Literature DB >> 23542951

Blind compressive sensing dynamic MRI.

Sajan Goud Lingala1, Mathews Jacob.   

Abstract

We propose a novel blind compressive sensing (BCS) frame work to recover dynamic magnetic resonance images from undersampled measurements. This scheme models the dynamic signal as a sparse linear combination of temporal basis functions, chosen from a large dictionary. In contrast to classical compressed sensing, the BCS scheme simultaneously estimates the dictionary and the sparse coefficients from the undersampled measurements. Apart from the sparsity of the coefficients, the key difference of the BCS scheme with current low rank methods is the nonorthogonal nature of the dictionary basis functions. Since the number of degrees-of-freedom of the BCS model is smaller than that of the low-rank methods, it provides improved reconstructions at high acceleration rates. We formulate the reconstruction as a constrained optimization problem; the objective function is the linear combination of a data consistency term and sparsity promoting l1 prior of the coefficients. The Frobenius norm dictionary constraint is used to avoid scale ambiguity. We introduce a simple and efficient majorize-minimize algorithm, which decouples the original criterion into three simpler subproblems. An alternating minimization strategy is used, where we cycle through the minimization of three simpler problems. This algorithm is seen to be considerably faster than approaches that alternates between sparse coding and dictionary estimation, as well as the extension of K-SVD dictionary learning scheme. The use of the l1 penalty and Frobenius norm dictionary constraint enables the attenuation of insignificant basis functions compared to the l0 norm and column norm constraint assumed in most dictionary learning algorithms; this is especially important since the number of basis functions that can be reliably estimated is restricted by the available measurements. We also observe that the proposed scheme is more robust to local minima compared to K-SVD method, which relies on greedy sparse coding. Our phase transition experiments demonstrate that the BCS scheme provides much better recovery rates than classical Fourier-based CS schemes, while being only marginally worse than the dictionary aware setting. Since the overhead in additionally estimating the dictionary is low, this method can be very useful in dynamic magnetic resonance imaging applications, where the signal is not sparse in known dictionaries. We demonstrate the utility of the BCS scheme in accelerating contrast enhanced dynamic data. We observe superior reconstruction performance with the BCS scheme in comparison to existing low rank and compressed sensing schemes.

Entities:  

Mesh:

Year:  2013        PMID: 23542951      PMCID: PMC3902976          DOI: 10.1109/TMI.2013.2255133

Source DB:  PubMed          Journal:  IEEE Trans Med Imaging        ISSN: 0278-0062            Impact factor:   10.048


  19 in total

1.  k-t BLAST and k-t SENSE: dynamic MRI with high frame rate exploiting spatiotemporal correlations.

Authors:  Jeffrey Tsao; Peter Boesiger; Klaas P Pruessmann
Journal:  Magn Reson Med       Date:  2003-11       Impact factor: 4.668

2.  An augmented Lagrangian approach to the constrained optimization formulation of imaging inverse problems.

Authors:  Manya V Afonso; José M Bioucas-Dias; Mário A T Figueiredo
Journal:  IEEE Trans Image Process       Date:  2010-09-13       Impact factor: 10.856

3.  MR image reconstruction from highly undersampled k-space data by dictionary learning.

Authors:  Saiprasad Ravishankar; Yoram Bresler
Journal:  IEEE Trans Med Imaging       Date:  2010-11-01       Impact factor: 10.048

4.  Sparse MRI: The application of compressed sensing for rapid MR imaging.

Authors:  Michael Lustig; David Donoho; John M Pauly
Journal:  Magn Reson Med       Date:  2007-12       Impact factor: 4.668

5.  Image sequence denoising via sparse and redundant representations.

Authors:  Matan Protter; Michael Elad
Journal:  IEEE Trans Image Process       Date:  2009-01       Impact factor: 10.856

6.  k-t PCA: temporally constrained k-t BLAST reconstruction using principal component analysis.

