| Literature DB >> 23476371 |
Bagher Eftekhari-Sis1, Sahar Mohajer, Maryam Zirak, Sakineh Mozaffarnia, Orhan Büyükgüngör.
Abstract
In the title compound, C20H23NO, the cyclo-hepta-none ring adopts a twist-chair conformation, with the amino-methyl substituent in an equatorial position. The relative configuration of the two stereocenters is R,R. In the crystal, mol-ecules are linked by N-H⋯O hydrogen bonds into chains along [100].Entities:
Year: 2012 PMID: 23476371 PMCID: PMC3588277 DOI: 10.1107/S1600536812050659
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C20H23NO | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 10757 reflections |
| θ = 1.7–28.0° | |
| µ = 0.07 mm−1 | |
| β = 99.371 (6)° | Prism, colourless |
| 0.72 × 0.56 × 0.27 mm | |
| Stoe IPDS 2 diffractometer | 3449 independent reflections |
| Radiation source: fine-focus sealed tube | 2170 reflections with |
| Graphite monochromator | |
| rotation method scans | θmax = 26.5°, θmin = 1.7° |
| Absorption correction: integration ( | |
| 10757 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 3449 reflections | (Δ/σ)max < 0.001 |
| 203 parameters | Δρmax = 0.26 e Å−3 |
| 0 restraints | Δρmin = −0.13 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.4026 (3) | 0.45073 (9) | 0.32943 (9) | 0.0508 (4) | |
| H1 | 0.5213 | 0.4211 | 0.3065 | 0.061* | |
| C2 | 0.1676 (3) | 0.41004 (10) | 0.30531 (10) | 0.0545 (4) | |
| C3 | 0.1590 (3) | 0.31909 (11) | 0.28983 (11) | 0.0680 (5) | |
| H3A | 0.1590 | 0.3111 | 0.2370 | 0.082* | |
| H3B | 0.0108 | 0.2978 | 0.3008 | 0.082* | |
| C4 | 0.3563 (4) | 0.26786 (11) | 0.33231 (12) | 0.0750 (6) | |
| H4A | 0.3205 | 0.2097 | 0.3229 | 0.090* | |
| H4B | 0.5002 | 0.2801 | 0.3131 | 0.090* | |
| C5 | 0.3998 (5) | 0.28183 (13) | 0.41489 (13) | 0.0919 (7) | |
| H5A | 0.2488 | 0.2880 | 0.4315 | 0.110* | |
| H5B | 0.4747 | 0.2328 | 0.4388 | 0.110* | |
| C6 | 0.5488 (5) | 0.35543 (15) | 0.44101 (12) | 0.0922 (7) | |
| H6A | 0.5733 | 0.3557 | 0.4950 | 0.111* | |
| H6B | 0.7017 | 0.3476 | 0.4261 | 0.111* | |
| C7 | 0.4594 (4) | 0.43901 (13) | 0.41458 (11) | 0.0786 (6) | |
| H7A | 0.5761 | 0.4800 | 0.4346 | 0.094* | |
| H7B | 0.3177 | 0.4505 | 0.4353 | 0.094* | |
| C8 | 0.4030 (3) | 0.54291 (9) | 0.30610 (10) | 0.0533 (4) | |
| H8 | 0.2812 | 0.5716 | 0.3283 | 0.064* | |
| C9 | 0.5035 (3) | 0.52774 (10) | 0.17700 (11) | 0.0606 (5) | |
| H9 | 0.6439 | 0.5026 | 0.1982 | 0.073* | |
| C10 | 0.4556 (4) | 0.53841 (12) | 0.10111 (12) | 0.0726 (5) | |
| H10 | 0.5642 | 0.5210 | 0.0717 | 0.087* | |
