| Literature DB >> 23560041 |
Li Qian1, Kuanfeng Xu, Xinyu Xu, Rong Gu, Xuan Liu, Shan Shan, Tao Yang.
Abstract
AIMS/HYPOTHESIS: Variants of UCP2 and UCP3 genes have been reported to be associated with obesity, but the available data on the relationship are inconsistent. A meta-analysis was performed to determine whether there are any associations between the UCP2 -866G/A, Ala55Val, and UCP3 -55C/T polymorphisms and obesity susceptibility.Entities:
Mesh:
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Year: 2013 PMID: 23560041 PMCID: PMC3613358 DOI: 10.1371/journal.pone.0058939
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Characteristics of the UCP2 -866G/A polymorphism allelic and genotype distribution for obesity risk in studies included in the meta-analysis.
| Authors [ref.] | Year | Ethnicity | Study design | methods | Total/Genotypes(GG/GA/AA) | G allele frequency (%) | OR(95% CI) | ||
| Cases | Controls | Cases | Controls | ||||||
| Esterbauer H et al | 2001 | European | PCC | PCR-RFLP | 340(156/140/44) | 256(85/127/44) | 66.5 | 58.0 | 1.44(1.13–1.82) |
| Dalgaard LT et al | 2003 | European | PCC | PCR-RFLP | 749(292/322/135) | 816(299/369/148) | 60.5 | 59.3 | 1.05(0.91–1.21) |
| Mancini FP et al | 2003 | European | PCC | PCR-RFLP | 198(96/82/20) | 374(183/165/26) | 69.2 | 71.0 | 0.92(0.70–1.20) |
| Schauble N et al | 2003 | European | PCC | PCR-RFLP | 277(108/135/34) | 188(72/89/27) | 63.4 | 62.0 | 1.06(0.81–1.39) |
| Ochoa MC et al | 2007 | European | HCC | PCR-RFLP | 193(79/80/34) | 170(59/92/19) | 61.7 | 61.8 | 1.00(0.74–1.34) |
| Wang TN et al | 2007 | Asian | PCC | PCR-RFLP | 324(193/115/16) | 114(81/28/5) | 77.3 | 83.3 | 0.68(0.46–1.01) |
| Kring SI et al | 2008 | European | PCC | PCR-RFLP | 225(88/96/41) | 294(114/131/49) | 60.4 | 61.1 | 0.97(0.76–1.25) |
| Heidari J et al | 2010 | Asian | PCC | PCR-RFLP | 75(16/48/11) | 75(27/41/7) | 53.3 | 63.3 | 0.66(0.42–1.05) |
| Srivastava N et al | 2010 | Asian | HCC | PCR-RFLP | 200(73/86/41) | 240(106/113/21) | 58.0 | 67.7 | 0.66(0.50–0.87) |
| Zhou HY et al | 2011 | Asian | PCC | PCR-RFLP | 590(176/281/133) | 2227(623/1115/489) | 53.6 | 53,0 | 1.03(0.90–1.17) |
| Andersen G et al | 2012 | European | PCC | KASPar | 1547(583/754/210) | 3153(1133/1499/521) | 62.1 | 59.7 | 1.10(1.01–1.21) |
| 2455(874/1183/398) | 1567(534/799/234) | 59.7 | 59.6 | 1.01(0.92–1.11) | |||||
| Oktavianthi S et al | 2012 | Asian | PCC | PCR-RFLP | 142(38/77/27) | 136(54/63/19) | 53.9 | 62.9 | 0.69(0.49–0.97) |
| 75(23/42/10) | 250(72/133/45) | 58.7 | 55.4 | 1.14(0.79–1.65) | |||||
HCC, hospital-based case-control study; PCC, population-based case-control study; PCR-RFLP, Polymerase Chain Reaction – Restriction Fragment Length Polymorphism.
