Literature DB >> 23531693

A PHD in histone language: on the role of histone methylation in plant responses to phosphate deficiency.

Nulu Naga Prafulla Chandrika1, Kalaipandian Sundaravelpandian, Wolfgang Schmidt.   

Abstract

Post-translational modifications of core histones are important for various DNA-templated processes such as transcription and repair. We recently reported that the ALFIN LIKE 6 (AL6) gene, identified in a forward genetic screen, is critical for phosphate deficiency-induced root hair formation and several other processes associated with the regulation of cellular phosphate homeostasis. AL6 contains a Plant Homeo Domain (PHD) finger that can bind to trimethylated lysine 4 of histone H3 (H3K4me3). Homozygous mutants defective in AL6 expression form very short root hairs under phosphate-deficient conditions, presumably caused by altered expression of putative primary and secondary down-stream targets of AL6. In this Addendum, we speculate about possible roles of AL6, H3K4 trimethylation and other chromatin modifications in the adaptation of plants to low phosphate availability.

Entities:  

Keywords:  PHD finger; chromatin modificiations; histone methylation; phosphate deficiency; root hairs

Mesh:

Substances:

Year:  2013        PMID: 23531693      PMCID: PMC3908967          DOI: 10.4161/psb.24381

Source DB:  PubMed          Journal:  Plant Signal Behav        ISSN: 1559-2316


  15 in total

1.  WDR5 associates with histone H3 methylated at K4 and is essential for H3 K4 methylation and vertebrate development.

Authors:  Joanna Wysocka; Tomek Swigut; Thomas A Milne; Yali Dou; Xin Zhang; Alma L Burlingame; Robert G Roeder; Ali H Brivanlou; C David Allis
Journal:  Cell       Date:  2005-06-17       Impact factor: 41.582

2.  Histone H2B monoubiquitination functions cooperatively with FACT to regulate elongation by RNA polymerase II.

Authors:  Rushad Pavri; Bing Zhu; Guohong Li; Patrick Trojer; Subhrangsu Mandal; Ali Shilatifard; Danny Reinberg
Journal:  Cell       Date:  2006-05-19       Impact factor: 41.582

Review 3.  Histone H3 Lys 4 methylation: caught in a bind?

Authors:  Robert J Sims; Danny Reinberg
Journal:  Genes Dev       Date:  2006-10-15       Impact factor: 11.361

4.  Molecular mechanism of histone H3K4me3 recognition by plant homeodomain of ING2.

Authors:  Pedro V Peña; Foteini Davrazou; Xiaobing Shi; Kay L Walter; Vladislav V Verkhusha; Or Gozani; Rui Zhao; Tatiana G Kutateladze
Journal:  Nature       Date:  2006-05-21       Impact factor: 49.962

5.  ALFIN-LIKE 6 is involved in root hair elongation during phosphate deficiency in Arabidopsis.

Authors:  Nulu Naga Prafulla Chandrika; Kalaipandian Sundaravelpandian; Su-May Yu; Wolfgang Schmidt
Journal:  New Phytol       Date:  2013-02-25       Impact factor: 10.151

6.  Proteome-wide analysis in Saccharomyces cerevisiae identifies several PHD fingers as novel direct and selective binding modules of histone H3 methylated at either lysine 4 or lysine 36.

Authors:  Xiaobing Shi; Ioulia Kachirskaia; Kay L Walter; Jen-Hao A Kuo; Aimee Lake; Foteini Davrazou; Steve M Chan; David G E Martin; Ian M Fingerman; Scott D Briggs; LeAnn Howe; Paul J Utz; Tatiana G Kutateladze; Alexey A Lugovskoy; Mark T Bedford; Or Gozani
Journal:  J Biol Chem       Date:  2006-12-01       Impact factor: 5.157

Review 7.  The PHD finger: implications for chromatin-mediated transcriptional regulation.

Authors:  R Aasland; T J Gibson; A F Stewart
Journal:  Trends Biochem Sci       Date:  1995-02       Impact factor: 13.807

Review 8.  The PHD finger, a nuclear protein-interaction domain.

Authors:  Mariann Bienz
Journal:  Trends Biochem Sci       Date:  2005-11-16       Impact factor: 13.807

9.  Dynamic acetylation of all lysine 4-methylated histone H3 in the mouse nucleus: analysis at c-fos and c-jun.

Authors:  Catherine A Hazzalin; Louis C Mahadevan
Journal:  PLoS Biol       Date:  2005-11-08       Impact factor: 8.029

10.  Dynamic acetylation of lysine-4-trimethylated histone H3 and H3 variant biology in a simple multicellular eukaryote.

Authors:  Duen-Wei Hsu; Jonathan R Chubb; Tetsuya Muramoto; Catherine J Pears; Louis C Mahadevan
Journal:  Nucleic Acids Res       Date:  2012-05-16       Impact factor: 16.971

View more
  5 in total

Review 1.  PHDs govern plant development.

Authors:  Alfonso Mouriz; Leticia López-González; Jose A Jarillo; Manuel Piñeiro
Journal:  Plant Signal Behav       Date:  2015

2.  Evolution and conservation of polycomb repressive complex 1 core components and putative associated factors in the green lineage.

Authors:  Yong Huang; Ling Jiang; Bo-Yu Liu; Cheng-Fang Tan; Dong-Hong Chen; Wen-Hui Shen; Ying Ruan
Journal:  BMC Genomics       Date:  2019-06-28       Impact factor: 3.969

3.  Ectopic expression of Medicago truncatula homeodomain finger protein, MtPHD6, enhances drought tolerance in Arabidopsis.

Authors:  Wenli Quan; Xun Liu; Lihua Wang; Mingzhu Yin; Li Yang; Zhulong Chan
Journal:  BMC Genomics       Date:  2019-12-16       Impact factor: 3.969

Review 4.  Minireview: Chromatin-based regulation of iron homeostasis in plants.

Authors:  Justin Su; Zhujun Yao; Yixuan Wu; Joohyun Lee; Jeeyon Jeong
Journal:  Front Plant Sci       Date:  2022-09-16       Impact factor: 6.627

Review 5.  Chromatin-Based Regulation of Plant Root Development.

Authors:  Dong-Hong Chen; Yong Huang; Changhua Jiang; Jin-Ping Si
Journal:  Front Plant Sci       Date:  2018-10-16       Impact factor: 5.753

  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.