Literature DB >> 23494128

Biological evolution of replicator systems: towards a quantitative approach.

Osmel Martin1, J E Horvath.   

Abstract

The aim of this work is to study the features of a simple replicator chemical model of the relation between kinetic stability and entropy production under the action of external perturbations. We quantitatively explore the different paths leading to evolution in a toy model where two independent replicators compete for the same substrate. To do that, the same scenario described originally by Pross (J Phys Org Chem 17:312-316, 2004) is revised and new criteria to define the kinetic stability are proposed. Our results suggest that fast replicator populations are continually favored by the effects of strong stochastic environmental fluctuations capable to determine the global population, the former assumed to be the only acting evolution force. We demonstrate that the process is continually driven by strong perturbations only, and that population crashes may be useful proxies for these catastrophic environmental fluctuations. As expected, such behavior is particularly enhanced under very large scale perturbations, suggesting a likely dynamical footprint in the recovery patterns of new species after mass extinction events in the Earth's geological past. Furthermore, the hypothesis that natural selection always favors the faster processes may give theoretical support to different studies that claim the applicability of maximum principles like the Maximum Metabolic Flux (MMF) or Maximum Entropy Productions Principle (MEPP), seen as the main goal of biological evolution.

Mesh:

Year:  2013        PMID: 23494128     DOI: 10.1007/s11084-013-9327-4

Source DB:  PubMed          Journal:  Orig Life Evol Biosph        ISSN: 0169-6149            Impact factor:   1.950


  10 in total

1.  Photosynthetic models with maximum entropy production in irreversible charge transfer steps.

Authors:  Davor Juretić; Pasko Zupanović
Journal:  Comput Biol Chem       Date:  2003-12       Impact factor: 2.877

2.  Maximum entropy production in environmental and ecological systems.

Authors:  Axel Kleidon; Yadvinder Malhi; Peter M Cox
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2010-05-12       Impact factor: 6.237

Review 3.  On the emergence of biological complexity: life as a kinetic state of matter.

Authors:  Addy Pross
Journal:  Orig Life Evol Biosph       Date:  2005-04       Impact factor: 1.950

4.  Non-equilibrium thermodynamics, maximum entropy production and Earth-system evolution.

Authors:  Axel Kleidon
Journal:  Philos Trans A Math Phys Eng Sci       Date:  2010-01-13       Impact factor: 4.226

5.  Evolution of enzyme function and the development of catalytic efficiency.

Authors:  W J Albery; J R Knowles
Journal:  Biochemistry       Date:  1976-12-14       Impact factor: 3.162

6.  Exceptional fossil preservation and the cambrian explosion.

Authors:  Nicholas J Butterfield
Journal:  Integr Comp Biol       Date:  2003-02       Impact factor: 3.326

7.  Enzyme kinetics and the maximum entropy production principle.

Authors:  Andrej Dobovišek; Paško Zupanović; Milan Brumen; Zeljana Bonačić-Lošić; Domagoj Kuić; Davor Juretić
Journal:  Biophys Chem       Date:  2011-01-04       Impact factor: 2.352

8.  Photodissociation of protonated leucine-enkephalin in the VUV range of 8-40 eV.

Authors:  S Bari; O Gonzalez-Magaña; G Reitsma; J Werner; S Schippers; R Hoekstra; T Schlathölter
Journal:  J Chem Phys       Date:  2011-01-14       Impact factor: 3.488

Review 9.  The Chicxulub asteroid impact and mass extinction at the Cretaceous-Paleogene boundary.

Authors:  Peter Schulte; Laia Alegret; Ignacio Arenillas; José A Arz; Penny J Barton; Paul R Bown; Timothy J Bralower; Gail L Christeson; Philippe Claeys; Charles S Cockell; Gareth S Collins; Alexander Deutsch; Tamara J Goldin; Kazuhisa Goto; José M Grajales-Nishimura; Richard A F Grieve; Sean P S Gulick; Kirk R Johnson; Wolfgang Kiessling; Christian Koeberl; David A Kring; Kenneth G MacLeod; Takafumi Matsui; Jay Melosh; Alessandro Montanari; Joanna V Morgan; Clive R Neal; Douglas J Nichols; Richard D Norris; Elisabetta Pierazzo; Greg Ravizza; Mario Rebolledo-Vieyra; Wolf Uwe Reimold; Eric Robin; Tobias Salge; Robert P Speijer; Arthur R Sweet; Jaime Urrutia-Fucugauchi; Vivi Vajda; Michael T Whalen; Pi S Willumsen
Journal:  Science       Date:  2010-03-05       Impact factor: 47.728

10.  Evolutionary optimization of the catalytic effectiveness of an enzyme.

Authors:  J J Burbaum; R T Raines; W J Albery; J R Knowles
Journal:  Biochemistry       Date:  1989-11-28       Impact factor: 3.162

  10 in total
  4 in total

1.  A necessary condition for coexistence of autocatalytic replicators in a prebiotic environment.

Authors:  Andres F Hernandez; Martha A Grover
Journal:  Life (Basel)       Date:  2013-07-24

2.  How and why kinetics, thermodynamics, and chemistry induce the logic of biological evolution.

Authors:  Addy Pross; Robert Pascal
Journal:  Beilstein J Org Chem       Date:  2017-04-07       Impact factor: 2.883

3.  Promise and reality in the expanding field of network interaction analysis: metabolic networks.

Authors:  Susanna Bazzani
Journal:  Bioinform Biol Insights       Date:  2014-04-16

Review 4.  Towards an evolutionary theory of the origin of life based on kinetics and thermodynamics.

Authors:  Robert Pascal; Addy Pross; John D Sutherland
Journal:  Open Biol       Date:  2013-11-06       Impact factor: 6.411

  4 in total

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