| Literature DB >> 23476407 |
Thomas Gelbrich1, Doris E Braun, Ulrich J Griesser.
Abstract
In the stable polymorph of the title compound, C17H19NO3 [systematic name: (5α,6α)-7,8-didehydro-4,5-ep-oxy-17-methyl-morphinan-3,6-diol], the mol-ecular conformation is in agreement with the characteristics of previously reported morphine forms. The molecule displays the typical T-shape and its piperidine ring adopts a slightly distorted chair conformation. Inter-molecular O-H⋯O hydrogen bonds link the mol-ecules into helical chains parallel to the b axis. Intra-molecular O-H⋯O hydrogen bonds are also observed.Entities:
Year: 2012 PMID: 23476407 PMCID: PMC3588323 DOI: 10.1107/S1600536812048945
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C17H19NO3 | |
| Orthorhombic, | Cu |
| Hall symbol: P 2ac 2ab | Cell parameters from 1360 reflections |
| θ = 3.2–68.2° | |
| µ = 0.78 mm−1 | |
| Plate, colourless | |
| 0.15 × 0.10 × 0.03 mm |
| Oxford Diffraction Xcalibur (Ruby, Gemini ultra) diffractometer | 1408 independent reflections |
| Radiation source: Enhance (Mo) X-ray Source | 977 reflections with |
| Graphite monochromator | |
| Detector resolution: 10.3575 pixels mm-1 | θmax = 68.2°, θmin = 4.7° |
| ω scans | |
| Absorption correction: multi-scan ( | |
| 13009 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max < 0.001 | |
| 1408 reflections | Δρmax = 0.27 e Å−3 |
| 192 parameters | Δρmin = −0.26 e Å−3 |
| 0 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0043 (4) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.0998 (5) | 0.6564 (3) | 0.7856 (3) | 0.0520 (12) | |
| H1 | 0.0431 | 0.7103 | 0.7705 | 0.062* | |
| O2 | 0.3165 (5) | 0.4742 (3) | 0.7958 (3) | 0.0466 (11) | |
| O3 | 0.1429 (6) | 0.2969 (3) | 0.7838 (3) | 0.0546 (12) | |
| H3 | 0.1096 | 0.3587 | 0.7941 | 0.066* | |
| N1 | 0.8422 (6) | 0.4378 (4) | 0.5555 (4) | 0.0492 (14) | |
| C1 | 0.3549 (8) | 0.6662 (5) | 0.5563 (5) | 0.0458 (15) | |
| H1A | 0.3611 | 0.7068 | 0.4984 | 0.055* | |
| C2 | 0.2382 (8) | 0.6935 (5) | 0.6290 (5) | 0.0466 (16) | |
| H2 | 0.1665 | 0.7534 | 0.6198 | 0.056* | |
| C3 | 0.2223 (7) | 0.6362 (5) | 0.7147 (5) | 0.0429 (15) | |
| C4 | 0.3281 (7) | 0.5499 (4) | 0.7238 (5) | 0.0408 (14) | |
| C5 | 0.2959 (8) | 0.2985 (5) | 0.7233 (5) | 0.0494 (17) | |
| H5 | 0.3554 | 0.2293 | 0.7320 | 0.059* | |
| C6 | 0.4208 (7) | 0.3836 (5) | 0.7615 (5) | 0.0462 (16) | |
| H6 | 0.4902 | 0.3548 | 0.8168 | 0.055* | |
| C7 | 0.2554 (9) | 0.3091 (5) | 0.6180 (5) | 0.0499 (17) | |
| H7 | 0.1398 | 0.2980 | 0.5961 | 0.060* | |
| C8 | 0.3781 (9) | 0.3338 (5) | 0.5537 (5) | 0.0506 (17) | |
| H8 | 0.3524 | 0.3340 | 0.4861 | 0.061* | |
| C9 | 0.6652 (8) | 0.4267 (5) | 0.5160 (5) | 0.0450 (15) | |
| H9 | 0.6748 | 0.3841 | 0.4551 | 0.054* | |
| C10 | 0.5732 (8) | 0.5321 (5) | 0.4878 (5) | 0.0491 (17) | |
| H10A | 0.6630 | 0.5838 | 0.4686 | 0.059* | |
