Literature DB >> 23125635

2-[(Anilino)(2-nitro-phen-yl)meth-yl]cyclo-hexa-none.

Bagher Eftekhari-Sis1, Sahar Mohajer, Orhan Büyükgüngör.   

Abstract

In the title compound, C(19)H(20)N(2)O(3), the cyclo-hexa-none ring adopts a chair conformation with the amino-methyl group is positioned equatorially. An intra-molecular N-H⋯O hydrogen bond occurs. In the crystal, mol-ecules are linked by N-H⋯O hydrogen bonds.

Entities:  

Year:  2012        PMID: 23125635      PMCID: PMC3470191          DOI: 10.1107/S1600536812036859

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis of the title compound and related compounds, see: Eftekhari-Sis et al. (2012a ▶,b ▶). For the biological activity of β-amino ketones, see: Arend et al. (1998 ▶). For the anti-inflammatory and anti­microbial activity of β-amino ketones, see: Jadhav et al. (2008 ▶) and Kalluraya et al. (2001 ▶), respectively. For information on the Mannich reaction, see: Eftekhari-Sis et al. (2006 ▶); Samet et al. (2009 ▶); Azizi et al. (2006 ▶); Cordova (2004 ▶). For related structures, see: Eftekhari-Sis et al. (2012b ▶); Yuan et al. (2007 ▶); Fun et al. (2009 ▶).

Experimental

Crystal data

C19H20N2O3 M = 324.37 Monoclinic, a = 9.0535 (8) Å b = 11.9947 (7) Å c = 17.2267 (15) Å β = 117.355 (6)° V = 1661.5 (2) Å3 Z = 4 Mo Kα radiation μ = 0.09 mm−1 T = 296 K 0.62 × 0.43 × 0.21 mm

Data collection

Stoe IPDS 2 diffractometer Absorption correction: integration (X-RED32; Stoe & Cie, 2002 ▶) T min = 0.784, T max = 0.958 10888 measured reflections 3434 independent reflections 2210 reflections with I > 2σ(I) R int = 0.043

