Literature DB >> 23476551

(E)-(2,5-Difluoro-benz-yl)[(2-eth-oxy-naphthalen-1-yl)methyl-idene]amine.

Merve Pekdemir1, Samil Işık, Mustafa Macit, Ayşen Alaman Ağar, Mustafa Serkan Soylu.   

Abstract

In the title mol-ecule, C20H17F2NO, which adopts an E conformation with respect to the imine C=N double bond, the mean planes of the naphthalene ring system and the difluoro-phenyl ring form a dihedral angle of 85.82 (7)°. An intra-molecular C-H⋯N hydrogen bond occurs. In the crystal, weak C-H⋯F hydrogen bonds link the mol-ecules into zigzag chains along [010].

Entities:  

Year:  2013        PMID: 23476551      PMCID: PMC3588433          DOI: 10.1107/S1600536813001967

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For structural studies of Schiff bases by our group, see: Gül et al. (2007 ▶); Kantar et al. (2012 ▶); Kargılı et al. (2012 ▶); Pekdemir et al. (2012 ▶); Vesek et al. (2012 ▶). For classification of hydrogen-bonding patterns, see: Bernstein et al. (1995 ▶).

Experimental

Crystal data

C20H17F2NO M = 325.35 Monoclinic, a = 12.5963 (8) Å b = 14.3010 (8) Å c = 9.8693 (8) Å β = 108.672 (8)° V = 1684.3 (2) Å3 Z = 4 Mo Kα radiation μ = 0.09 mm−1 T = 293 K 0.30 × 0.25 × 0.25 mm

Data collection

Oxford Diffraction SuperNova Eos diffractometer Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2007 ▶) T min = 0.703, T max = 1.000 5942 measured reflections 2958 independent reflections 1997 reflections with I > 2σ(I) R int = 0.018

