Literature DB >> 23578899

Synthetic biology: tools to design microbes for the production of chemicals and fuels.

Sang Woo Seo1, Jina Yang, Byung Eun Min, Sungho Jang, Jae Hyung Lim, Hyun Gyu Lim, Seong Cheol Kim, Se Yeon Kim, Jun Hong Jeong, Gyoo Yeol Jung.   

Abstract

The engineering of biological systems to achieve specific purposes requires design tools that function in a predictable and quantitative manner. Recent advances in the field of synthetic biology, particularly in the programmable control of gene expression at multiple levels of regulation, have increased our ability to efficiently design and optimize biological systems to perform designed tasks. Furthermore, implementation of these designs in biological systems highlights the potential of using these tools to build microbial cell factories for the production of chemicals and fuels. In this paper, we review current developments in the design of tools for controlling gene expression at transcriptional, post-transcriptional and post-translational levels, and consider potential applications of these tools.
Copyright © 2013 Elsevier Inc. All rights reserved.

Keywords:  Biochemical; Biofuel; Expression control; Metabolic engineering; Microbial cell factory; Synthetic biology

Mesh:

Substances:

Year:  2013        PMID: 23578899     DOI: 10.1016/j.biotechadv.2013.03.012

Source DB:  PubMed          Journal:  Biotechnol Adv        ISSN: 0734-9750            Impact factor:   14.227


  10 in total

Review 1.  Optimization of industrial microorganisms: recent advances in synthetic dynamic regulators.

Authors:  Byung Eun Min; Hyun Gyu Hwang; Hyun Gyu Lim; Gyoo Yeol Jung
Journal:  J Ind Microbiol Biotechnol       Date:  2016-11-10       Impact factor: 3.346

2.  Characterization of wastewater treatment plant microbial communities and the effects of carbon sources on diversity in laboratory models.

Authors:  Sangwon Lee; Jil T Geller; Tamas Torok; Cindy H Wu; Mary Singer; Francine C Reid; Daniel R Tarjan; Terry C Hazen; Adam P Arkin; Nathan J Hillson
Journal:  PLoS One       Date:  2014-08-22       Impact factor: 3.240

Review 3.  Microbial bioinformatics for food safety and production.

Authors:  Wynand Alkema; Jos Boekhorst; Michiel Wels; Sacha A F T van Hijum
Journal:  Brief Bioinform       Date:  2015-06-16       Impact factor: 11.622

4.  A simple method to control glycolytic flux for the design of an optimal cell factory.

Authors:  Jae Hyung Lim; Gyoo Yeol Jung
Journal:  Biotechnol Biofuels       Date:  2017-06-21       Impact factor: 6.040

Review 5.  Genetic tool development and systemic regulation in biosynthetic technology.

Authors:  Zhongxue Dai; Shangjie Zhang; Qiao Yang; Wenming Zhang; Xiujuan Qian; Weiliang Dong; Min Jiang; Fengxue Xin
Journal:  Biotechnol Biofuels       Date:  2018-06-01       Impact factor: 6.040

6.  Substrate-inducible and antibiotic-free high-level 4-hydroxyvaleric acid production in engineered Escherichia coli.

Authors:  Chandran Sathesh-Prabu; Rameshwar Tiwari; Sung Kuk Lee
Journal:  Front Bioeng Biotechnol       Date:  2022-08-09

7.  Modular design of metabolic network for robust production of n-butanol from galactose-glucose mixtures.

Authors:  Hyun Gyu Lim; Jae Hyung Lim; Gyoo Yeol Jung
Journal:  Biotechnol Biofuels       Date:  2015-09-04       Impact factor: 6.040

8.  Arabidopsis acyl-acyl carrier protein synthetase AAE15 with medium chain fatty acid specificity is functional in cyanobacteria.

Authors:  Danuta Kaczmarzyk; Elton P Hudson; Martin Fulda
Journal:  AMB Express       Date:  2016-01-21       Impact factor: 3.298

9.  Developing genome-reduced Pseudomonas chlororaphis strains for the production of secondary metabolites.

Authors:  Xuemei Shen; Zheng Wang; Xianqing Huang; Hongbo Hu; Wei Wang; Xuehong Zhang
Journal:  BMC Genomics       Date:  2017-09-11       Impact factor: 3.969

Review 10.  Microbial production of small peptide: pathway engineering and synthetic biology.

Authors:  Zhiyong Wu; Youran Li; Liang Zhang; Zhongyang Ding; Guiyang Shi
Journal:  Microb Biotechnol       Date:  2021-01-18       Impact factor: 5.813

  10 in total

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