Literature DB >> 23562681

Atomic force microscopy with sub-picoNewton force stability for biological applications.

Ruby May A Sullan1, Allison B Churnside, Duc M Nguyen, Matthew S Bull, Thomas T Perkins.   

Abstract

Atomic force microscopy (AFM) is widely used in the biological sciences. Despite 25 years of technical developments, two popular modes of bioAFM, imaging and single molecule force spectroscopy, remain hindered by relatively poor force precision and stability. Recently, we achieved both sub-pN force precision and stability under biologically useful conditions (in liquid at room temperature). Importantly, this sub-pN level of performance is routinely accessible using a commercial cantilever on a commercial instrument. The two critical results are that (i) force precision and stability were limited by the gold coating on the cantilevers, and (ii) smaller yet stiffer cantilevers did not lead to better force precision on time scales longer than 25 ms. These new findings complement our previous work that addressed tip-sample stability. In this review, we detail the methods needed to achieve this sub-pN force stability and demonstrate improvements in force spectroscopy and imaging when using uncoated cantilevers. With this improved cantilever performance, the widespread use of nonspecific biomolecular attachments becomes a limiting factor in high-precision studies. Thus, we conclude by briefly reviewing site-specific covalent-immobilization protocols for linking a biomolecule to the substrate and to the AFM tip. Published by Elsevier Inc.

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Year:  2013        PMID: 23562681      PMCID: PMC3669665          DOI: 10.1016/j.ymeth.2013.03.029

Source DB:  PubMed          Journal:  Methods        ISSN: 1046-2023            Impact factor:   3.608


  52 in total

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Authors:  K M Dohoney; J Gelles
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Journal:  EMBO J       Date:  2003-10-01       Impact factor: 11.598

3.  Routine and timely sub-picoNewton force stability and precision for biological applications of atomic force microscopy.

Authors:  Allison B Churnside; Ruby May A Sullan; Duc M Nguyen; Sara O Case; Matthew S Bull; Gavin M King; Thomas T Perkins
Journal:  Nano Lett       Date:  2012-06-15       Impact factor: 11.189

4.  Nanomechanical measurements of the sequence-dependent folding landscapes of single nucleic acid hairpins.

Authors:  Michael T Woodside; William M Behnke-Parks; Kevan Larizadeh; Kevin Travers; Daniel Herschlag; Steven M Block
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5.  B-S transition in short oligonucleotides.

Authors:  Julia Morfill; Ferdinand Kühner; Kerstin Blank; Robert A Lugmaier; Julia Sedlmair; Hermann E Gaub
Journal:  Biophys J       Date:  2007-06-08       Impact factor: 4.033

6.  Direct observation of active protein folding using lock-in force spectroscopy.

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Journal:  Biophys J       Date:  2007-08-17       Impact factor: 4.033

7.  Automated setpoint adjustment for biological contact mode atomic force microscopy imaging.

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Journal:  Nanotechnology       Date:  2010-01-22       Impact factor: 3.874

8.  Overstretching B-DNA: the elastic response of individual double-stranded and single-stranded DNA molecules.

Authors:  S B Smith; Y Cui; C Bustamante
Journal:  Science       Date:  1996-02-09       Impact factor: 47.728

9.  Fabrication of nanopore arrays and ultrathin silicon nitride membranes by block-copolymer-assisted lithography.

Authors:  Ana-Maria Popa; Philippe Niedermann; Harry Heinzelmann; Jeffrey A Hubbell; Raphaël Pugin
Journal:  Nanotechnology       Date:  2009-10-30       Impact factor: 3.874

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Authors: 
Journal:  Science       Date:  1999-01-29       Impact factor: 47.728

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  4 in total

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2.  Nanoimaging methods for biomedicine.

Authors:  Yuri L Lyubchenko
Journal:  Methods       Date:  2013-04-01       Impact factor: 3.608

3.  Optimizing 1-μs-Resolution Single-Molecule Force Spectroscopy on a Commercial Atomic Force Microscope.

Authors:  Devin T Edwards; Jaevyn K Faulk; Aric W Sanders; Matthew S Bull; Robert Walder; Marc-Andre LeBlanc; Marcelo C Sousa; Thomas T Perkins
Journal:  Nano Lett       Date:  2015-10-05       Impact factor: 11.189

4.  Mechanical Stability of a Small, Highly-Luminescent Engineered Protein NanoLuc.

Authors:  Yue Ding; Dimitra Apostolidou; Piotr Marszalek
Journal:  Int J Mol Sci       Date:  2020-12-23       Impact factor: 5.923

  4 in total

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