Literature DB >> 23542735

Looking back on the birth of DEAD-box RNA helicases.

Patrick Linder1, Frances V Fuller-Pace.   

Abstract

DEAD-box proteins represent the largest family of RNA helicases, present in all three kingdoms of life. They are involved in a variety of processes involving RNA metabolism and in some instances also in processes that use guide RNAs. Since their first descriptions in the late 1980s, the perception of their molecular activities has dramatically changed. At the time when only eight proteins with 9 conserved motifs constituted the DEAD-box protein family, it was the biochemical characterization of mammalian eIF4A that first suggested a local unwinding activity. This was confirmed in vitro using partially double stranded RNA substrates with the unexpected result of a bidirectional unwinding activity. A real change of paradigm from the classical helicase activity to localized RNA unwinding occurred with the publication of the vasa•RNA structure with a bend in the RNA substrate and the insightful work from several laboratories demonstrating local unwinding without translocation. Finally, elegant work on the exon-junction complex revealed how DEAD-box proteins can bind to RNA to serve as clamps to function as nucleation centers to form RNP complexes. This article is part of a Special Issue entitled: The Biology of RNA helicases - Modulation for life.
Copyright © 2013 Elsevier B.V. All rights reserved.

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Year:  2013        PMID: 23542735     DOI: 10.1016/j.bbagrm.2013.03.007

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  50 in total

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3.  Crystal structure of the human eIF4AIII-CWC22 complex shows how a DEAD-box protein is inhibited by a MIF4G domain.

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Journal:  Proc Natl Acad Sci U S A       Date:  2013-11-11       Impact factor: 11.205

4.  Transcriptome-wide analysis of DEAD-box RNA helicase gene family in an Antarctic psychrophilic alga Chlamydomonas sp. ICE-L.

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Journal:  Extremophiles       Date:  2015-07-16       Impact factor: 2.395

5.  Mechanism of cytoplasmic mRNA translation.

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6.  RNA helicase DDX19 stabilizes ribosomal elongation and termination complexes.

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Review 7.  Evolutionary conservation and expression of human RNA-binding proteins and their role in human genetic disease.

Authors:  Stefanie Gerstberger; Markus Hafner; Manuel Ascano; Thomas Tuschl
Journal:  Adv Exp Med Biol       Date:  2014       Impact factor: 2.622

8.  The DEAD-box RNA helicase DDX41 is a novel repressor of p21WAF1/CIP1 mRNA translation.

Authors:  Dominik Peters; Claudia Radine; Alina Reese; Wilfried Budach; Dennis Sohn; Reiner U Jänicke
Journal:  J Biol Chem       Date:  2017-03-27       Impact factor: 5.157

9.  ATP-competitive, marine derived natural products that target the DEAD box helicase, eIF4A.

Authors:  Joseph Tillotson; Magdalena Kedzior; Larissa Guimarães; Alison B Ross; Tara L Peters; Andrew J Ambrose; Cody J Schmidlin; Donna D Zhang; Letícia V Costa-Lotufo; Abimael D Rodríguez; Jonathan H Schatz; Eli Chapman
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10.  DHX33 Transcriptionally Controls Genes Involved in the Cell Cycle.

Authors:  Baolei Yuan; Xingshun Wang; Chunyan Fan; Jin You; Yuchu Liu; Jason D Weber; Hanbing Zhong; Yandong Zhang
Journal:  Mol Cell Biol       Date:  2016-11-14       Impact factor: 4.272

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