Literature DB >> 23575346

Regulation of chromatin structure in the cardiovascular system.

Manuel Rosa-Garrido1, Elaheh Karbassi, Emma Monte, Thomas M Vondriska.   

Abstract

It has been appreciated for some time that cardiovascular disease involves large-scale transcriptional changes in various cell types. What has become increasingly clear only in the past few years, however, is the role of chromatin remodeling in cardiovascular phenotypes in normal physiology, as well as in development and disease. This review summarizes the state of the chromatin field in terms of distinct mechanisms to regulate chromatin structure in vivo, identifying when these modes of regulation have been demonstrated in cardiovascular tissues. We describe areas in which a better understanding of chromatin structure is leading to new insights into the fundamental biology of cardiovascular disease.

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Year:  2013        PMID: 23575346      PMCID: PMC3704339          DOI: 10.1253/circj.cj-13-0176

Source DB:  PubMed          Journal:  Circ J        ISSN: 1346-9843            Impact factor:   2.993


  109 in total

1.  Differential role of Nkx2-5 in activation of the atrial natriuretic factor gene in the developing versus failing heart.

Authors:  Sonisha A Warren; Ryota Terada; Laura E Briggs; Colleen T Cole-Jeffrey; Wei-Ming Chien; Tsugio Seki; Ellen O Weinberg; Thomas P Yang; Michael T Chin; Jörg Bungert; Hideko Kasahara
Journal:  Mol Cell Biol       Date:  2011-09-19       Impact factor: 4.272

2.  The RSC nucleosome-remodeling complex is required for Cohesin's association with chromosome arms.

Authors:  Jian Huang; Jing-Mei Hsu; Brehon C Laurent
Journal:  Mol Cell       Date:  2004-03-12       Impact factor: 17.970

3.  Acetylation by Tip60 is required for selective histone variant exchange at DNA lesions.

Authors:  Thomas Kusch; Laurence Florens; W Hayes Macdonald; Selene K Swanson; Robert L Glaser; John R Yates; Susan M Abmayr; Michael P Washburn; Jerry L Workman
Journal:  Science       Date:  2004-11-04       Impact factor: 47.728

4.  A map of the cis-regulatory sequences in the mouse genome.

Authors:  Yin Shen; Feng Yue; David F McCleary; Zhen Ye; Lee Edsall; Samantha Kuan; Ulrich Wagner; Jesse Dixon; Leonard Lee; Victor V Lobanenkov; Bing Ren
Journal:  Nature       Date:  2012-08-02       Impact factor: 49.962

5.  DamIP: using mutant DNA adenine methyltransferase to study DNA-protein interactions in vivo.

Authors:  Rui Xiao; David D Moore
Journal:  Curr Protoc Mol Biol       Date:  2011-04

6.  Both selenium deficiency and modest selenium supplementation lead to myocardial fibrosis in mice via effects on redox-methylation balance.

Authors:  Nicole Metes-Kosik; Ivan Luptak; Patricia M Dibello; Diane E Handy; Shiow-Shih Tang; Hui Zhi; Fuzhong Qin; Donald W Jacobsen; Joseph Loscalzo; Jacob Joseph
Journal:  Mol Nutr Food Res       Date:  2012-10-24       Impact factor: 5.914

7.  ATP-driven exchange of histone H2AZ variant catalyzed by SWR1 chromatin remodeling complex.

Authors:  Gaku Mizuguchi; Xuetong Shen; Joe Landry; Wei-Hua Wu; Subhojit Sen; Carl Wu
Journal:  Science       Date:  2003-11-26       Impact factor: 47.728

8.  Deep RNA sequencing reveals novel cardiac transcriptomic signatures for physiological and pathological hypertrophy.

Authors:  Hong Ki Song; Seong-Eui Hong; Taeyong Kim; Do Han Kim
Journal:  PLoS One       Date:  2012-04-16       Impact factor: 3.240

9.  Differential DNA methylation correlates with differential expression of angiogenic factors in human heart failure.

Authors:  Mehregan Movassagh; Mun-Kit Choy; Martin Goddard; Martin R Bennett; Thomas A Down; Roger S-Y Foo
Journal:  PLoS One       Date:  2010-01-13       Impact factor: 3.240

10.  The landscape of DNA repeat elements in human heart failure.

Authors:  Syed Haider; Lina Cordeddu; Emma Robinson; Mehregan Movassagh; Lee Siggens; Ana Vujic; Mun-Kit Choy; Martin Goddard; Pietro Lio; Roger Foo
Journal:  Genome Biol       Date:  2012-10-03       Impact factor: 13.583

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  6 in total

Review 1.  Genetic networks governing heart development.

Authors:  Ashley J Waardenberg; Mirana Ramialison; Romaric Bouveret; Richard P Harvey
Journal:  Cold Spring Harb Perspect Med       Date:  2014-10-03       Impact factor: 6.915

2.  Relationship of disease-associated gene expression to cardiac phenotype is buffered by genetic diversity and chromatin regulation.

Authors:  Elaheh Karbassi; Emma Monte; Douglas J Chapski; Rachel Lopez; Manuel Rosa Garrido; Joseph Kim; Nicholas Wisniewski; Christoph D Rau; Jessica J Wang; James N Weiss; Yibin Wang; Aldons J Lusis; Thomas M Vondriska
Journal:  Physiol Genomics       Date:  2016-06-10       Impact factor: 3.107

3.  Combinatorial chromatin dynamics foster accurate cardiopharyngeal fate choices.

Authors:  Claudia Racioppi; Keira A Wiechecki; Lionel Christiaen
Journal:  Elife       Date:  2019-11-20       Impact factor: 8.140

Review 4.  The epigenetic landscape related to reactive oxygen species formation in the cardiovascular system.

Authors:  Thomas Kietzmann; Andreas Petry; Antonina Shvetsova; Joachim M Gerhold; Agnes Görlach
Journal:  Br J Pharmacol       Date:  2017-05-10       Impact factor: 8.739

5.  Reciprocal Regulation of the Cardiac Epigenome by Chromatin Structural Proteins Hmgb and Ctcf: IMPLICATIONS FOR TRANSCRIPTIONAL REGULATION.

Authors:  Emma Monte; Manuel Rosa-Garrido; Elaheh Karbassi; Haodong Chen; Rachel Lopez; Christoph D Rau; Jessica Wang; Stanley F Nelson; Yong Wu; Enrico Stefani; Aldons J Lusis; Yibin Wang; Siavash K Kurdistani; Sarah Franklin; Thomas M Vondriska
Journal:  J Biol Chem       Date:  2016-05-16       Impact factor: 5.157

6.  DNA Methylation Indicates Susceptibility to Isoproterenol-Induced Cardiac Pathology and Is Associated With Chromatin States.

Authors:  Haodong Chen; Luz D Orozco; Jessica Wang; Christoph D Rau; Liudmilla Rubbi; Shuxun Ren; Yibin Wang; Matteo Pellegrini; Aldons J Lusis; Thomas M Vondriska
Journal:  Circ Res       Date:  2016-01-11       Impact factor: 17.367

  6 in total

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