Refinement

R[F 2 > 2σ(F 2)] = 0.054 wR(F 2) = 0.160 S = 0.97 3434 reflections 221 parameters 16 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.79 e Å−3 Δρmin = −0.23 e Å−3 Data collection: X-AREA (Stoe & Cie, 2002 ▶); cell refinement: X-AREA; data reduction: X-RED32 (Stoe & Cie, 2002 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2–8); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▶); software used to prepare material for publication: WinGX (Farrugia, 2012 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812036859/fj2593sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812036859/fj2593Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812036859/fj2593Isup3.mol Supplementary material file. DOI: 10.1107/S1600536812036859/fj2593Isup4.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C19H20N2O3F(000) = 688
Mr = 324.37Dx = 1.297 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 10888 reflections
a = 9.0535 (8) Åθ = 1.7–28.1°
b = 11.9947 (7) ŵ = 0.09 mm1
c = 17.2267 (15) ÅT = 296 K
β = 117.355 (6)°Prism, colorless
V = 1661.5 (2) Å30.62 × 0.43 × 0.21 mm
Z = 4
Stoe IPDS 2 diffractometer3434 independent reflections
Radiation source: fine-focus sealed tube2210 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.043
rotation method scansθmax = 26.5°, θmin = 2.5°
Absorption correction: integration (X-RED32; Stoe & Cie, 2002)h = −11→11
Tmin = 0.784, Tmax = 0.958k = −15→14
10888 measured reflectionsl = −21→20
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.054Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.160H atoms treated by a mixture of independent and constrained refinement
S = 0.97w = 1/[σ2(Fo2) + (0.099P)2] where P = (Fo2 + 2Fc2)/3
3434 reflections(Δ/σ)max < 0.001
221 parametersΔρmax = 0.79 e Å3
16 restraintsΔρmin = −0.23 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.3530 (2)0.26145 (18)0.22061 (12)0.0453 (5)
H10.29660.30310.24820.054*
C20.2739 (2)0.1473 (2)0.19939 (13)0.0505 (5)
C30.0911 (3)0.1470 (3)0.13652 (16)0.0690 (7)
H3A0.03010.18280.16350.083*
H3B0.05220.07070.12290.083*
C40.0580 (3)0.2080 (3)0.05272 (15)0.0731 (8)
H4A0.10800.16700.02230.088*
H4B−0.06100.21150.01490.088*
C50.1274 (3)0.3236 (3)0.07141 (16)0.0730 (8)
H5A0.06990.36670.09690.088*
H5B0.10890.35920.01720.088*
C60.3130 (3)0.3223 (2)0.13399 (16)0.0660 (7)
H6A0.35320.39840.14680.079*
H6B0.37130.28560.10590.079*
C70.5407 (2)0.26636 (18)0.28430 (12)0.0429 (5)
H70.57590.34360.28400.052*
C80.5807 (2)0.23927 (17)0.37935 (12)0.0414 (4)
C90.5888 (2)0.31751 (17)0.44110 (13)0.0448 (5)
C100.6289 (3)0.2903 (2)0.52741 (15)0.0574 (6)
H100.63440.34550.56660.069*
C110.6599 (3)0.1815 (2)0.55354 (16)0.0655 (7)
H110.68370.16130.61020.079*
C120.6555 (3)0.1022 (2)0.49480 (16)0.0636 (6)
H120.67720.02810.51230.076*
C130.6193 (3)0.13097 (19)0.41035 (14)0.0531 (5)
H130.62090.07570.37290.064*
