| Literature DB >> 23125635 |
Bagher Eftekhari-Sis1, Sahar Mohajer, Orhan Büyükgüngör.
Abstract
In the title compound, C(19)H(20)N(2)O(3), the cyclo-hexa-none ring adopts a chair conformation with the amino-methyl group is positioned equatorially. An intra-molecular N-H⋯O hydrogen bond occurs. In the crystal, mol-ecules are linked by N-H⋯O hydrogen bonds.Entities:
Year: 2012 PMID: 23125635 PMCID: PMC3470191 DOI: 10.1107/S1600536812036859
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C19H20N2O3 | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 10888 reflections |
| θ = 1.7–28.1° | |
| µ = 0.09 mm−1 | |
| β = 117.355 (6)° | Prism, colorless |
| 0.62 × 0.43 × 0.21 mm | |
| Stoe IPDS 2 diffractometer | 3434 independent reflections |
| Radiation source: fine-focus sealed tube | 2210 reflections with |
| Graphite monochromator | |
| rotation method scans | θmax = 26.5°, θmin = 2.5° |
| Absorption correction: integration ( | |
| 10888 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 3434 reflections | (Δ/σ)max < 0.001 |
| 221 parameters | Δρmax = 0.79 e Å−3 |
| 16 restraints | Δρmin = −0.23 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.3530 (2) | 0.26145 (18) | 0.22061 (12) | 0.0453 (5) | |
| H1 | 0.2966 | 0.3031 | 0.2482 | 0.054* | |
| C2 | 0.2739 (2) | 0.1473 (2) | 0.19939 (13) | 0.0505 (5) | |
| C3 | 0.0911 (3) | 0.1470 (3) | 0.13652 (16) | 0.0690 (7) | |
| H3A | 0.0301 | 0.1828 | 0.1635 | 0.083* | |
| H3B | 0.0522 | 0.0707 | 0.1229 | 0.083* | |
| C4 | 0.0580 (3) | 0.2080 (3) | 0.05272 (15) | 0.0731 (8) | |
| H4A | 0.1080 | 0.1670 | 0.0223 | 0.088* | |
| H4B | −0.0610 | 0.2115 | 0.0149 | 0.088* | |
| C5 | 0.1274 (3) | 0.3236 (3) | 0.07141 (16) | 0.0730 (8) | |
| H5A | 0.0699 | 0.3667 | 0.0969 | 0.088* | |
| H5B | 0.1089 | 0.3592 | 0.0172 | 0.088* | |
| C6 | 0.3130 (3) | 0.3223 (2) | 0.13399 (16) | 0.0660 (7) | |
| H6A | 0.3532 | 0.3984 | 0.1468 | 0.079* | |
| H6B | 0.3713 | 0.2856 | 0.1059 | 0.079* | |
| C7 | 0.5407 (2) | 0.26636 (18) | 0.28430 (12) | 0.0429 (5) | |
| H7 | 0.5759 | 0.3436 | 0.2840 | 0.052* | |
| C8 | 0.5807 (2) | 0.23927 (17) | 0.37935 (12) | 0.0414 (4) | |
| C9 | 0.5888 (2) | 0.31751 (17) | 0.44110 (13) | 0.0448 (5) | |
| C10 | 0.6289 (3) | 0.2903 (2) | 0.52741 (15) | 0.0574 (6) | |
| H10 | 0.6344 | 0.3455 | 0.5666 | 0.069* | |
| C11 | 0.6599 (3) | 0.1815 (2) | 0.55354 (16) | 0.0655 (7) | |
| H11 | 0.6837 | 0.1613 | 0.6102 | 0.079* | |
| C12 | 0.6555 (3) | 0.1022 (2) | 0.49480 (16) | 0.0636 (6) | |
| H12 | 0.6772 | 0.0281 | 0.5123 | 0.076* | |
| C13 | 0.6193 (3) | 0.13097 (19) | 0.41035 (14) | 0.0531 (5) | |