Refinement

R[F 2 > 2σ(F 2)] = 0.058 wR(F 2) = 0.151 S = 1.06 2958 reflections 217 parameters H-atom parameters constrained Δρmax = 0.18 e Å−3 Δρmin = −0.18 e Å−3 Data collection: CrysAlis PRO (Oxford Diffraction, 2007 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▶); software used to prepare material for publication: WinGX (Farrugia, 2012 ▶). Click here for additional data file. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536813001967/cv5376sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813001967/cv5376Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536813001967/cv5376Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C20H17F2NOF(000) = 680
Mr = 325.35Dx = 1.283 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 1869 reflections
a = 12.5963 (8) Åθ = 3.3–29.3°
b = 14.3010 (8) ŵ = 0.09 mm1
c = 9.8693 (8) ÅT = 293 K
β = 108.672 (8)°Block, yellow
V = 1684.3 (2) Å30.30 × 0.25 × 0.25 mm
Z = 4
Oxford Diffraction SuperNova Eos diffractometer2958 independent reflections
Radiation source: fine-focus sealed tube1997 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.018
Detector resolution: 16.0454 pixels mm-1θmax = 25.0°, θmin = 3.3°
ω scansh = −13→14
Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2007)k = −17→17
Tmin = 0.703, Tmax = 1.000l = −11→11
5942 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.058Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.151H-atom parameters constrained
S = 1.06w = 1/[σ2(Fo2) + (0.0491P)2 + 0.5882P] where P = (Fo2 + 2Fc2)/3
2958 reflections(Δ/σ)max < 0.001
217 parametersΔρmax = 0.18 e Å3
0 restraintsΔρmin = −0.18 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.05443 (18)0.09513 (16)0.9269 (2)0.0475 (6)
C2−0.04096 (19)0.08982 (16)0.8003 (3)0.0505 (6)
C3−0.0486 (2)0.02790 (19)0.6849 (3)0.0648 (7)
H30.0107−0.01210.69000.078*
C4−0.1420 (3)0.0264 (2)0.5666 (3)0.0792 (9)
H4−0.1445−0.01400.49180.095*
C5−0.2335 (2)0.0840 (2)0.5559 (3)0.0802 (9)
H5−0.29670.08160.47500.096*
C6−0.2300 (2)0.1434 (2)0.6633 (3)0.0690 (8)
H6−0.29170.18120.65610.083*
C7−0.1346 (2)0.14949 (18)0.7868 (3)0.0558 (6)
C8−0.1289 (2)0.2129 (2)0.8967 (3)0.0669 (7)
H8−0.18970.25200.88790.080*
C9−0.0383 (2)0.21936 (19)1.0152 (3)0.0657 (7)
H9−0.03690.26281.08590.079*
C100.0540 (2)0.15986 (17)1.0311 (3)0.0529 (6)
C110.1491 (2)0.2230 (2)1.2652 (3)0.0759 (8)
H11A0.08840.20491.30040.091*
H11B0.13860.28791.23530.091*
C120.2588 (3)0.2110 (2)1.3797 (3)0.0938 (10)
H12A0.26060.24911.46040.141*
H12B0.31820.22961.34410.141*
H12C0.26850.14661.40840.141*
C130.15149 (19)0.03193 (16)0.9571 (3)0.0515 (6)
H130.19010.01851.05240.062*
C140.2785 (2)−0.07076 (19)0.9136 (3)0.0690 (8)
H14A0.2510−0.13380.88750.083*
H14B0.3083−0.06761.01710.083*
C150.37095 (19)−0.05036 (18)0.8517 (3)0.0578 (7)
C160.4542 (2)−0.1146 (2)0.8634 (3)0.0749 (8)
C170.5395 (3)−0.1034 (3)0.8079 (4)0.0963 (11)
H170.5931−0.14990.81790.116*
C180.5443 (3)−0.0221 (3)0.7371 (4)0.1016 (12)
H180.6008−0.01240.69670.122*