| H10B | 0.4984 | 0.5194 | 0.4304 | 0.059* | |
| C11 | 0.4634 (7) | 0.5792 (5) | 0.5682 (4) | 0.0410 (14) | |
| C12 | 0.4530 (7) | 0.5257 (5) | 0.6546 (4) | 0.0386 (14) | |
| C13 | 0.5465 (8) | 0.4258 (5) | 0.6810 (4) | 0.0415 (15) | |
| C14 | 0.5584 (8) | 0.3617 (5) | 0.5888 (5) | 0.0466 (16) | |
| H14 | 0.6227 | 0.2953 | 0.6033 | 0.056* | |
| C15 | 0.7290 (7) | 0.4477 (5) | 0.7212 (5) | 0.0443 (15) | |
| H15A | 0.7199 | 0.4948 | 0.7783 | 0.053* | |
| H15B | 0.7818 | 0.3809 | 0.7432 | 0.053* | |
| C16 | 0.8453 (8) | 0.4978 (5) | 0.6457 (5) | 0.0521 (17) | |
| H16A | 0.8056 | 0.5704 | 0.6329 | 0.062* | |
| H16B | 0.9657 | 0.5012 | 0.6708 | 0.062* | |
| C17 | 0.9652 (8) | 0.4788 (6) | 0.4841 (5) | 0.060 (2) | |
| H17A | 0.9335 | 0.5510 | 0.4672 | 0.090* | |
| H17B | 0.9621 | 0.4350 | 0.4254 | 0.090* | |
| H17C | 1.0826 | 0.4778 | 0.5117 | 0.090* |
| O1 | 0.040 (2) | 0.053 (2) | 0.063 (3) | 0.012 (2) | 0.008 (2) | 0.002 (2) |
| O2 | 0.031 (2) | 0.048 (2) | 0.060 (3) | 0.0019 (19) | 0.004 (2) | 0.000 (2) |
| O3 | 0.040 (2) | 0.050 (2) | 0.074 (3) | −0.006 (2) | 0.014 (3) | −0.002 (2) |
| N1 | 0.026 (2) | 0.063 (3) | 0.059 (3) | 0.001 (3) | 0.005 (2) | 0.003 (3) |
| C1 | 0.040 (3) | 0.043 (3) | 0.055 (4) | 0.003 (3) | 0.002 (3) | 0.006 (3) |
| C2 | 0.035 (3) | 0.044 (3) | 0.061 (5) | 0.008 (3) | −0.004 (3) | 0.000 (3) |
| C3 | 0.027 (3) | 0.047 (3) | 0.055 (4) | 0.003 (3) | 0.003 (3) | −0.003 (3) |
| C4 | 0.025 (3) | 0.046 (3) | 0.051 (4) | 0.000 (3) | 0.001 (3) | 0.000 (3) |
| C5 | 0.034 (3) | 0.048 (4) | 0.066 (5) | −0.006 (3) | 0.009 (3) | −0.001 (3) |
| C6 | 0.030 (3) | 0.048 (4) | 0.061 (4) | 0.000 (3) | −0.001 (3) | 0.003 (3) |
| C7 | 0.039 (3) | 0.047 (4) | 0.064 (5) | −0.005 (3) | 0.006 (3) | −0.005 (3) |
| C8 | 0.044 (3) | 0.052 (4) | 0.056 (4) | −0.005 (3) | 0.003 (3) | −0.008 (3) |
| C9 | 0.037 (3) | 0.048 (4) | 0.050 (4) | 0.004 (3) | 0.003 (3) | −0.003 (3) |
| C10 | 0.040 (3) | 0.058 (4) | 0.050 (4) | 0.008 (3) | 0.007 (3) | 0.006 (3) |
| C11 | 0.030 (3) | 0.047 (3) | 0.045 (4) | 0.004 (3) | 0.003 (3) | −0.006 (3) |
| C12 | 0.024 (3) | 0.044 (3) | 0.048 (4) | 0.002 (3) | −0.003 (3) | 0.001 (3) |
| C13 | 0.030 (3) | 0.046 (3) | 0.048 (4) | 0.000 (3) | −0.002 (3) | 0.000 (3) |
| C14 | 0.038 (3) | 0.038 (3) | 0.065 (5) | −0.001 (3) | −0.001 (3) | 0.002 (3) |
| C15 | 0.032 (3) | 0.051 (4) | 0.050 (4) | 0.001 (3) | −0.005 (3) | 0.000 (3) |
| C16 | 0.028 (3) | 0.064 (4) | 0.064 (4) | −0.003 (3) | 0.000 (3) | 0.000 (4) |
| C17 | 0.033 (3) | 0.080 (5) | 0.066 (5) | 0.000 (4) | 0.008 (3) | 0.008 (4) |
| O1—C3 | 1.380 (7) | C7—H7 | 0.9500 |
| O1—H1 | 0.8400 | C8—C14 | 1.512 (9) |
| O2—C4 | 1.385 (7) | C8—H8 | 0.9500 |
| O2—C6 | 1.483 (7) | C9—C14 | 1.538 (9) |
| O3—C5 | 1.442 (8) | C9—C10 | 1.566 (9) |
| O3—H3 | 0.8400 | C9—H9 | 1.0000 |
| N1—C16 | 1.456 (8) | C10—C11 | 1.516 (8) |
| N1—C17 | 1.460 (8) | C10—H10A | 0.9900 |