| C11 | 0.2490 (4) | 0.57456 (13) | 0.06854 (13) | 0.0801 (6) | |
| H11 | 0.2159 | 0.5810 | 0.0171 | 0.096* | |
| C12 | 0.0910 (4) | 0.60127 (14) | 0.11243 (14) | 0.0850 (7) | |
| H12 | −0.0489 | 0.6264 | 0.0907 | 0.102* | |
| C13 | 0.1397 (3) | 0.59089 (12) | 0.18865 (12) | 0.0713 (5) | |
| H13 | 0.0314 | 0.6093 | 0.2178 | 0.086* | |
| C14 | 0.3459 (3) | 0.55379 (9) | 0.22262 (10) | 0.0530 (4) | |
| C15 | 0.6636 (3) | 0.65940 (9) | 0.36011 (9) | 0.0525 (4) | |
| C16 | 0.8846 (3) | 0.68313 (11) | 0.39812 (10) | 0.0604 (4) | |
| H16 | 1.0051 | 0.6441 | 0.4065 | 0.073* | |
| C17 | 0.9275 (4) | 0.76247 (12) | 0.42320 (12) | 0.0706 (5) | |
| H17 | 1.0764 | 0.7766 | 0.4481 | 0.085* | |
| C18 | 0.7531 (4) | 0.82152 (12) | 0.41206 (12) | 0.0760 (6) | |
| H18 | 0.7823 | 0.8754 | 0.4293 | 0.091* | |
| C19 | 0.5343 (4) | 0.79933 (11) | 0.37481 (12) | 0.0688 (5) | |
| H19 | 0.4152 | 0.8389 | 0.3671 | 0.083* | |
| C20 | 0.4877 (3) | 0.71963 (10) | 0.34864 (10) | 0.0587 (4) | |
| H20 | 0.3387 | 0.7062 | 0.3233 | 0.070* | |
| N1 | 0.6284 (3) | 0.57845 (9) | 0.33722 (10) | 0.0661 (5) | |
| O1 | −0.0127 (2) | 0.44979 (8) | 0.30255 (10) | 0.0854 (5) | |
| H1A | 0.751 (3) | 0.5457 (11) | 0.3392 (10) | 0.064 (5)* |
| C1 | 0.0554 (9) | 0.0428 (8) | 0.0545 (10) | 0.0063 (7) | 0.0095 (7) | −0.0041 (7) |
| C2 | 0.0518 (9) | 0.0529 (9) | 0.0604 (11) | 0.0067 (8) | 0.0142 (8) | 0.0069 (8) |
| C3 | 0.0697 (11) | 0.0561 (10) | 0.0797 (13) | −0.0070 (9) | 0.0166 (9) | −0.0084 (9) |
| C4 | 0.0957 (15) | 0.0449 (9) | 0.0878 (15) | 0.0060 (10) | 0.0253 (11) | 0.0033 (9) |
| C5 | 0.132 (2) | 0.0664 (13) | 0.0802 (16) | 0.0179 (13) | 0.0271 (14) | 0.0195 (11) |
| C6 | 0.1148 (18) | 0.0980 (17) | 0.0584 (13) | 0.0108 (15) | −0.0023 (12) | 0.0184 (11) |
| C7 | 0.1024 (16) | 0.0695 (12) | 0.0605 (12) | 0.0015 (11) | 0.0029 (11) | −0.0085 (10) |
| C8 | 0.0482 (9) | 0.0410 (8) | 0.0709 (11) | 0.0037 (7) | 0.0104 (8) | −0.0043 (7) |
| C9 | 0.0577 (10) | 0.0510 (9) | 0.0719 (13) | 0.0038 (8) | 0.0067 (9) | −0.0009 (8) |
| C10 | 0.0826 (14) | 0.0633 (12) | 0.0738 (14) | 0.0020 (10) | 0.0182 (11) | −0.0008 (9) |
| C11 | 0.0962 (16) | 0.0693 (12) | 0.0719 (13) | 0.0007 (12) | 0.0054 (12) | 0.0129 (10) |
| C12 | 0.0760 (14) | 0.0830 (14) | 0.0903 (17) | 0.0155 (11) | −0.0031 (12) | 0.0220 (12) |
| C13 | 0.0606 (11) | 0.0674 (11) | 0.0857 (15) | 0.0125 (9) | 0.0110 (10) | 0.0134 (10) |
| C14 | 0.0509 (9) | 0.0348 (7) | 0.0730 (12) | −0.0021 (7) | 0.0092 (8) | 0.0022 (7) |