C190.4647 (3)0.0442 (3)0.7271 (4)0.0894 (10)
C200.3785 (2)0.0321 (2)0.7833 (3)0.0738 (8)
H200.32590.07920.77500.089*
F10.45086 (15)−0.19516 (13)0.9363 (3)0.1126 (7)
F20.46988 (19)0.12570 (19)0.6602 (3)0.1524 (10)
N10.18605 (17)−0.00533 (16)0.8631 (2)0.0647 (6)
O10.14961 (14)0.16450 (12)1.14686 (18)0.0653 (5)
U11U22U33U12U13U23
C10.0479 (13)0.0437 (13)0.0606 (14)0.0002 (11)0.0309 (11)0.0012 (11)
C20.0504 (13)0.0479 (13)0.0615 (14)−0.0059 (11)0.0294 (11)0.0034 (12)
C30.0580 (15)0.0659 (17)0.0731 (17)−0.0086 (13)0.0248 (13)−0.0090 (14)
C40.0711 (19)0.086 (2)0.079 (2)−0.0214 (17)0.0224 (16)−0.0187 (17)
C50.0602 (18)0.094 (2)0.080 (2)−0.0175 (17)0.0126 (15)0.0027 (19)
C60.0533 (15)0.0746 (18)0.0803 (19)−0.0004 (14)0.0233 (14)0.0203 (17)
C70.0538 (14)0.0550 (15)0.0662 (15)0.0011 (12)0.0299 (12)0.0122 (13)
C80.0624 (16)0.0677 (18)0.0804 (19)0.0171 (14)0.0367 (15)0.0094 (15)
C90.0726 (18)0.0666 (17)0.0673 (17)0.0152 (15)0.0356 (15)−0.0071 (14)
C100.0554 (14)0.0545 (15)0.0566 (14)0.0043 (12)0.0289 (12)0.0005 (12)
C110.083 (2)0.080 (2)0.0684 (18)0.0049 (16)0.0296 (15)−0.0219 (16)
C120.091 (2)0.105 (3)0.079 (2)0.006 (2)0.0167 (17)−0.0266 (19)
C130.0515 (13)0.0468 (14)0.0621 (14)−0.0025 (11)0.0265 (11)−0.0008 (12)
C140.0623 (16)0.0550 (16)0.098 (2)0.0051 (13)0.0371 (15)−0.0117 (15)
C150.0460 (13)0.0582 (15)0.0671 (16)−0.0007 (12)0.0152 (11)−0.0197 (13)
C160.0596 (17)0.0640 (18)0.106 (2)0.0023 (15)0.0332 (16)−0.0129 (17)
C170.0589 (19)0.105 (3)0.135 (3)0.0102 (19)0.044 (2)−0.017 (2)
C180.062 (2)0.142 (4)0.112 (3)−0.005 (2)0.0430 (19)−0.001 (3)
C190.067 (2)0.103 (3)0.096 (2)−0.0109 (19)0.0223 (17)0.017 (2)
C200.0589 (16)0.076 (2)0.0832 (19)0.0036 (15)0.0179 (15)−0.0035 (16)
F10.0883 (13)0.0712 (12)0.192 (2)0.0199 (10)0.0639 (14)0.0089 (13)
F20.1138 (17)0.161 (2)0.186 (2)−0.0072 (16)0.0539 (17)0.078 (2)
N10.0534 (12)0.0723 (15)0.0744 (14)0.0099 (11)0.0288 (11)−0.0132 (12)
O10.0654 (11)0.0716 (12)0.0626 (11)0.0083 (9)0.0257 (9)−0.0139 (9)
C1—C101.385 (3)C11—H11B0.9700
C1—C21.432 (3)C12—H12A0.9600
C1—C131.472 (3)C12—H12B0.9600
C2—C31.421 (3)C12—H12C0.9600
C2—C71.427 (3)C13—N11.262 (3)
C3—C41.366 (4)C13—H130.9300
C3—H30.9300C14—N11.452 (3)
C4—C51.394 (4)C14—C151.507 (3)
C4—H40.9300C14—H14A0.9700
C5—C61.348 (4)C14—H14B0.9700
C5—H50.9300C15—C161.371 (3)
C6—C71.414 (3)C15—C201.377 (4)
C6—H60.9300C16—C171.363 (4)
C7—C81.398 (4)C16—F11.366 (3)
C8—C91.351 (4)C17—C181.368 (5)
C8—H80.9300C17—H170.9300
C9—C101.408 (3)C18—C191.361 (5)
C9—H90.9300C18—H180.9300
C10—O11.371 (3)C19—F21.352 (4)
C11—O11.438 (3)C19—C201.379 (4)
C11—C121.489 (4)C20—H200.9300
C11—H11A0.9700
C10—C1—C2118.8 (2)C11—C12—H12A109.5
C10—C1—C13117.4 (2)C11—C12—H12B109.5
C2—C1—C13123.7 (2)H12A—C12—H12B109.5
C3—C2—C7117.1 (2)C11—C12—H12C109.5
C3—C2—C1123.7 (2)H12A—C12—H12C109.5
C7—C2—C1119.2 (2)H12B—C12—H12C109.5
C4—C3—C2120.9 (3)N1—C13—C1124.7 (2)
C4—C3—H3119.5N1—C13—H13117.6
C2—C3—H3119.5C1—C13—H13117.6
C3—C4—C5121.3 (3)N1—C14—C15112.0 (2)
C3—C4—H4119.3N1—C14—H14A109.2
C5—C4—H4119.3C15—C14—H14A109.2