C140.8043 (2)0.20265 (19)0.28812 (12)0.0455 (5)
C150.8911 (3)0.3024 (2)0.31590 (16)0.0613 (6)
H150.83410.36860.31110.074*
C161.0631 (3)0.3029 (3)0.35075 (17)0.0752 (8)
H161.12080.36980.36930.090*
C171.1495 (3)0.2056 (3)0.35827 (16)0.0750 (9)
H171.26500.20630.38300.090*
C181.0634 (3)0.1077 (3)0.32882 (17)0.0726 (8)
H181.12080.04220.33200.087*
C190.8934 (3)0.1054 (2)0.29467 (15)0.0580 (6)
H190.83700.03810.27570.070*
N10.6308 (2)0.19843 (17)0.25075 (11)0.0467 (4)
N20.5569 (2)0.43539 (16)0.41868 (13)0.0545 (5)
O10.3490 (2)0.06234 (15)0.22935 (12)0.0718 (5)
O20.4393 (2)0.46052 (15)0.34977 (12)0.0711 (5)
O30.6465 (3)0.50448 (17)0.47103 (14)0.0861 (6)
H1A0.593 (3)0.133 (2)0.2363 (14)0.046 (6)*
U11U22U33U12U13U23
C10.0372 (9)0.0539 (13)0.0416 (10)0.0030 (8)0.0155 (8)0.0015 (9)
C20.0409 (10)0.0643 (13)0.0424 (11)−0.0054 (8)0.0158 (8)0.0008 (9)
C30.0425 (11)0.090 (2)0.0587 (14)−0.0105 (11)0.0094 (10)0.0033 (13)
C40.0445 (12)0.115 (3)0.0449 (12)0.0038 (13)0.0080 (10)−0.0011 (13)
C50.0605 (14)0.093 (2)0.0534 (14)0.0169 (13)0.0157 (11)0.0192 (13)
C60.0604 (13)0.0680 (17)0.0568 (14)0.0042 (11)0.0160 (11)0.0186 (12)
C70.0384 (9)0.0447 (11)0.0438 (10)−0.0013 (8)0.0173 (8)−0.0015 (9)
C80.0294 (8)0.0471 (12)0.0420 (10)−0.0005 (7)0.0116 (7)−0.0023 (9)
C90.0356 (9)0.0486 (12)0.0474 (11)0.0007 (8)0.0166 (8)−0.0039 (9)
C100.0526 (12)0.0719 (17)0.0474 (12)0.0040 (10)0.0226 (10)−0.0071 (11)
C110.0619 (13)0.086 (2)0.0441 (11)0.0112 (12)0.0205 (10)0.0105 (12)
C120.0692 (14)0.0574 (16)0.0569 (14)0.0108 (11)0.0227 (11)0.0139 (12)
C130.0545 (11)0.0482 (13)0.0485 (11)0.0039 (9)0.0168 (9)0.0007 (10)
C140.0387 (9)0.0631 (14)0.0350 (9)−0.0016 (8)0.0171 (8)0.0002 (9)
C150.0499 (12)0.0755 (17)0.0601 (13)−0.0119 (11)0.0267 (10)−0.0143 (12)
C160.0541 (14)0.111 (2)0.0618 (15)−0.0289 (14)0.0275 (12)−0.0200 (15)
C170.0396 (11)0.135 (3)0.0495 (13)−0.0052 (14)0.0200 (10)0.0048 (15)
C180.0518 (13)0.104 (2)0.0636 (15)0.0196 (14)0.0278 (11)0.0205 (15)
C190.0481 (11)0.0691 (16)0.0570 (13)0.0066 (10)0.0243 (10)0.0072 (11)
N10.0382 (8)0.0505 (12)0.0492 (10)−0.0036 (7)0.0184 (7)−0.0092 (8)
N20.0535 (10)0.0533 (12)0.0605 (12)−0.0005 (8)0.0294 (9)−0.0071 (9)
O10.0614 (10)0.0610 (11)0.0812 (12)−0.0048 (7)0.0226 (9)0.0008 (9)
O20.0737 (11)0.0559 (11)0.0707 (11)0.0117 (8)0.0220 (9)0.0046 (9)
O30.0958 (14)0.0607 (12)0.0903 (13)−0.0195 (10)0.0329 (11)−0.0274 (10)
C1—C21.510 (3)C9—N21.459 (3)
C1—C71.543 (2)C10—C111.367 (4)
C1—C61.547 (3)C10—H100.9300
C1—H10.9800C11—C121.376 (4)
C2—O11.202 (3)C11—H110.9300
C2—C31.505 (3)C12—C131.380 (3)
C3—C41.521 (4)C12—H120.9300
C3—H3A0.9700C13—H130.9300
C3—H3B0.9700C14—C151.391 (3)
C4—C51.494 (4)C14—C191.392 (3)
C4—H4A0.9700C14—N11.399 (2)
C4—H4B0.9700C15—C161.388 (3)
C5—C61.523 (3)C15—H150.9300
C5—H5A0.9700C16—C171.378 (4)
C5—H5B0.9700C16—H160.9300
C6—H6A0.9700C17—C181.371 (4)
C6—H6B0.9700C17—H170.9300
C7—N11.448 (3)C18—C191.373 (3)
C7—C81.541 (3)C18—H180.9300
