Literature DB >> 23535918

Bacterial community structure on two alpine debris-covered glaciers and biogeography of Polaromonas phylotypes.

Andrea Franzetti1, Valeria Tatangelo, Isabella Gandolfi, Valentina Bertolini, Giuseppina Bestetti, Guglielmina Diolaiuti, Carlo D'Agata, Claudia Mihalcea, Claudio Smiraglia, Roberto Ambrosini.   

Abstract

High-elevation cold environments are considered ideal places to test hypotheses about mechanisms of bacterial colonization and succession, and about bacterial biogeography. Debris-covered glaciers (glaciers whose ablation area is mainly covered by a continuous layer of rock debris fallen from the surrounding mountains) have never been investigated in this respect so far. We used the Illumina technology to analyse the V5 and V6 hypervariable regions of the bacterial 16S rRNA gene amplified from 38 samples collected in July and September 2009 at different distances from the terminus on two debris-covered glaciers (Miage and Belvedere--Italian Alps). Heterotrophic taxa-dominated communities and bacterial community structure changed according to ice ablation rate, organic carbon content of the debris and distance from the glacier terminus. Bacterial communities therefore change during downwards debris transport, and organic carbon of these recently exposed substrates is probably provided more by allochthonous deposition of organic matter than by primary production by autotrophic organisms. We also investigated whether phylotypes of the genus Polaromonas, which is ubiquitous in cold environments, do present a biogeographical distribution by analysing the sequences retrieved in this study together with others available in the literature. We found that the genetic distance among phylotypes increased with geographic distance; however, more focused analyses using discrete distance classes revealed that both sequences collected at sites <100 km and at sites 9400-13,500 km to each other were more similar than those collected at other distance classes. Evidences of biogeographic distribution of Polaromonas phylotypes were therefore contrasting.

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Year:  2013        PMID: 23535918      PMCID: PMC3721117          DOI: 10.1038/ismej.2013.48

Source DB:  PubMed          Journal:  ISME J        ISSN: 1751-7362            Impact factor:   10.302


  38 in total

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Authors:  Anita Zumsteg; Jörg Luster; Hans Göransson; Rienk H Smittenberg; Ivano Brunner; Stefano M Bernasconi; Josef Zeyer; Beat Frey
Journal:  Microb Ecol       Date:  2011-12-13       Impact factor: 4.552

2.  Bacterial diversity in a glacier foreland of the high Arctic.

Authors:  Ursel M E Schütte; Zaid Abdo; James Foster; Jacques Ravel; John Bunge; Bjørn Solheim; Larry J Forney
Journal:  Mol Ecol       Date:  2010-03       Impact factor: 6.185

3.  Seasonal variability of bacteria in fine and coarse urban air particulate matter.

Authors:  Andrea Franzetti; Isabella Gandolfi; Eleonora Gaspari; Roberto Ambrosini; Giuseppina Bestetti
Journal:  Appl Microbiol Biotechnol       Date:  2010-12-24       Impact factor: 4.813

4.  Microbial population structures in the deep marine biosphere.

Authors:  Julie A Huber; David B Mark Welch; Hilary G Morrison; Susan M Huse; Phillip R Neal; David A Butterfield; Mitchell L Sogin
Journal:  Science       Date:  2007-10-05       Impact factor: 47.728

5.  Rock weathering creates oases of life in a high Arctic desert.

Authors:  Sara Borin; Stefano Ventura; Fulvia Tambone; Francesca Mapelli; Florence Schubotz; Lorenzo Brusetti; Barbara Scaglia; Luigi P D'Acqui; Bjørn Solheim; Silvia Turicchia; Ramona Marasco; Kai-Uwe Hinrichs; Franco Baldi; Fabrizio Adani; Daniele Daffonchio
Journal:  Environ Microbiol       Date:  2009-10-16       Impact factor: 5.491

6.  Planktonic actinobacterial diversity along a salinity gradient of a river and five lakes on the Tibetan Plateau.

Authors:  Hongchen Jiang; Qiuyuan Huang; Shicai Deng; Hailiang Dong; Bingsong Yu
Journal:  Extremophiles       Date:  2010-05-20       Impact factor: 2.395

7.  Functional shifts in unvegetated, perhumid, recently-deglaciated soils do not correlate with shifts in soil bacterial community composition.

Authors:  Sarah R Sattin; Cory C Cleveland; Eran Hood; Sasha C Reed; Andrew J King; Steven K Schmidt; Michael S Robeson; Nataly Ascarrunz; Diana R Nemergut
Journal:  J Microbiol       Date:  2010-02-04       Impact factor: 3.422

8.  Microbial diversity and activity along the forefields of two receding glaciers.

Authors:  W V Sigler; J Zeyer
Journal:  Microb Ecol       Date:  2002-04-15       Impact factor: 4.552

9.  Comparison of two next-generation sequencing technologies for resolving highly complex microbiota composition using tandem variable 16S rRNA gene regions.

