Literature DB >> 23503809

Powder crystallography of pharmaceutical materials by combined crystal structure prediction and solid-state 1H NMR spectroscopy.

Maria Baias1, Cory M Widdifield, Jean-Nicolas Dumez, Hugh P G Thompson, Timothy G Cooper, Elodie Salager, Sirena Bassil, Robin S Stein, Anne Lesage, Graeme M Day, Lyndon Emsley.   

Abstract

A protocol for the ab initio crystal structure determination of powdered solids at natural isotopic abundance by combining solid-state NMR spectroscopy, crystal structure prediction, and DFT chemical shift calculations was evaluated to determine the crystal structures of four small drug molecules: cocaine, flutamide, flufenamic acid, and theophylline. For cocaine, flutamide and flufenamic acid, we find that the assigned (1)H isotropic chemical shifts provide sufficient discrimination to determine the correct structures from a set of predicted structures using the root-mean-square deviation (rmsd) between experimentally determined and calculated chemical shifts. In most cases unassigned shifts could not be used to determine the structures. This method requires no prior knowledge of the crystal structure, and was used to determine the correct crystal structure to within an atomic rmsd of less than 0.12 Å with respect to the known reference structure. For theophylline, the NMR spectra are too simple to allow for unambiguous structure selection.

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Year:  2013        PMID: 23503809     DOI: 10.1039/c3cp41095a

Source DB:  PubMed          Journal:  Phys Chem Chem Phys        ISSN: 1463-9076            Impact factor:   3.676


  29 in total

1.  Benchmark fragment-based (1)H, (13)C, (15)N and (17)O chemical shift predictions in molecular crystals.

Authors:  Joshua D Hartman; Ryan A Kudla; Graeme M Day; Leonard J Mueller; Gregory J O Beran
Journal:  Phys Chem Chem Phys       Date:  2016-07-19       Impact factor: 3.676

2.  Water Enables Efficient CO2 Capture from Natural Gas Flue Emissions in an Oxidation-Resistant Diamine-Appended Metal-Organic Framework.

Authors:  Rebecca L Siegelman; Phillip J Milner; Alexander C Forse; Jung-Hoon Lee; Kristen A Colwell; Jeffrey B Neaton; Jeffrey A Reimer; Simon C Weston; Jeffrey R Long
Journal:  J Am Chem Soc       Date:  2019-08-08       Impact factor: 15.419

3.  New thermoresistant polymorph from CO2 recrystallization of minocycline hydrochloride.

Authors:  Miguel A Rodrigues; João M Tiago; Luis Padrela; Henrique A Matos; Teresa G Nunes; Lídia Pinheiro; António J Almeida; Edmundo Gomes de Azevedo
Journal:  Pharm Res       Date:  2014-05-20       Impact factor: 4.200

4.  Exploiting the Synergy of Powder X-ray Diffraction and Solid-State NMR Spectroscopy in Structure Determination of Organic Molecular Solids.

Authors:  Dmytro V Dudenko; P Andrew Williams; Colan E Hughes; Oleg N Antzutkin; Sitaram P Velaga; Steven P Brown; Kenneth D M Harris
Journal:  J Phys Chem C Nanomater Interfaces       Date:  2013-05-03       Impact factor: 4.126

5.  Convergence Properties of Crystal Structure Prediction by Quasi-Random Sampling.

Authors:  David H Case; Josh E Campbell; Peter J Bygrave; Graeme M Day
Journal:  J Chem Theory Comput       Date:  2016-01-13       Impact factor: 6.006

6.  Polymorphs of Theophylline Characterized by DNP Enhanced Solid-State NMR.

Authors:  Arthur C Pinon; Aaron J Rossini; Cory M Widdifield; David Gajan; Lyndon Emsley
Journal:  Mol Pharm       Date:  2015-10-02       Impact factor: 4.939

7.  An optimized intermolecular force field for hydrogen-bonded organic molecular crystals using atomic multipole electrostatics.

Authors:  Edward O Pyzer-Knapp; Hugh P G Thompson; Graeme M Day
Journal:  Acta Crystallogr B Struct Sci Cryst Eng Mater       Date:  2016-07-16

8.  Elucidating CO2 Chemisorption in Diamine-Appended Metal-Organic Frameworks.

Authors:  Alexander C Forse; Phillip J Milner; Jung-Hoon Lee; Halle N Redfearn; Julia Oktawiec; Rebecca L Siegelman; Jeffrey D Martell; Bhavish Dinakar; Leo B Zasada; Miguel I Gonzalez; Jeffrey B Neaton; Jeffrey R Long; Jeffrey A Reimer
Journal:  J Am Chem Soc       Date:  2018-12-13       Impact factor: 15.419

9.  Enhanced NMR Discrimination of Pharmaceutically Relevant Molecular Crystal Forms through Fragment-Based Ab Initio Chemical Shift Predictions.

Authors:  Joshua D Hartman; Graeme M Day; Gregory J O Beran
Journal:  Cryst Growth Des       Date:  2016-10-04       Impact factor: 4.076

10.  Enantioselective Recognition of Ammonium Carbamates in a Chiral Metal-Organic Framework.

Authors:  Jeffrey D Martell; Leo B Zasada; Alexander C Forse; Rebecca L Siegelman; Miguel I Gonzalez; Julia Oktawiec; Tomče Runčevski; Jiawei Xu; Monika Srebro-Hooper; Phillip J Milner; Kristen A Colwell; Jochen Autschbach; Jeffrey A Reimer; Jeffrey R Long
Journal:  J Am Chem Soc       Date:  2017-10-25       Impact factor: 15.419

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