C6—C5—C4119.7 (3)N1—C14—H14B109.2
C6—C5—H5120.2C15—C14—H14B109.2
C4—C5—H5120.2H14A—C14—H14B107.9
C5—C6—C7121.4 (3)C16—C15—C20116.4 (3)
C5—C6—H6119.3C16—C15—C14120.4 (3)
C7—C6—H6119.3C20—C15—C14123.3 (2)
C8—C7—C6121.8 (2)C17—C16—F1118.2 (3)
C8—C7—C2118.7 (2)C17—C16—C15124.6 (3)
C6—C7—C2119.6 (2)F1—C16—C15117.3 (3)
C9—C8—C7122.4 (2)C16—C17—C18118.4 (3)
C9—C8—H8118.8C16—C17—H17120.8
C7—C8—H8118.8C18—C17—H17120.8
C8—C9—C10119.6 (2)C19—C18—C17118.5 (3)
C8—C9—H9120.2C19—C18—H18120.8
C10—C9—H9120.2C17—C18—H18120.8
O1—C10—C1116.1 (2)F2—C19—C18119.1 (3)
O1—C10—C9122.5 (2)F2—C19—C20118.2 (3)
C1—C10—C9121.4 (2)C18—C19—C20122.7 (3)
O1—C11—C12107.7 (2)C15—C20—C19119.5 (3)
O1—C11—H11A110.2C15—C20—H20120.3
C12—C11—H11A110.2C19—C20—H20120.3
O1—C11—H11B110.2C13—N1—C14116.6 (2)
C12—C11—H11B110.2C10—O1—C11118.26 (19)
H11A—C11—H11B108.5
C10—C1—C2—C3178.3 (2)C8—C9—C10—C10.6 (4)
C13—C1—C2—C3−5.1 (3)C10—C1—C13—N1−153.0 (2)
C10—C1—C2—C7−1.6 (3)C2—C1—C13—N130.4 (3)
C13—C1—C2—C7175.0 (2)N1—C14—C15—C16−166.9 (2)
C7—C2—C3—C40.1 (4)N1—C14—C15—C2014.0 (4)
C1—C2—C3—C4−179.8 (2)C20—C15—C16—C17−2.6 (4)
C2—C3—C4—C5−1.1 (4)C14—C15—C16—C17178.3 (3)
C3—C4—C5—C60.7 (5)C20—C15—C16—F1177.2 (2)
C4—C5—C6—C70.8 (4)C14—C15—C16—F1−1.9 (4)
C5—C6—C7—C8178.0 (3)F1—C16—C17—C18−178.8 (3)
C5—C6—C7—C2−1.8 (4)C15—C16—C17—C181.0 (5)
C3—C2—C7—C8−178.5 (2)C16—C17—C18—C190.9 (5)
C1—C2—C7—C81.4 (3)C17—C18—C19—F2178.6 (3)
C3—C2—C7—C61.3 (3)C17—C18—C19—C20−1.1 (5)
C1—C2—C7—C6−178.8 (2)C16—C15—C20—C192.2 (4)
C6—C7—C8—C9179.9 (3)C14—C15—C20—C19−178.7 (3)
C2—C7—C8—C9−0.3 (4)F2—C19—C20—C15179.8 (3)
C7—C8—C9—C10−0.8 (4)C18—C19—C20—C15−0.5 (5)
C2—C1—C10—O1−177.18 (19)C1—C13—N1—C14−175.9 (2)
C13—C1—C10—O16.1 (3)C15—C14—N1—C13−130.8 (2)
C2—C1—C10—C90.6 (3)C1—C10—O1—C11−173.3 (2)
C13—C1—C10—C9−176.2 (2)C9—C10—O1—C119.0 (3)
C8—C9—C10—O1178.2 (2)C12—C11—O1—C10176.3 (2)
D—H···AD—HH···AD···AD—H···A
C3—H3···N10.932.322.955 (3)125
C6—H6···F1i0.932.613.505 (4)162
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
C3—H3⋯N10.932.322.955 (3)125
C6—H6⋯F1i 0.932.613.505 (4)162

Symmetry code: (i) .

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2.  5-Diethyl-amino-2-[(E)-(2,4-dimeth-oxy-phen-yl)imino-meth-yl]phenol.

Authors:  Esen Nur Kantar; Yavuz Köysal; Sümeyye Gümüş; Erbil Ağar; Mustafa Serkan Soylu
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3.  (E)-3-Chloro-N-[(2-eth-oxy-naphthalen-1-yl)methyl-idene]aniline.

Authors:  Hilal Vesek; Canan Kazak; Ayşen Alaman Ağar; Mustafa Macit; Mustafa Serkan Soylu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-07-21

4.  (E)-N-[(2-Eth-oxy-naphthalen-1-yl)methyl-idene]-2-ethyl-aniline.

Authors:  Hakan Kargılı; Mustafa Macit; Gökhan Alpaslan; Canan Kazak; Ahmet Erdönmez
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-10-20

5.  2-{(E)-[(3-Iodo-4-methyl-phen-yl)imino]-meth-yl}-4-(trifluoro-meth-oxy)phenol.

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  5 in total

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