| H13 | 0.6209 | 0.0757 | 0.3729 | 0.064* | |
| C14 | 0.8043 (2) | 0.20265 (19) | 0.28812 (12) | 0.0455 (5) | |
| C15 | 0.8911 (3) | 0.3024 (2) | 0.31590 (16) | 0.0613 (6) | |
| H15 | 0.8341 | 0.3686 | 0.3111 | 0.074* | |
| C16 | 1.0631 (3) | 0.3029 (3) | 0.35075 (17) | 0.0752 (8) | |
| H16 | 1.1208 | 0.3698 | 0.3693 | 0.090* | |
| C17 | 1.1495 (3) | 0.2056 (3) | 0.35827 (16) | 0.0750 (9) | |
| H17 | 1.2650 | 0.2063 | 0.3830 | 0.090* | |
| C18 | 1.0634 (3) | 0.1077 (3) | 0.32882 (17) | 0.0726 (8) | |
| H18 | 1.1208 | 0.0422 | 0.3320 | 0.087* | |
| C19 | 0.8934 (3) | 0.1054 (2) | 0.29467 (15) | 0.0580 (6) | |
| H19 | 0.8370 | 0.0381 | 0.2757 | 0.070* | |
| N1 | 0.6308 (2) | 0.19843 (17) | 0.25075 (11) | 0.0467 (4) | |
| N2 | 0.5569 (2) | 0.43539 (16) | 0.41868 (13) | 0.0545 (5) | |
| O1 | 0.3490 (2) | 0.06234 (15) | 0.22935 (12) | 0.0718 (5) | |
| O2 | 0.4393 (2) | 0.46052 (15) | 0.34977 (12) | 0.0711 (5) | |
| O3 | 0.6465 (3) | 0.50448 (17) | 0.47103 (14) | 0.0861 (6) | |
| H1A | 0.593 (3) | 0.133 (2) | 0.2363 (14) | 0.046 (6)* |
| C1 | 0.0372 (9) | 0.0539 (13) | 0.0416 (10) | 0.0030 (8) | 0.0155 (8) | 0.0015 (9) |
| C2 | 0.0409 (10) | 0.0643 (13) | 0.0424 (11) | −0.0054 (8) | 0.0158 (8) | 0.0008 (9) |
| C3 | 0.0425 (11) | 0.090 (2) | 0.0587 (14) | −0.0105 (11) | 0.0094 (10) | 0.0033 (13) |
| C4 | 0.0445 (12) | 0.115 (3) | 0.0449 (12) | 0.0038 (13) | 0.0080 (10) | −0.0011 (13) |
| C5 | 0.0605 (14) | 0.093 (2) | 0.0534 (14) | 0.0169 (13) | 0.0157 (11) | 0.0192 (13) |
| C6 | 0.0604 (13) | 0.0680 (17) | 0.0568 (14) | 0.0042 (11) | 0.0160 (11) | 0.0186 (12) |
| C7 | 0.0384 (9) | 0.0447 (11) | 0.0438 (10) | −0.0013 (8) | 0.0173 (8) | −0.0015 (9) |
| C8 | 0.0294 (8) | 0.0471 (12) | 0.0420 (10) | −0.0005 (7) | 0.0116 (7) | −0.0023 (9) |
| C9 | 0.0356 (9) | 0.0486 (12) | 0.0474 (11) | 0.0007 (8) | 0.0166 (8) | −0.0039 (9) |
| C10 | 0.0526 (12) | 0.0719 (17) | 0.0474 (12) | 0.0040 (10) | 0.0226 (10) | −0.0071 (11) |
| C11 | 0.0619 (13) | 0.086 (2) | 0.0441 (11) | 0.0112 (12) | 0.0205 (10) | 0.0105 (12) |
| C12 | 0.0692 (14) | 0.0574 (16) | 0.0569 (14) | 0.0108 (11) | 0.0227 (11) | 0.0139 (12) |
| C13 | 0.0545 (11) | 0.0482 (13) | 0.0485 (11) | 0.0039 (9) | 0.0168 (9) | 0.0007 (10) |
| C14 | 0.0387 (9) | 0.0631 (14) | 0.0350 (9) | −0.0016 (8) | 0.0171 (8) | 0.0002 (9) |
| C15 | 0.0499 (12) | 0.0755 (17) | 0.0601 (13) | −0.0119 (11) | 0.0267 (10) | −0.0143 (12) |
| C16 | 0.0541 (14) | 0.111 (2) | 0.0618 (15) | −0.0289 (14) | 0.0275 (12) | −0.0200 (15) |
| C17 | 0.0396 (11) | 0.135 (3) | 0.0495 (13) | −0.0052 (14) | 0.0200 (10) | 0.0048 (15) |
