Literature DB >> 21339036

Enzyme kinetics and the maximum entropy production principle.

Andrej Dobovišek1, Paško Zupanović, Milan Brumen, Zeljana Bonačić-Lošić, Domagoj Kuić, Davor Juretić.   

Abstract

A general proof is derived that entropy production can be maximized with respect to rate constants in any enzymatic transition. This result is used to test the assumption that biological evolution of enzyme is accompanied with an increase of entropy production in its internal transitions and that such increase can serve to quantify the progress of enzyme evolution. The state of maximum entropy production would correspond to fully evolved enzyme. As an example the internal transition ES↔EP in a generalized reversible Michaelis-Menten three state scheme is analyzed. A good agreement is found among experimentally determined values of the forward rate constant in internal transitions ES→EP for three types of β-Lactamase enzymes and their optimal values predicted by the maximum entropy production principle, which agrees with earlier observations that β-Lactamase enzymes are nearly fully evolved. The optimization of rate constants as the consequence of basic physical principle, which is the subject of this paper, is a completely different concept from a) net metabolic flux maximization or b) entropy production minimization (in the static head state), both also proposed to be tightly connected to biological evolution.
Copyright © 2011 Elsevier B.V. All rights reserved.

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Year:  2011        PMID: 21339036     DOI: 10.1016/j.bpc.2010.12.009

Source DB:  PubMed          Journal:  Biophys Chem        ISSN: 0301-4622            Impact factor:   2.352


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