C7—H70.9800C19—H190.9300
C8—C131.387 (3)N1—H1A0.85 (2)
C8—C91.395 (3)N2—O21.214 (2)
C9—C101.398 (3)N2—O31.219 (3)
C2—C1—C7116.84 (17)C9—C8—C7124.96 (18)
C2—C1—C6108.61 (18)C8—C9—C10123.4 (2)
C7—C1—C6111.16 (16)C8—C9—N2121.02 (19)
C2—C1—H1106.5C10—C9—N2115.56 (19)
C7—C1—H1106.5C11—C10—C9119.2 (2)
C6—C1—H1106.5C11—C10—H10120.4
O1—C2—C3121.7 (2)C9—C10—H10120.4
O1—C2—C1123.57 (18)C10—C11—C12119.0 (2)
C3—C2—C1114.8 (2)C10—C11—H11120.5
C2—C3—C4110.71 (19)C12—C11—H11120.5
C2—C3—H3A109.5C11—C12—C13121.0 (2)
C4—C3—H3A109.5C11—C12—H12119.5
C2—C3—H3B109.5C13—C12—H12119.5
C4—C3—H3B109.5C12—C13—C8122.4 (2)
H3A—C3—H3B108.1C12—C13—H13118.8
C5—C4—C3111.2 (2)C8—C13—H13118.8
C5—C4—H4A109.4C15—C14—C19118.60 (19)
C3—C4—H4A109.4C15—C14—N1121.8 (2)
C5—C4—H4B109.4C19—C14—N1119.5 (2)
C3—C4—H4B109.4C16—C15—C14119.8 (2)
H4A—C4—H4B108.0C16—C15—H15120.1
C4—C5—C6111.1 (2)C14—C15—H15120.1
C4—C5—H5A109.4C17—C16—C15120.9 (3)
C6—C5—H5A109.4C17—C16—H16119.6
C4—C5—H5B109.4C15—C16—H16119.6
C6—C5—H5B109.4C18—C17—C16119.3 (2)
H5A—C5—H5B108.0C18—C17—H17120.4
C5—C6—C1112.4 (2)C16—C17—H17120.4
C5—C6—H6A109.1C17—C18—C19120.7 (3)
C1—C6—H6A109.1C17—C18—H18119.6
C5—C6—H6B109.1C19—C18—H18119.6
C1—C6—H6B109.1C18—C19—C14120.7 (2)
H6A—C6—H6B107.9C18—C19—H19119.6
N1—C7—C8113.92 (16)C14—C19—H19119.6
N1—C7—C1109.45 (16)C14—N1—C7121.03 (17)
C8—C7—C1113.04 (15)C14—N1—H1A112.7 (14)
N1—C7—H7106.6C7—N1—H1A114.4 (14)
C8—C7—H7106.6O2—N2—O3122.8 (2)
C1—C7—H7106.6O2—N2—C9118.52 (18)
C13—C8—C9114.90 (19)O3—N2—C9118.7 (2)
C13—C8—C7120.08 (18)
C7—C1—C2—O10.1 (3)C8—C9—C10—C11−1.0 (3)
C6—C1—C2—O1126.8 (2)N2—C9—C10—C11179.8 (2)
C7—C1—C2—C3−179.56 (18)C9—C10—C11—C121.9 (3)
C6—C1—C2—C3−52.9 (2)C10—C11—C12—C13−0.4 (4)
O1—C2—C3—C4−125.0 (3)C11—C12—C13—C8−2.1 (4)
C1—C2—C3—C454.7 (3)C9—C8—C13—C122.9 (3)
C2—C3—C4—C5−55.0 (3)C7—C8—C13—C12−179.79 (19)
C3—C4—C5—C656.5 (3)C19—C14—C15—C16−1.2 (3)
C4—C5—C6—C1−56.3 (3)N1—C14—C15—C16−178.5 (2)
C2—C1—C6—C552.8 (3)C14—C15—C16—C170.0 (4)
C7—C1—C6—C5−177.3 (2)C15—C16—C17—C181.6 (4)
C2—C1—C7—N156.4 (2)C16—C17—C18—C19−2.0 (4)
C6—C1—C7—N1−69.0 (2)C17—C18—C19—C140.8 (4)
C2—C1—C7—C8−71.8 (2)C15—C14—C19—C180.8 (3)
C6—C1—C7—C8162.83 (19)N1—C14—C19—C18178.2 (2)
N1—C7—C8—C13−32.7 (2)C15—C14—N1—C7−39.6 (3)
C1—C7—C8—C1393.1 (2)C19—C14—N1—C7143.1 (2)
N1—C7—C8—C9144.35 (18)C8—C7—N1—C14−63.0 (2)
C1—C7—C8—C9−89.9 (2)C1—C7—N1—C14169.39 (18)
C13—C8—C9—C10−1.4 (3)C8—C9—N2—O244.2 (3)
C7—C8—C9—C10−178.57 (17)C10—C9—N2—O2−136.5 (2)
C13—C8—C9—N2177.87 (17)C8—C9—N2—O3−137.9 (2)
C7—C8—C9—N20.7 (3)C10—C9—N2—O341.3 (3)
D—H···AD—HH···AD···AD—H···A
N1—H1A···O10.85 (2)2.31 (2)2.906 (3)127.0 (18)
N1—H1A···O2i0.85 (2)2.48 (2)3.246 (3)150.2 (19)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N1—H1A⋯O10.85 (2)2.31 (2)2.906 (3)127.0 (18)
N1—H1A⋯O2i 0.85 (2)2.48 (2)3.246 (3)150.2 (19)

Symmetry code: (i) .

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