| C18 | 0.0518 (13) | 0.104 (2) | 0.0636 (15) | 0.0196 (14) | 0.0278 (11) | 0.0205 (15) |
| C19 | 0.0481 (11) | 0.0691 (16) | 0.0570 (13) | 0.0066 (10) | 0.0243 (10) | 0.0072 (11) |
| N1 | 0.0382 (8) | 0.0505 (12) | 0.0492 (10) | −0.0036 (7) | 0.0184 (7) | −0.0092 (8) |
| N2 | 0.0535 (10) | 0.0533 (12) | 0.0605 (12) | −0.0005 (8) | 0.0294 (9) | −0.0071 (9) |
| O1 | 0.0614 (10) | 0.0610 (11) | 0.0812 (12) | −0.0048 (7) | 0.0226 (9) | 0.0008 (9) |
| O2 | 0.0737 (11) | 0.0559 (11) | 0.0707 (11) | 0.0117 (8) | 0.0220 (9) | 0.0046 (9) |
| O3 | 0.0958 (14) | 0.0607 (12) | 0.0903 (13) | −0.0195 (10) | 0.0329 (11) | −0.0274 (10) |
| C1—C2 | 1.510 (3) | C9—N2 | 1.459 (3) |
| C1—C7 | 1.543 (2) | C10—C11 | 1.367 (4) |
| C1—C6 | 1.547 (3) | C10—H10 | 0.9300 |
| C1—H1 | 0.9800 | C11—C12 | 1.376 (4) |
| C2—O1 | 1.202 (3) | C11—H11 | 0.9300 |
| C2—C3 | 1.505 (3) | C12—C13 | 1.380 (3) |
| C3—C4 | 1.521 (4) | C12—H12 | 0.9300 |
| C3—H3A | 0.9700 | C13—H13 | 0.9300 |
| C3—H3B | 0.9700 | C14—C15 | 1.391 (3) |
| C4—C5 | 1.494 (4) | C14—C19 | 1.392 (3) |
| C4—H4A | 0.9700 | C14—N1 | 1.399 (2) |
| C4—H4B | 0.9700 | C15—C16 | 1.388 (3) |
| C5—C6 | 1.523 (3) | C15—H15 | 0.9300 |
| C5—H5A | 0.9700 | C16—C17 | 1.378 (4) |
| C5—H5B | 0.9700 | C16—H16 | 0.9300 |
| C6—H6A | 0.9700 | C17—C18 | 1.371 (4) |
| C6—H6B | 0.9700 | C17—H17 | 0.9300 |
| C7—N1 | 1.448 (3) | C18—C19 | 1.373 (3) |
| C7—C8 | 1.541 (3) | C18—H18 | 0.9300 |
| C7—H7 | 0.9800 | C19—H19 | 0.9300 |
| C8—C13 | 1.387 (3) | N1—H1A | 0.85 (2) |
| C8—C9 | 1.395 (3) | N2—O2 | 1.214 (2) |
| C9—C10 | 1.398 (3) | N2—O3 | 1.219 (3) |
| C2—C1—C7 | 116.84 (17) | C9—C8—C7 | 124.96 (18) |
| C2—C1—C6 | 108.61 (18) | C8—C9—C10 | 123.4 (2) |
| C7—C1—C6 | 111.16 (16) | C8—C9—N2 | 121.02 (19) |
| C2—C1—H1 | 106.5 | C10—C9—N2 | 115.56 (19) |
| C7—C1—H1 | 106.5 | C11—C10—C9 | 119.2 (2) |
| C6—C1—H1 | 106.5 | C11—C10—H10 | 120.4 |
| O1—C2—C3 | 121.7 (2) | C9—C10—H10 | 120.4 |
| O1—C2—C1 | 123.57 (18) | C10—C11—C12 | 119.0 (2) |
| C3—C2—C1 | 114.8 (2) | C10—C11—H11 | 120.5 |
| C2—C3—C4 | 110.71 (19) | C12—C11—H11 | 120.5 |
| C2—C3—H3A | 109.5 | C11—C12—C13 | 121.0 (2) |
| C4—C3—H3A | 109.5 | C11—C12—H12 | 119.5 |
| C2—C3—H3B | 109.5 | C13—C12—H12 | 119.5 |
| C4—C3—H3B | 109.5 | C12—C13—C8 | 122.4 (2) |
| H3A—C3—H3B | 108.1 | C12—C13—H13 | 118.8 |
| C5—C4—C3 | 111.2 (2) | C8—C13—H13 | 118.8 |
| C5—C4—H4A | 109.4 | C15—C14—C19 | 118.60 (19) |
| C3—C4—H4A | 109.4 | C15—C14—N1 | 121.8 (2) |
| C5—C4—H4B | 109.4 | C19—C14—N1 | 119.5 (2) |
| C3—C4—H4B | 109.4 | C16—C15—C14 | 119.8 (2) |