| N1—C9 | 1.474 (8) | C10—H10B | 0.9900 |
| C1—C2 | 1.387 (9) | C11—C12 | 1.371 (8) |
| C1—C11 | 1.397 (8) | C12—C13 | 1.507 (8) |
| C1—H1A | 0.9500 | C13—C14 | 1.511 (9) |
| C2—C3 | 1.390 (9) | C13—C15 | 1.535 (8) |
| C2—H2 | 0.9500 | C14—H14 | 1.0000 |
| C3—C4 | 1.374 (8) | C15—C16 | 1.512 (8) |
| C4—C12 | 1.387 (8) | C15—H15A | 0.9900 |
| C5—C7 | 1.486 (9) | C15—H15B | 0.9900 |
| C5—C6 | 1.542 (8) | C16—H16A | 0.9900 |
| C5—H5 | 1.0000 | C16—H16B | 0.9900 |
| C6—C13 | 1.563 (9) | C17—H17A | 0.9800 |
| C6—H6 | 1.0000 | C17—H17B | 0.9800 |
| C7—C8 | 1.331 (9) | C17—H17C | 0.9800 |
| C3—O1—H1 | 109.5 | C11—C10—C9 | 114.3 (5) |
| C4—O2—C6 | 106.2 (4) | C11—C10—H10A | 108.7 |
| C5—O3—H3 | 109.5 | C9—C10—H10A | 108.7 |
| C16—N1—C17 | 112.0 (5) | C11—C10—H10B | 108.7 |
| C16—N1—C9 | 112.2 (5) | C9—C10—H10B | 108.7 |
| C17—N1—C9 | 112.7 (5) | H10A—C10—H10B | 107.6 |
| C2—C1—C11 | 120.1 (6) | C12—C11—C1 | 117.4 (6) |
| C2—C1—H1A | 119.9 | C12—C11—C10 | 117.9 (5) |
| C11—C1—H1A | 119.9 | C1—C11—C10 | 124.2 (6) |
| C1—C2—C3 | 122.3 (6) | C11—C12—C4 | 121.6 (5) |
| C1—C2—H2 | 118.8 | C11—C12—C13 | 126.9 (5) |
| C3—C2—H2 | 118.8 | C4—C12—C13 | 110.7 (5) |
| C4—C3—O1 | 119.3 (6) | C12—C13—C14 | 106.5 (5) |
| C4—C3—C2 | 116.4 (6) | C12—C13—C15 | 111.7 (5) |
| O1—C3—C2 | 124.1 (5) | C14—C13—C15 | 110.1 (5) |
| C3—C4—O2 | 125.7 (5) | C12—C13—C6 | 99.5 (5) |
| C3—C4—C12 | 121.7 (6) | C14—C13—C6 | 116.4 (5) |
| O2—C4—C12 | 112.4 (5) | C15—C13—C6 | 112.0 (5) |
| O3—C5—C7 | 113.0 (5) | C13—C14—C8 | 109.8 (5) |
| O3—C5—C6 | 108.9 (5) | C13—C14—C9 | 106.7 (5) |
| C7—C5—C6 | 113.5 (5) | C8—C14—C9 | 114.2 (6) |
| O3—C5—H5 | 107.0 | C13—C14—H14 | 108.7 |
| C7—C5—H5 | 107.0 | C8—C14—H14 | 108.7 |
| C6—C5—H5 | 107.0 | C9—C14—H14 | 108.7 |
| O2—C6—C5 | 108.5 (5) | C16—C15—C13 | 111.9 (5) |
| O2—C6—C13 | 107.1 (5) | C16—C15—H15A | 109.2 |
| C5—C6—C13 | 112.8 (5) | C13—C15—H15A | 109.2 |
| O2—C6—H6 | 109.5 | C16—C15—H15B | 109.2 |
| C5—C6—H6 | 109.5 | C13—C15—H15B | 109.2 |
| C13—C6—H6 | 109.5 | H15A—C15—H15B | 107.9 |
| C8—C7—C5 | 121.3 (6) | N1—C16—C15 | 110.7 (5) |
| C8—C7—H7 | 119.4 | N1—C16—H16A | 109.5 |
| C5—C7—H7 | 119.4 | C15—C16—H16A | 109.5 |
| C7—C8—C14 | 119.7 (6) | N1—C16—H16B | 109.5 |
| C7—C8—H8 | 120.1 | C15—C16—H16B | 109.5 |
| C14—C8—H8 | 120.1 | H16A—C16—H16B | 108.1 |
| N1—C9—C14 | 107.8 (5) | N1—C17—H17A | 109.5 |
| N1—C9—C10 | 115.3 (5) | N1—C17—H17B | 109.5 |
| C14—C9—C10 | 112.4 (5) | H17A—C17—H17B | 109.5 |
| N1—C9—H9 | 107.0 | N1—C17—H17C | 109.5 |
| C14—C9—H9 | 107.0 | H17A—C17—H17C | 109.5 |
| C10—C9—H9 | 107.0 | H17B—C17—H17C | 109.5 |
| H··· | ||||
| O1—H1···O3i | 0.84 | 1.96 | 2.757 (6) | 159 |
| O3—H3···O2 | 0.84 | 2.17 | 2.629 (6) | 114 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| O1—H1⋯O3i | 0.84 | 1.96 | 2.757 (6) | 159 |
| O3—H3⋯O2 | 0.84 | 2.17 | 2.629 (6) | 114 |
Symmetry code: (i) .