Literature DB >> 23498919

Development of cyclic peptomer inhibitors targeting the polo-box domain of polo-like kinase 1.

Ravichandran N Murugan1, Jung-Eun Park, Dan Lim, Mija Ahn, Chaejoon Cheong, Taeho Kwon, Ky-Youb Nam, Sun Ho Choi, Bo Yeon Kim, Do-Young Yoon, Michael B Yaffe, Dae-Yeul Yu, Kyung S Lee, Jeong Kyu Bang.   

Abstract

The polo-box domain (PBD) of polo-like kinase 1 (Plk1) is essentially required for the function of Plk1 in cell proliferation. The availability of the phosphopeptide-binding pocket on PBD provides a unique opportunity to develop novel protein-protein interaction inhibitors. Recent identification of a minimal 5-residue-long phosphopeptide, PLHSpT, as a Plk1 PBD-specific ligand has led to the development of several peptide-based inhibitors, but none of them is cyclic peptide. Through the combination of single-peptoid mimics and thio-ether bridged cyclization, we successfully demonstrated for the first time two cyclic peptomers, PL-116 and PL-120, dramatically improved the binding affinity without losing mono-specificity against Plk1 PBD in comparison with the linear parental peptide, PLHSpT. These cyclic peptomers could serve as promising templates for future drug designs to inhibit Plk1 PBD.
Copyright © 2013 Elsevier Ltd. All rights reserved.

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Year:  2013        PMID: 23498919      PMCID: PMC7561269          DOI: 10.1016/j.bmc.2013.02.020

Source DB:  PubMed          Journal:  Bioorg Med Chem        ISSN: 0968-0896            Impact factor:   3.641


  17 in total

1.  Investigation of unanticipated alkylation at the N(π) position of a histidyl residue under Mitsunobu conditions and synthesis of orthogonally protected histidine analogues.

Authors:  Wenjian Qian; Fa Liu; Terrence R Burke
Journal:  J Org Chem       Date:  2011-10-03       Impact factor: 4.354

2.  Relationship of stereochemical and skeletal diversity of small molecules to cellular measurement space.

Authors:  Young-kwon Kim; Midori A Arai; Takayoshi Arai; Julia O Lamenzo; Elton F Dean; Nick Patterson; Paul A Clemons; Stuart L Schreiber
Journal:  J Am Chem Soc       Date:  2004-11-17       Impact factor: 15.419

3.  KinMutBase: a registry of disease-causing mutations in protein kinase domains.

Authors:  Csaba Ortutay; Jouni Väliaho; Kaj Stenberg; Mauno Vihinen
Journal:  Hum Mutat       Date:  2005-05       Impact factor: 4.878

Review 4.  Polo-box domain: a versatile mediator of polo-like kinase function.

Authors:  Jung-Eun Park; Nak-Kyun Soung; Yoshikazu Johmura; Young H Kang; Chenzhong Liao; Kyung H Lee; Chi Hoon Park; Marc C Nicklaus; Kyung S Lee
Journal:  Cell Mol Life Sci       Date:  2010-02-11       Impact factor: 9.261

5.  Self-regulated Plk1 recruitment to kinetochores by the Plk1-PBIP1 interaction is critical for proper chromosome segregation.

Authors:  Young H Kang; Jung-Eun Park; Li-Rong Yu; Nak-Kyun Soung; Sang-Moon Yun; Jeong K Bang; Yeon-Sun Seong; Hongtao Yu; Susan Garfield; Timothy D Veenstra; Kyung S Lee
Journal:  Mol Cell       Date:  2006-11-03       Impact factor: 17.970

6.  Structural and functional analyses of minimal phosphopeptides targeting the polo-box domain of polo-like kinase 1.

Authors:  Sang-Moon Yun; Tinoush Moulaei; Dan Lim; Jeong K Bang; Jung-Eun Park; Shilpa R Shenoy; Fa Liu; Young H Kang; Chenzhong Liao; Nak-Kyun Soung; Sunhee Lee; Do-Young Yoon; Yoongho Lim; Dong-Hee Lee; Akira Otaka; Ettore Appella; James B McMahon; Marc C Nicklaus; Terrence R Burke; Michael B Yaffe; Alexander Wlodawer; Kyung S Lee
Journal:  Nat Struct Mol Biol       Date:  2009-07-13       Impact factor: 15.369

7.  Non-proteinogenic amino acids in the pThr-2 position of a pentamer peptide that confer high binding affinity for the polo box domain (PBD) of polo-like kinase 1 (Plk1).