| H4A—C4—H4B | 108.0 | C16—C15—H15 | 120.1 |
| C4—C5—C6 | 111.1 (2) | C14—C15—H15 | 120.1 |
| C4—C5—H5A | 109.4 | C17—C16—C15 | 120.9 (3) |
| C6—C5—H5A | 109.4 | C17—C16—H16 | 119.6 |
| C4—C5—H5B | 109.4 | C15—C16—H16 | 119.6 |
| C6—C5—H5B | 109.4 | C18—C17—C16 | 119.3 (2) |
| H5A—C5—H5B | 108.0 | C18—C17—H17 | 120.4 |
| C5—C6—C1 | 112.4 (2) | C16—C17—H17 | 120.4 |
| C5—C6—H6A | 109.1 | C17—C18—C19 | 120.7 (3) |
| C1—C6—H6A | 109.1 | C17—C18—H18 | 119.6 |
| C5—C6—H6B | 109.1 | C19—C18—H18 | 119.6 |
| C1—C6—H6B | 109.1 | C18—C19—C14 | 120.7 (2) |
| H6A—C6—H6B | 107.9 | C18—C19—H19 | 119.6 |
| N1—C7—C8 | 113.92 (16) | C14—C19—H19 | 119.6 |
| N1—C7—C1 | 109.45 (16) | C14—N1—C7 | 121.03 (17) |
| C8—C7—C1 | 113.04 (15) | C14—N1—H1A | 112.7 (14) |
| N1—C7—H7 | 106.6 | C7—N1—H1A | 114.4 (14) |
| C8—C7—H7 | 106.6 | O2—N2—O3 | 122.8 (2) |
| C1—C7—H7 | 106.6 | O2—N2—C9 | 118.52 (18) |
| C13—C8—C9 | 114.90 (19) | O3—N2—C9 | 118.7 (2) |
| C13—C8—C7 | 120.08 (18) | ||
| C7—C1—C2—O1 | 0.1 (3) | C8—C9—C10—C11 | −1.0 (3) |
| C6—C1—C2—O1 | 126.8 (2) | N2—C9—C10—C11 | 179.8 (2) |
| C7—C1—C2—C3 | −179.56 (18) | C9—C10—C11—C12 | 1.9 (3) |
| C6—C1—C2—C3 | −52.9 (2) | C10—C11—C12—C13 | −0.4 (4) |
| O1—C2—C3—C4 | −125.0 (3) | C11—C12—C13—C8 | −2.1 (4) |
| C1—C2—C3—C4 | 54.7 (3) | C9—C8—C13—C12 | 2.9 (3) |
| C2—C3—C4—C5 | −55.0 (3) | C7—C8—C13—C12 | −179.79 (19) |
| C3—C4—C5—C6 | 56.5 (3) | C19—C14—C15—C16 | −1.2 (3) |
| C4—C5—C6—C1 | −56.3 (3) | N1—C14—C15—C16 | −178.5 (2) |
| C2—C1—C6—C5 | 52.8 (3) | C14—C15—C16—C17 | 0.0 (4) |
| C7—C1—C6—C5 | −177.3 (2) | C15—C16—C17—C18 | 1.6 (4) |
| C2—C1—C7—N1 | 56.4 (2) | C16—C17—C18—C19 | −2.0 (4) |
| C6—C1—C7—N1 | −69.0 (2) | C17—C18—C19—C14 | 0.8 (4) |
| C2—C1—C7—C8 | −71.8 (2) | C15—C14—C19—C18 | 0.8 (3) |
| C6—C1—C7—C8 | 162.83 (19) | N1—C14—C19—C18 | 178.2 (2) |
| N1—C7—C8—C13 | −32.7 (2) | C15—C14—N1—C7 | −39.6 (3) |
| C1—C7—C8—C13 | 93.1 (2) | C19—C14—N1—C7 | 143.1 (2) |
| N1—C7—C8—C9 | 144.35 (18) | C8—C7—N1—C14 | −63.0 (2) |
| C1—C7—C8—C9 | −89.9 (2) | C1—C7—N1—C14 | 169.39 (18) |
| C13—C8—C9—C10 | −1.4 (3) | C8—C9—N2—O2 | 44.2 (3) |
| C7—C8—C9—C10 | −178.57 (17) | C10—C9—N2—O2 | −136.5 (2) |
| C13—C8—C9—N2 | 177.87 (17) | C8—C9—N2—O3 | −137.9 (2) |
| C7—C8—C9—N2 | 0.7 (3) | C10—C9—N2—O3 | 41.3 (3) |
| H··· | ||||
| N1—H1 | 0.85 (2) | 2.31 (2) | 2.906 (3) | 127.0 (18) |
| N1—H1 | 0.85 (2) | 2.48 (2) | 3.246 (3) | 150.2 (19) |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N1—H1 | 0.85 (2) | 2.31 (2) | 2.906 (3) | 127.0 (18) |
| N1—H1 | 0.85 (2) | 2.48 (2) | 3.246 (3) | 150.2 (19) |
Symmetry code: (i) .