Literature DB >> 23506373

Is local selection so widespread in river organisms? Fractal geometry of river networks leads to high bias in outlier detection.

Yoan Fourcade1, Audrey Chaput-Bardy, Jean Secondi, Cyril Fleurant, Christophe Lemaire.   

Abstract

Identifying local adaptation is crucial in conservation biology to define ecotypes and establish management guidelines. Local adaptation is often inferred from the detection of loci showing a high differentiation between populations, the so-called FST outliers. Methods of detection of loci under selection are reputed to be robust in most spatial population models. However, using simulations we showed that FST outlier tests provided a high rate of false-positives (up to 60%) in fractal environments such as river networks. Surprisingly, the number of sampled demes was correlated with parameters of population genetic structure, such as the variance of FST s, and hence strongly influenced the rate of outliers. This unappreciated property of river networks therefore needs to be accounted for in genetic studies on adaptation and conservation of river organisms.
© 2013 Blackwell Publishing Ltd.

Mesh:

Year:  2013        PMID: 23506373     DOI: 10.1111/mec.12158

Source DB:  PubMed          Journal:  Mol Ecol        ISSN: 0962-1083            Impact factor:   6.185


  13 in total

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