Literature DB >> 23478572

Transcriptional regulation by the Set7 lysine methyltransferase.

Samuel T Keating1, Assam El-Osta2.   

Abstract

Posttranslational histone modifications define chromatin structure and function. In recent years, a number of studies have characterized many of the enzymatic activities and diverse regulatory components required for monomethylation of histone H3 lysine 4 (H3K4me1) and the expression of specific genes. The challenge now is to understand how this specific chemical modification is written and the Set7 methyltransferase has emerged as a key regulatory enzyme mediating methylation of lysine residues of histone and non-histone proteins. In this review, we comprehensively explore the regulatory proteins modified by Set7 and highlight mechanisms of specific co-recruitment of the enzyme to activating promoters. With a focus on signaling and transcriptional control in disease we discuss recent experimental data emphasizing specific components of diverse regulatory complexes that mediate chromatin modification and reinterpretation of Set7-mediated gene expression.

Entities:  

Keywords:  Set7; Set9; chromatin; epigenetics; gene expression; histone modification; lysine methylation; metabolic memory; p65

Mesh:

Substances:

Year:  2013        PMID: 23478572      PMCID: PMC3674045          DOI: 10.4161/epi.24234

Source DB:  PubMed          Journal:  Epigenetics        ISSN: 1559-2294            Impact factor:   4.528


  102 in total

1.  The methyl-CpG-binding protein MeCP2 links DNA methylation to histone methylation.

Authors:  Francois Fuks; Paul J Hurd; Daniel Wolf; Xinsheng Nan; Adrian P Bird; Tony Kouzarides
Journal:  J Biol Chem       Date:  2002-11-09       Impact factor: 5.157

2.  Distinguishing hyperglycemic changes by Set7 in vascular endothelial cells.

Authors:  Jun Okabe; Christian Orlowski; Aneta Balcerczyk; Chris Tikellis; Merlin C Thomas; Mark E Cooper; Assam El-Osta
Journal:  Circ Res       Date:  2012-03-08       Impact factor: 17.367

3.  Histone chaperones regulate histone exchange during transcription.

Authors:  Hye-Jin Kim; Ja-Hwan Seol; Jeung-Whan Han; Hong-Duk Youn; Eun-Jung Cho
Journal:  EMBO J       Date:  2007-10-04       Impact factor: 11.598

4.  Distinct and predictive chromatin signatures of transcriptional promoters and enhancers in the human genome.

Authors:  Nathaniel D Heintzman; Rhona K Stuart; Gary Hon; Yutao Fu; Christina W Ching; R David Hawkins; Leah O Barrera; Sara Van Calcar; Chunxu Qu; Keith A Ching; Wei Wang; Zhiping Weng; Roland D Green; Gregory E Crawford; Bing Ren
Journal:  Nat Genet       Date:  2007-02-04       Impact factor: 38.330

5.  Enhancer-associated H3K4 monomethylation by Trithorax-related, the Drosophila homolog of mammalian Mll3/Mll4.

Authors:  Hans-Martin Herz; Man Mohan; Alexander S Garruss; Kaiwei Liang; Yoh-Hei Takahashi; Kristen Mickey; Olaf Voets; C Peter Verrijzer; Ali Shilatifard
Journal:  Genes Dev       Date:  2012-11-19       Impact factor: 11.361

Review 6.  Targeting protein lysine methylation and demethylation in cancers.

Authors:  Yunlong He; Ilia Korboukh; Jian Jin; Jing Huang
Journal:  Acta Biochim Biophys Sin (Shanghai)       Date:  2012-01       Impact factor: 3.848

7.  Histone H3 lysine 4 methylation patterns in higher eukaryotic genes.

Authors:  Robert Schneider; Andrew J Bannister; Fiona A Myers; Alan W Thorne; Colyn Crane-Robinson; Tony Kouzarides
Journal:  Nat Cell Biol       Date:  2003-12-07       Impact factor: 28.824

8.  Multiple lysine methylation of PCAF by Set9 methyltransferase.

Authors:  Toshihiro Masatsugu; Ken Yamamoto
Journal:  Biochem Biophys Res Commun       Date:  2009-02-07       Impact factor: 3.575

9.  The lysine demethylase LSD1 (KDM1) is required for maintenance of global DNA methylation.

Authors:  Jing Wang; Sarah Hevi; Julia K Kurash; Hong Lei; Frédérique Gay; Jeffrey Bajko; Hui Su; Weitao Sun; Hua Chang; Guoliang Xu; François Gaudet; En Li; Taiping Chen
Journal:  Nat Genet       Date:  2008-12-21       Impact factor: 38.330

Review 10.  E2F and cell cycle control: a double-edged sword.