Authors:  Marcus J Claesson; Qiong Wang; Orla O'Sullivan; Rachel Greene-Diniz; James R Cole; R Paul Ross; Paul W O'Toole
Journal:  Nucleic Acids Res       Date:  2010-09-29       Impact factor: 16.971

10.  GenBank.

Authors:  Dennis A Benson; Ilene Karsch-Mizrachi; David J Lipman; James Ostell; Eric W Sayers
Journal:  Nucleic Acids Res       Date:  2009-11-12       Impact factor: 16.971

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  17 in total

1.  Potential sources of microbial colonizers in an initial soil ecosystem after retreat of an alpine glacier.

Authors:  Thomas Rime; Martin Hartmann; Beat Frey
Journal:  ISME J       Date:  2016-01-15       Impact factor: 10.302

2.  Diversity and Assembling Processes of Bacterial Communities in Cryoconite Holes of a Karakoram Glacier.

Authors:  Roberto Ambrosini; Federica Musitelli; Federico Navarra; Ilario Tagliaferri; Isabella Gandolfi; Giuseppina Bestetti; Christoph Mayer; Umberto Minora; Roberto Sergio Azzoni; Guglielmina Diolaiuti; Claudio Smiraglia; Andrea Franzetti
Journal:  Microb Ecol       Date:  2016-12-21       Impact factor: 4.552

3.  Light-dependent microbial metabolisms drive carbon fluxes on glacier surfaces.

Authors:  Andrea Franzetti; Ilario Tagliaferri; Isabella Gandolfi; Giuseppina Bestetti; Umberto Minora; Christoph Mayer; Roberto S Azzoni; Guglielmina Diolaiuti; Claudio Smiraglia; Roberto Ambrosini
Journal:  ISME J       Date:  2016-04-29       Impact factor: 10.302

4.  Prokaryotic Diversity and Distribution in Different Habitats of an Alpine Rock Glacier-Pond System.

Authors:  I Mania; R Gorra; N Colombo; M Freppaz; M Martin; A M Anesio
Journal:  Microb Ecol       Date:  2018-10-13       Impact factor: 4.552

5.  Characterization of the Skin Microbiota in Italian Stream Frogs (Rana italica) Infected and Uninfected by a Cutaneous Parasitic Disease.

Authors:  Ermanno Federici; Roberta Rossi; Laura Fidati; Romina Paracucchi; Silvia Scargetta; Elena Montalbani; Andrea Franzetti; Gianandrea La Porta; Anna Fagotti; Francesca Simonceli; Giovanni Cenci; Ines Di Rosa
Journal:  Microbes Environ       Date:  2015-09-15       Impact factor: 2.912

6.  Microbial community development on the surface of Hans and Werenskiold Glaciers (Svalbard, Arctic): a comparison.

Authors:  Jakub Grzesiak; Dorota Górniak; Aleksander Świątecki; Tamara Aleksandrzak-Piekarczyk; Katarzyna Szatraj; Marek K Zdanowski
Journal:  Extremophiles       Date:  2015-06-24       Impact factor: 2.395

7.  Changes of the Bacterial Abundance and Communities in Shallow Ice Cores from Dunde and Muztagata Glaciers, Western China.

Authors:  Yong Chen; Xiang-Kai Li; Jing Si; Guang-Jian Wu; Li-De Tian; Shu-Rong Xiang
Journal:  Front Microbiol       Date:  2016-11-01       Impact factor: 5.640

8.  Microbial Community Analysis of Colored Snow from an Alpine Snowfield in Northern Japan Reveals the Prevalence of Betaproteobacteria with Snow Algae.

Authors:  Mia Terashima; Kazuhiro Umezawa; Shoichi Mori; Hisaya Kojima; Manabu Fukui
Journal:  Front Microbiol       Date:  2017-08-07       Impact factor: 5.640

9.  Independent Shifts of Abundant and Rare Bacterial Populations across East Antarctica Glacial Foreland.

Authors:  Wenkai Yan; Hongmei Ma; Guitao Shi; Yuansheng Li; Bo Sun; Xiang Xiao; Yu Zhang
Journal:  Front Microbiol       Date:  2017-08-10       Impact factor: 5.640

10.  The microbiome of glaciers and ice sheets.

Authors:  Alexandre M Anesio; Stefanie Lutz; Nathan A M Chrismas; Liane G Benning
Journal:  NPJ Biofilms Microbiomes       Date:  2017-04-19       Impact factor: 7.290

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