duggan; Waibhav Tembe; Jill Muehling; John V Pearson; Dietrich A Stephan; Stanley F Nelson; David W Craig
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  7 in total

1.  Expanding Access to Large-Scale Genomic Data While Promoting Privacy: A Game Theoretic Approach.

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Authors:  Sheri D Schully; Danielle M Carrick; Leah E Mechanic; Sudhir Srivastava; Garnet L Anderson; John A Baron; Christine D Berg; Jennifer Cullen; Eleftherios P Diamandis; V Paul Doria-Rose; Katrina A B Goddard; Susan E Hankinson; Lawrence H Kushi; Eric B Larson; Lisa M McShane; Richard L Schilsky; Steven Shak; Steven J Skates; Nicole Urban; Barnett S Kramer; Muin J Khoury; David F Ransohoff
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Review 3.  Brain tumor biobanking in the precision medicine era: building a high-quality resource for translational research in neuro-oncology.

Authors:  Quinn T Ostrom; Karen Devine; Jordonna Fulop; Yingli Wolinsky; Peter Liao; Lindsay Stetson; Marta Couce; Andrew E Sloan; Jill S Barnholtz-Sloan
Journal:  Neurooncol Pract       Date:  2016-12-30

4.  Risk of re-identification of epigenetic methylation data: a more nuanced response is needed.

Authors:  Yann Joly; Stephanie Om Dyke; Warren A Cheung; Mark A Rothstein; Tomi Pastinen
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5.  Challenges of web-based personal genomic data sharing.

Authors:  Mahsa Shabani; Pascal Borry
Journal:  Life Sci Soc Policy       Date:  2015-03-27

6.  Policy recommendations for addressing privacy challenges associated with cell-based research and interventions.

Authors:  Ubaka Ogbogu; Sarah Burningham; Adam Ollenberger; Kathryn Calder; Li Du; Khaled El Emam; Robyn Hyde-Lay; Rosario Isasi; Yann Joly; Ian Kerr; Bradley Malin; Michael McDonald; Steven Penney; Gayle Piat; Denis-Claude Roy; Jeremy Sugarman; Suzanne Vercauteren; Griet Verhenneman; Lori West; Timothy Caulfield
Journal:  BMC Med Ethics       Date:  2014-02-03       Impact factor: 2.652

7.  Thought leader perspectives on benefits and harms in precision medicine research.

Authors:  Laura M Beskow; Catherine M Hammack; Kathleen M Brelsford
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  7 in total

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