Authors:  Henrik Pedersen; Sebastian Kozerke; Steffen Ringgaard; Kay Nehrke; Won Yong Kim
Journal:  Magn Reson Med       Date:  2009-09       Impact factor: 4.668

7.  Radial k-t FOCUSS for high-resolution cardiac cine MRI.

Authors:  Hong Jung; Jaeseok Park; Jaeheung Yoo; Jong Chul Ye
Journal:  Magn Reson Med       Date:  2010-01       Impact factor: 4.668

8.  A fast majorize-minimize algorithm for the recovery of sparse and low-rank matrices.

Authors:  Yue Hu; Sajan Goud Lingala; Mathews Jacob
Journal:  IEEE Trans Image Process       Date:  2011-08-22       Impact factor: 10.856

9.  Accelerated dynamic MRI exploiting sparsity and low-rank structure: k-t SLR.

Authors:  Sajan Goud Lingala; Yue Hu; Edward DiBella; Mathews Jacob
Journal:  IEEE Trans Med Imaging       Date:  2011-01-31       Impact factor: 10.048

10.  Image reconstruction from highly undersampled (k, t)-space data with joint partial separability and sparsity constraints.

Authors:  Bo Zhao; Justin P Haldar; Anthony G Christodoulou; Zhi-Pei Liang
Journal:  IEEE Trans Med Imaging       Date:  2012-06-08       Impact factor: 10.048

View more
  33 in total

1.  Reconstruction of dynamic image series from undersampled MRI data using data-driven model consistency condition (MOCCO).

Authors:  Julia V Velikina; Alexey A Samsonov
Journal:  Magn Reson Med       Date:  2014-11-14       Impact factor: 4.668

2.  MRI reconstruction of multi-image acquisitions using a rank regularizer with data reordering.

Authors:  Ganesh Adluru; Yaniv Gur; Liyong Chen; David Feinberg; Jeffrey Anderson; Edward V R DiBella
Journal:  Med Phys       Date:  2015-08       Impact factor: 4.071

3.  Blind Compressed Sensing Enables 3-Dimensional Dynamic Free Breathing Magnetic Resonance Imaging of Lung Volumes and Diaphragm Motion.

Authors:  Sampada Bhave; Sajan Goud Lingala; John D Newell; Scott K Nagle; Mathews Jacob
Journal:  Invest Radiol       Date:  2016-06       Impact factor: 6.016

4.  A variable splitting based algorithm for fast multi-coil blind compressed sensing MRI reconstruction.

Authors:  Sampada Bhave; Sajan Goud Lingala; Mathews Jacob
Journal:  Conf Proc IEEE Eng Med Biol Soc       Date:  2014

5.  Motion-compensated data decomposition algorithm to accelerate dynamic cardiac MRI.

Authors:  Azar Tolouee; Javad Alirezaie; Paul Babyn
Journal:  MAGMA       Date:  2017-05-31       Impact factor: 2.310

6.  Patch based reconstruction of undersampled data (PROUD) for high signal-to-noise ratio and high frame rate contrast enhanced liver imaging.

Authors:  Mitchell A Cooper; Thanh D Nguyen; Bo Xu; Martin R Prince; Michael Elad; Yi Wang; Pascal Spincemaille
Journal:  Magn Reson Med       Date:  2014-12-06       Impact factor: 4.668

7.  Accelerating chemical exchange saturation transfer MRI with parallel blind compressed sensing.

Authors:  Huajun She; Joshua S Greer; Shu Zhang; Bian Li; Jochen Keupp; Ananth J Madhuranthakam; Ivan E Dimitrov; Robert E Lenkinski; Elena Vinogradov
Journal:  Magn Reson Med       Date:  2018-08-26       Impact factor: 4.668

8.  Online Adaptive Image Reconstruction (OnAIR) Using Dictionary Models.

Authors:  Brian E Moore; Saiprasad Ravishankar; Raj Rao Nadakuditi; Jeffrey A Fessler
Journal:  IEEE Trans Comput Imaging       Date:  2020

9.  Image Reconstruction: From Sparsity to Data-adaptive Methods and Machine Learning.

Authors:  Saiprasad Ravishankar; Jong Chul Ye; Jeffrey A Fessler
Journal:  Proc IEEE Inst Electr Electron Eng       Date:  2019-09-19       Impact factor: 10.961

10.  Deformation corrected compressed sensing (DC-CS): a novel framework for accelerated dynamic MRI.

Authors:  Sajan Goud Lingala; Edward DiBella; Mathews Jacob
Journal:  IEEE Trans Med Imaging       Date:  2014-07-29       Impact factor: 10.048

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.