| C15 | 0.0585 (10) | 0.0456 (8) | 0.0551 (10) | −0.0011 (7) | 0.0142 (7) | −0.0021 (7) |
| C16 | 0.0588 (10) | 0.0578 (10) | 0.0639 (11) | 0.0009 (8) | 0.0076 (8) | −0.0071 (8) |
| C17 | 0.0700 (12) | 0.0648 (11) | 0.0757 (13) | −0.0106 (10) | 0.0076 (10) | −0.0152 (9) |
| C18 | 0.0901 (14) | 0.0522 (10) | 0.0873 (15) | −0.0114 (10) | 0.0198 (11) | −0.0138 (10) |
| C19 | 0.0754 (12) | 0.0462 (9) | 0.0876 (14) | 0.0064 (9) | 0.0215 (10) | 0.0000 (9) |
| C20 | 0.0591 (10) | 0.0469 (9) | 0.0707 (12) | 0.0001 (8) | 0.0122 (8) | 0.0007 (8) |
| N1 | 0.0520 (9) | 0.0463 (8) | 0.0961 (13) | 0.0057 (7) | 0.0010 (8) | −0.0161 (7) |
| O1 | 0.0558 (8) | 0.0696 (9) | 0.1328 (14) | 0.0105 (7) | 0.0216 (8) | 0.0106 (8) |
| C1—C2 | 1.502 (2) | C9—C14 | 1.390 (2) |
| C1—C7 | 1.542 (2) | C9—H9 | 0.9300 |
| C1—C8 | 1.547 (2) | C10—C11 | 1.369 (3) |
| C1—H1 | 0.9800 | C10—H10 | 0.9300 |
| C2—O1 | 1.214 (2) | C11—C12 | 1.373 (3) |
| C2—C3 | 1.493 (2) | C11—H11 | 0.9300 |
| C3—C4 | 1.511 (3) | C12—C13 | 1.380 (3) |
| C3—H3A | 0.9700 | C12—H12 | 0.9300 |
| C3—H3B | 0.9700 | C13—C14 | 1.382 (2) |
| C4—C5 | 1.500 (3) | C13—H13 | 0.9300 |
| C4—H4A | 0.9700 | C15—N1 | 1.376 (2) |
| C4—H4B | 0.9700 | C15—C20 | 1.394 (2) |
| C5—C6 | 1.496 (3) | C15—C16 | 1.399 (2) |
| C5—H5A | 0.9700 | C16—C17 | 1.368 (2) |
| C5—H5B | 0.9700 | C16—H16 | 0.9300 |
| C6—C7 | 1.495 (3) | C17—C18 | 1.375 (3) |
| C6—H6A | 0.9700 | C17—H17 | 0.9300 |
| C6—H6B | 0.9700 | C18—C19 | 1.376 (3) |
| C7—H7A | 0.9700 | C18—H18 | 0.9300 |
| C7—H7B | 0.9700 | C19—C20 | 1.382 (2) |
| C8—N1 | 1.446 (2) | C19—H19 | 0.9300 |
| C8—C14 | 1.511 (2) | C20—H20 | 0.9300 |
| C8—H8 | 0.9800 | N1—H1A | 0.879 (19) |
| C9—C10 | 1.374 (3) | ||
| C2—C1—C7 | 105.86 (14) | N1—C8—H8 | 107.9 |
| C2—C1—C8 | 112.43 (13) | C14—C8—H8 | 107.9 |
| C7—C1—C8 | 112.58 (14) | C1—C8—H8 | 107.9 |
| C2—C1—H1 | 108.6 | C10—C9—C14 | 121.25 (17) |
| C7—C1—H1 | 108.6 | C10—C9—H9 | 119.4 |
| C8—C1—H1 | 108.6 | C14—C9—H9 | 119.4 |
| O1—C2—C3 | 120.63 (16) | C11—C10—C9 | 120.4 (2) |
| O1—C2—C1 | 120.23 (15) | C11—C10—H10 | 119.8 |
| C3—C2—C1 | 119.02 (14) | C9—C10—H10 | 119.8 |
| C2—C3—C4 | 116.21 (16) | C10—C11—C12 | 119.5 (2) |
| C2—C3—H3A | 108.2 | C10—C11—H11 | 120.3 |
| C4—C3—H3A | 108.2 | C12—C11—H11 | 120.3 |
| C2—C3—H3B | 108.2 | C11—C12—C13 | 120.1 (2) |
| C4—C3—H3B | 108.2 | C11—C12—H12 | 120.0 |
| H3A—C3—H3B | 107.4 | C13—C12—H12 | 120.0 |
| C5—C4—C3 | 114.78 (17) | C12—C13—C14 | 121.4 (2) |
| C5—C4—H4A | 108.6 | C12—C13—H13 | 119.3 |
| C3—C4—H4A | 108.6 | C14—C13—H13 | 119.3 |