Characteristics of the UCP2 Ala55Val polymorphism allelic and genotype distribution for obesity risk in studies included in the meta-analysis.
| Authors[ref.] | Year | Ethnicity | Study design | methods | Total/Genotypes(CC/CT/TT) | C allele frequency (%) | OR(95% CI) | ||
| Cases | Controls | Cases | Controls | ||||||
| Urhammer SA etal | 1997 | European | PCC | PCR-RFLP | 144(41/67/36) | 182(56/86/40) | 50.7 | 54.4 | 0.90(0.66–1.23) |
| Kubota T et al | 1998 | Asian | PCC | PCR-RFLP | 42(15/13/14) | 218(64/97/57) | 51.2 | 51.6 | 0.98(0.62–1.57) |
| Otabe S et al | 1998 | European | HCC | PCR-RFLP | 72(ND) | 120(ND) | 72.2 | 62.3 | 1.56(1.00–2.44) |
| Xiu LL et al | 2004 | Asian | HCC | PCR-RFLP | 119(43/50/26) | 177(82/81/14) | 57.1 | 69.2 | 0.59(0.42–0.83) |
| Yang M et al | 2004 | Asian | HCC | PCR-RFLP | 99(36/45/18) | 57(19/29/9) | 59.1 | 58.8 | 1.01(0.63–1.62) |
| Wang TN et al | 2007 | Asian | PCC | PCR-RFLP | 324(211/104/9) | 114(90/24/0) | 81.2 | 89.5 | 0.51(0.32–0.81) |
| Kosuge K et al | 2008 | Asian | HCC | Taqman | 182(56/80/46) | 369(91/199/79) | 52.7 | 51.6 | 1.05(0.81–1.34) |
| Mottagui-TabarS et al | 2008 | European | PCC | DASH | 281(57/136/88) | 444(90/227/127) | 44.5 | 45.8 | 0.95(0.77–1.17) |
| Oktavianthi S et al | 2012 | Asian | PCC | PCR-RFLP | 142(54/77/11) | 136(72/49/15) | 65.1 | 71.0 | 0.76(0.53–1.09) |
| 75(31/35/9) | 250(98/107/45) | 64.7 | 60.6 | 1.19(0.81–1.74) | |||||
ND, no data; DASH, dynamic allele-specific hybridization.
Characteristics of the UCP3 -55C/T polymorphism allelic and genotype distribution for obesity risk in studies included in the meta-analysis.
| Authors[ref.] | Year | Ethnicity | Study design | methods | Total/Genotypes(CC/CT/TT) | C allele frequency (%) | OR(95% CI) | ||
| Cases | Controls | Cases | Controls | ||||||
| Schrauwen P et al | 1999 | Asian | PCC | PCR-RFLP | 37(24/10/3) | 30(23/7/0) | 78.4 | 88.3 | 0.48(0.18-1.25) |
| Dalgaard LT et al | 2001 | European | PCC | PCR-RFLP | 791(ND) | 915(ND) | 74.0 | 73.1 | 1.04(0.90-1.22) |
| Alonso A et al | 2005 | European | HCC | PCR-RFLP | 157(101/50/6) | 150(85/61/4) | 80.3 | 77.0 | 1.21(0.82-1.79) |
| Ochoa MC et al | 2007 | European | HCC | PCR-RFLP | 184(123/55/6) | 157(114/41/2) | 81.8 | 85.7 | 0.75(0.50-1.13) |
| Wang TN et al | 2007 | Asian | PCC | PCR-RFLP | 324(216/94/14) | 114(84/27/3) | 81.2 | 85.5 | 0.73(0.48-1.11) |
| Kring SI et al | 2008 | European | PCC | PCR-RFLP | 220(129/78/13) | 310(159/132/19) | 76.4 | 72.6 | 1.22(0.92-1.62) |
| Kosuge K et al | 2008 | Asian | HCC | Taqman | 181(88/80/13) | 369(172/161/36) | 70.7 | 68.4 | 1.11(0.85-1.47) |
| Mottagui-TabarS et al | 2008 | European | PCC | DASH | 286(33/124/129) | 469(40/199/230) | 33.2 | 29.7 | 1.17(0.94-1.47) |
Pooled measures for the association between the UCP2–866G/A, Ala55Val and UCP3–55C/T polymorphisms and susceptibility to obesity.