Authors:  Craig Stevens; Nicholas B La Thangue
Journal:  Arch Biochem Biophys       Date:  2003-04-15       Impact factor: 4.013

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  33 in total

Review 1.  Post-transcriptional gene silencing, transcriptional gene silencing and human immunodeficiency virus.

Authors:  Catalina Méndez; Chantelle L Ahlenstiel; Anthony D Kelleher
Journal:  World J Virol       Date:  2015-08-12

2.  Functional regulation of hypoxia inducible factor-1α by SET9 lysine methyltransferase.

Authors:  Qiong Liu; Hao Geng; Changhui Xue; Tomasz M Beer; David Z Qian
Journal:  Biochim Biophys Acta       Date:  2015-01-28

3.  Deep sequencing reveals novel Set7 networks.

Authors:  Samuel T Keating; Mark Ziemann; Jun Okabe; Abdul Waheed Khan; Aneta Balcerczyk; Assam El-Osta
Journal:  Cell Mol Life Sci       Date:  2014-05-30       Impact factor: 9.261

4.  SETD7 in cardiomyocyte differentiation and cardiac function.

Authors:  Tupa Basuroy; Ivana L de la Serna
Journal:  Stem Cell Investig       Date:  2019-09-09

Review 5.  The epigenetic landscape related to reactive oxygen species formation in the cardiovascular system.

Authors:  Thomas Kietzmann; Andreas Petry; Antonina Shvetsova; Joachim M Gerhold; Agnes Görlach
Journal:  Br J Pharmacol       Date:  2017-05-10       Impact factor: 8.739

Review 6.  Epigenetic Changes in Diabetes and Cardiovascular Risk.

Authors:  Samuel T Keating; Jorge Plutzky; Assam El-Osta
Journal:  Circ Res       Date:  2016-05-27       Impact factor: 17.367

7.  A cytosine-thymine (CT)-rich haplotype in intron 4 of SNCA confers risk for Lewy body pathology in Alzheimer's disease and affects SNCA expression.

Authors:  Michael W Lutz; Robert Saul; Colton Linnertz; Omolara-Chinue Glenn; Allen D Roses; Ornit Chiba-Falek
Journal:  Alzheimers Dement       Date:  2015-06-13       Impact factor: 21.566

8.  (R)-PFI-2 is a potent and selective inhibitor of SETD7 methyltransferase activity in cells.

Authors:  Dalia Barsyte-Lovejoy; Fengling Li; Menno J Oudhoff; John H Tatlock; Aiping Dong; Hong Zeng; Hong Wu; Spencer A Freeman; Matthieu Schapira; Guillermo A Senisterra; Ekaterina Kuznetsova; Richard Marcellus; Abdellah Allali-Hassani; Steven Kennedy; Jean-Philippe Lambert; Amber L Couzens; Ahmed Aman; Anne-Claude Gingras; Rima Al-Awar; Paul V Fish; Brian S Gerstenberger; Lee Roberts; Caroline L Benn; Rachel L Grimley; Mitchell J S Braam; Fabio M V Rossi; Marius Sudol; Peter J Brown; Mark E Bunnage; Dafydd R Owen; Colby Zaph; Masoud Vedadi; Cheryl H Arrowsmith
Journal:  Proc Natl Acad Sci U S A       Date:  2014-08-18       Impact factor: 11.205

Review 9.  Epigenetics and precision medicine in cardiovascular patients: from basic concepts to the clinical arena.

Authors:  Sarah Costantino; Peter Libby; Raj Kishore; Jean-Claude Tardif; Assam El-Osta; Francesco Paneni
Journal:  Eur Heart J       Date:  2018-12-14       Impact factor: 29.983

10.  Epigenetic modifications of Keap1 regulate its interaction with the protective factor Nrf2 in the development of diabetic retinopathy.

Authors:  Manish Mishra; Qing Zhong; Renu A Kowluru
Journal:  Invest Ophthalmol Vis Sci       Date:  2014-10-09       Impact factor: 4.799

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