Authors:  Wen-Jian Qian; Jung-Eun Park; Kyung S Lee; Terrence R Burke
Journal:  Bioorg Med Chem Lett       Date:  2012-10-27       Impact factor: 2.823

8.  The Sak polo-box comprises a structural domain sufficient for mitotic subcellular localization.

Authors:  Genie C Leung; John W Hudson; Anna Kozarova; Alan Davidson; James W Dennis; Frank Sicheri
Journal:  Nat Struct Biol       Date:  2002-10

9.  Peptoid-Peptide hybrid ligands targeting the polo box domain of polo-like kinase 1.

Authors:  Fa Liu; Jung-Eun Park; Wen-Jian Qian; Dan Lim; Andrej Scharow; Thorsten Berg; Michael B Yaffe; Kyung S Lee; Terrence R Burke
Journal:  Chembiochem       Date:  2012-05-08       Impact factor: 3.164

10.  Serendipitous alkylation of a Plk1 ligand uncovers a new binding channel.

Authors:  Fa Liu; Jung-Eun Park; Wen-Jian Qian; Dan Lim; Martin Gräber; Thorsten Berg; Michael B Yaffe; Kyung S Lee; Terrence R Burke
Journal:  Nat Chem Biol       Date:  2011-07-17       Impact factor: 15.040

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  13 in total

Review 1.  Recent Advances and New Strategies in Targeting Plk1 for Anticancer Therapy.

Authors:  Kyung S Lee; Terrence R Burke; Jung-Eun Park; Jeong K Bang; Eunhye Lee
Journal:  Trends Pharmacol Sci       Date:  2015-10-17       Impact factor: 14.819

2.  Structural analysis of the polo-box domain of human Polo-like kinase 2.

Authors:  Ju Hee Kim; Bonsu Ku; Kyung S Lee; Seung Jun Kim
Journal:  Proteins       Date:  2015-04-28

Review 3.  Targeting kinase signaling pathways with constrained peptide scaffolds.

Authors:  Laura E Hanold; Melody D Fulton; Eileen J Kennedy
Journal:  Pharmacol Ther       Date:  2017-02-07       Impact factor: 12.310

4.  Histidine N(τ)-cyclized macrocycles as a new genre of polo-like kinase 1 polo-box domain-binding inhibitors.

Authors:  David Hymel; Robert A Grant; Kohei Tsuji; Michael B Yaffe; Terrence R Burke
Journal:  Bioorg Med Chem Lett       Date:  2018-08-19       Impact factor: 2.823

5.  Application of oxime-diversification to optimize ligand interactions within a cryptic pocket of the polo-like kinase 1 polo-box domain.

Authors:  Xue Zhi Zhao; David Hymel; Terrence R Burke
Journal:  Bioorg Med Chem Lett       Date:  2016-09-02       Impact factor: 2.823

6.  Neighbor-directed histidine N (τ)-alkylation: A route to imidazolium-containing phosphopeptide macrocycles.

Authors:  Wen-Jian Qian; Jung-Eun Park; Robert Grant; Christopher C Lai; James A Kelley; Michael B Yaffe; Kyung S Lee; Terrence R Burke
Journal:  Biopolymers       Date:  2015-11       Impact factor: 2.505

7.  Design and synthesis of a cell-permeable, drug-like small molecule inhibitor targeting the polo-box domain of polo-like kinase 1.

Authors:  Ganipisetti Srinivasrao; Jung-Eun Park; Sungmin Kim; Mija Ahn; Chaejoon Cheong; Ky-Youb Nam; Pethaiah Gunasekaran; Eunha Hwang; Nam-Hyung Kim; Song Yub Shin; Kyung S Lee; Eunkyung Ryu; Jeong Kyu Bang
Journal:  PLoS One       Date:  2014-09-11       Impact factor: 3.240

8.  Dynamic and multi-pharmacophore modeling for designing polo-box domain inhibitors.

Authors:  Sugunadevi Sakkiah; Silvia Senese; Qianfan Yang; Keun Woo Lee; Jorge Z Torres
Journal:  PLoS One       Date:  2014-07-18       Impact factor: 3.240

Review 9.  Putting a bit into the polo-box domain of polo-like kinase 1.

Authors:  Jung-Eun Park; Tae-Sung Kim; Lingjun Meng; Jeong K Bang; Bo Y Kim; Kyung S Lee
Journal:  J Anal Sci Technol       Date:  2015-10-14

10.  Structural basis for recognition of Emi2 by Polo-like kinase 1 and development of peptidomimetics blocking oocyte maturation and fertilization.

Authors:  Jia-Lin Jia; Young-Hyun Han; Hak-Cheol Kim; Mija Ahn; Jeong-Woo Kwon; Yibo Luo; Pethaiah Gunasekaran; Soo-Jae Lee; Kyung S Lee; Jeong Kyu Bang; Nam-Hyung Kim; Suk Namgoong
Journal:  Sci Rep       Date:  2015-10-13       Impact factor: 4.379

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