| SNPs | Inherited model | Ethnicity | Studies(cases/controls) | I2(%) | FEM | REM | ||
| OR(95%CI) | P | OR(95%CI) | P | |||||
| −866G/A | Additive (G vs. A) | overall | 12(7390/9860) | 62.0 | 1.02(0.98–1.07) | 0.340 | 0.98(0.90–1.07) | 0.097 |
| Asian | 5(1406/3042) | 69.7 | 0.90(0.81–1.00) | 0.040 | 0.81(0.65–1.01) | 0.057 | ||
| European | 7(5984/6818) | 28.0 | 1.06(1.01–1.12) | 0.031 | 1.06(0.99–1.14) | 0.097 | ||
| Dominant (GG+GA vs. AA) | overall | 12(7390/9860) | 55.7 | 1.00(0.92–1.09) | 0.746 | 0.94(0.80–1.10) | 0.455 | |
| Asian | 5(1406/3042) | 58.6 | 0.88(0.74–1.05) | 0.165 | 0.81(0.56–1.17) | 0.252 | ||
| European | 7(5984/6818) | 52.5 | 1.04(0.94–1,15) | 0.433 | 1.01(0.85–1.20) | 0.916 | ||
| Recessive (GG vs. GA + AA) | overall | 12(7390/9860) | 55.8 | 1.05(0.99–1.12) | 0.128 | 1.01(0.90–1.14) | 0.845 | |
| Asian | 5(1406/3042) | 65.3 | 0.88(0.76–1.02) | 0.098 | 0.76(0.56–1.02) | 0.067 | ||
| European | 7(5984/6818) | 14.9 | 1.11(1.02–1.18) | 0.012 | 1.11(1.01–1.21) | 0.022 | ||
| Co-dominant (GG vs. AA) | overall | 12(7390/9860) | 61.4 | 1.04(0.94–1.14) | 0.455 | 0.94(0.78–1.14) | 0.552 | |
| Asian | 5(1406/3042) | 68.9 | 0.84(0.69–1.04) | 0.108 | 0.67(0.41–1.10) | 0.115 | ||
| European | 7(5984/6818) | 44.7 | 1.10(0.99–1.23) | 0.089 | 1.08(0.91–1.29) | 0.365 | ||
| Ala55Val | Additive (C vs. T) | overall | 9(1483/2067) | 59.7 | 0.92(0.83–1.02) | 0.105 | 0.91(0.76–1.08) | 0.276 |
| Asian | 6(983/1321) | 62.4 | 0.86(0.75–0.99) | 0.03 | 0.84(0.67–1.06) | 0.145 | ||
| European | 3(497/746) | 55.5 | 1.00(0.85–1.17) | 0.994 | 1.04(0.80–1.36) | 0.755 | ||
| Dominant (CC+CT vs. TT) | overall | 8(1411/1947) | 42.8 | 0.83(0.69–1.10) | 0.057 | 0.82(0.62–1.09) | 0.169 | |
| Recessive (CC vs. CT+TT) | overall | 8(1411/1947) | 54.8 | 0.89(0.76–1.05) | 0.166 | 0.89(0.69–1.13) | 0.328 | |
| Co-dominant (CC vs. TT) | overall | 8(1411/1947) | 40.8 | 0.81(0.64–1.02) | 0.07 | 0.85(0.62–1.16) | 0.304 | |
| −55C/T | Additive (C vs. T) | overall | 8(2180/2514) | 34.4 | 1.05(0.96–1.16) | 0.26 | 1.04(0.91–1.19) | 0.54 |
| Asian | 3(542/513) | 57.1 | 0.94(0.75–1.18) | 0.57 | 0.94(0.55–1.28) | 0.42 | ||
| European | 5(1638/2001) | 17.4 | 1.08(0.97–1.20) | 0.13 | 1.08(0.96–1.23) | 0.21 | ||
| Dominant (CC+CT vs. TT) | overall | 7(1389/1599) | 41 | 1.08(0.91–1.28) | 0.37 | 1.06(0.84–1.33) | 0.62 | |
| Recessive (CC vs. CT+TT) | overall | 7(1389/1599) | 0 | 1.08(0.85–1.36) | 0.54 | 1.09(0.86–1.39) | 0.47 | |
| Co-dominant (CC vs. TT) | overall | 7(1389/1599) | 10 | 1.12(0.82–1.54) | 0.47 | 1.13(0.79–1.61) | 0.52 | |
FEM:fixed effect pooled measure; REM:randomed effect pooled measure.
Figure 1Stratified analysis pooled odds ratios for the association between the UCP2-866G/A polymorphism and susceptibility to obesity.
The area of the squares reflects the study-specific weight. The diamond shows the summary random-effects odds ratio estimate from 12 studies.
Figure 2Stratified analysis pooled odds ratios for the association between the UCP2 Ala55Val polymorphism and susceptibility to obesity by ethnicity.
The area of the squares reflects the study-specific weight. The diamond shows the summary random-effects odds ratio estimate from 9 studies.
Figure 3Stratified analysis pooled odds ratios for the association between the UCP3-55C/T polymorphism and susceptibility to obesity by ethnicity.
The area of the squares reflects the study-specific weight. The diamond shows the summary fixed-effects odds ratio estimate from 8 studies.