| C5—C4—H4B | 108.6 | C13—C14—C9 | 117.37 (18) |
| C3—C4—H4B | 108.6 | C13—C14—C8 | 122.03 (16) |
| H4A—C4—H4B | 107.5 | C9—C14—C8 | 120.59 (15) |
| C6—C5—C4 | 115.53 (18) | N1—C15—C20 | 123.29 (16) |
| C6—C5—H5A | 108.4 | N1—C15—C16 | 119.13 (15) |
| C4—C5—H5A | 108.4 | C20—C15—C16 | 117.57 (15) |
| C6—C5—H5B | 108.4 | C17—C16—C15 | 121.42 (17) |
| C4—C5—H5B | 108.4 | C17—C16—H16 | 119.3 |
| H5A—C5—H5B | 107.5 | C15—C16—H16 | 119.3 |
| C7—C6—C5 | 117.68 (19) | C16—C17—C18 | 120.77 (18) |
| C7—C6—H6A | 107.9 | C16—C17—H17 | 119.6 |
| C5—C6—H6A | 107.9 | C18—C17—H17 | 119.6 |
| C7—C6—H6B | 107.9 | C17—C18—C19 | 118.66 (17) |
| C5—C6—H6B | 107.9 | C17—C18—H18 | 120.7 |
| H6A—C6—H6B | 107.2 | C19—C18—H18 | 120.7 |
| C6—C7—C1 | 116.06 (17) | C18—C19—C20 | 121.50 (18) |
| C6—C7—H7A | 108.3 | C18—C19—H19 | 119.3 |
| C1—C7—H7A | 108.3 | C20—C19—H19 | 119.3 |
| C6—C7—H7B | 108.3 | C19—C20—C15 | 120.08 (17) |
| C1—C7—H7B | 108.3 | C19—C20—H20 | 120.0 |
| H7A—C7—H7B | 107.4 | C15—C20—H20 | 120.0 |
| N1—C8—C14 | 112.45 (14) | C15—N1—C8 | 124.99 (15) |
| N1—C8—C1 | 108.37 (13) | C15—N1—H1A | 118.8 (12) |
| C14—C8—C1 | 112.20 (13) | C8—N1—H1A | 116.2 (11) |
| C7—C1—C2—O1 | 90.59 (19) | C12—C13—C14—C9 | 0.4 (3) |
| C8—C1—C2—O1 | −32.7 (2) | C12—C13—C14—C8 | 179.25 (17) |
| C7—C1—C2—C3 | −85.34 (18) | C10—C9—C14—C13 | −0.1 (2) |
| C8—C1—C2—C3 | 151.35 (16) | C10—C9—C14—C8 | −178.96 (15) |
| O1—C2—C3—C4 | −147.48 (19) | N1—C8—C14—C13 | −125.11 (17) |
| C1—C2—C3—C4 | 28.4 (2) | C1—C8—C14—C13 | 112.42 (17) |
| C2—C3—C4—C5 | 50.6 (2) | N1—C8—C14—C9 | 53.71 (18) |
| C3—C4—C5—C6 | −82.4 (3) | C1—C8—C14—C9 | −68.77 (18) |
| C4—C5—C6—C7 | 61.6 (3) | N1—C15—C16—C17 | −178.84 (17) |
| C5—C6—C7—C1 | −56.2 (3) | C20—C15—C16—C17 | 0.0 (3) |
| C2—C1—C7—C6 | 78.4 (2) | C15—C16—C17—C18 | 0.3 (3) |
| C8—C1—C7—C6 | −158.42 (19) | C16—C17—C18—C19 | −0.3 (3) |
| C2—C1—C8—N1 | 175.01 (14) | C17—C18—C19—C20 | −0.1 (3) |
| C7—C1—C8—N1 | 55.55 (19) | C18—C19—C20—C15 | 0.4 (3) |
| C2—C1—C8—C14 | −60.23 (18) | N1—C15—C20—C19 | 178.42 (18) |
| C7—C1—C8—C14 | −179.69 (15) | C16—C15—C20—C19 | −0.4 (3) |
| C14—C9—C10—C11 | −0.6 (3) | C20—C15—N1—C8 | −7.0 (3) |
| C9—C10—C11—C12 | 1.0 (3) | C16—C15—N1—C8 | 171.72 (16) |
| C10—C11—C12—C13 | −0.7 (3) | C14—C8—N1—C15 | 87.9 (2) |
| C11—C12—C13—C14 | 0.0 (3) | C1—C8—N1—C15 | −147.48 (17) |
| H··· | ||||
| N1—H1 | 0.879 (19) | 2.23 (2) | 3.065 (2) | 158.4 (16) |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N1—H1 | 0.879 (19) | 2.23 (2) | 3.065 (2) | 158.4 (16) |
Symmetry code: (i) .