Literature DB >> 23476362

(9H-Fluoren-9-yl)(phen-yl)phosphinic acid.

Robert A Burrow1, Rubia M Siqueira da Silva.   

Abstract

The crystal structure of the title compound, C19H15O2P, features pairs of mol-ecules joined by O-H⋯O hydrogen bonds across crystallographic inversion centers. In addition, π-π inter-actions, with a centroid-centroid distance of 3.6273 (9) Å between the fluorene ring systems, connect the dimers into chains along [01-1]. The three rings make dihedral angles of 1.34 (9), 1.52 (10) and 1.51 (7)° with each other.

Entities:  

Year:  2012        PMID: 23476362      PMCID: PMC3588309          DOI: 10.1107/S160053681204891X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structues, see: Burrow et al. (2000 ▶); Vioux et al. (2004 ▶); Siqueira et al. (2006 ▶); Burrow & Siqueira da Silva (2011a ▶,b ▶); Burrow & Siqueira da Silva (2012 ▶). For a description of the Cambridge Structural Database and geometry checks using Mogul, see: Allen (2002 ▶); Bruno et al. (2004 ▶). For hydrogen-bond information, see: Jeffrey (1997 ▶). For the synthesis, see: Boyd & Regan (1994 ▶).

Experimental

Crystal data

C19H15O2P M = 306.28 Triclinic, a = 8.5736 (7) Å b = 9.5668 (8) Å c = 9.6750 (7) Å α = 73.348 (5)° β = 87.388 (5)° γ = 83.619 (6)° V = 755.49 (10) Å3 Z = 2 Mo Kα radiation μ = 0.19 mm−1 T = 100 K 0.28 × 0.13 × 0.07 mm

Data collection

Bruker X8 Kappa APEXII diffractometer Absorption correction: numerical (SADABS; Bruker, 2012 ▶) T min = 0.941, T max = 0.988 21221 measured reflections 4614 independent reflections 3560 reflections with I > 2σ(I) R int = 0.047

Refinement

R[F 2 > 2σ(F 2)] = 0.044 wR(F 2) = 0.112 S = 1.03 4614 reflections 202 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.33 e Å−3 Δρmin = −0.41 e Å−3 Data collection: APEX2 (Bruker, 2012 ▶); cell refinement: SAINT (Bruker, 2012 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: DIAMOND (Brandenburg, 2012 ▶); software used to prepare material for publication: PLATON (Spek, 2009 ▶) and publCIF (Westrip, 2010 ▶). Click here for additional data file. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S160053681204891X/lh5563sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S160053681204891X/lh5563Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S160053681204891X/lh5563Isup3.cdx Click here for additional data file. Supplementary material file. DOI: 10.1107/S160053681204891X/lh5563Isup4.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C19H15O2PZ = 2
Mr = 306.28F(000) = 320
Triclinic, P1Dx = 1.346 Mg m3
a = 8.5736 (7) ÅMo Kα radiation, λ = 0.71073 Å
b = 9.5668 (8) ÅCell parameters from 3726 reflections
c = 9.6750 (7) Åθ = 2.2–29.6°
α = 73.348 (5)°µ = 0.19 mm1
β = 87.388 (5)°T = 100 K
γ = 83.619 (6)°Block, colourless
V = 755.49 (10) Å30.28 × 0.13 × 0.07 mm
Bruker X8 Kappa APEXII diffractometer4614 independent reflections
Radiation source: sealed ceramic X ray tube, Siemens KFF3560 reflections with I > 2σ(I)
Graphite crystal monochromatorRint = 0.047
Detector resolution: 8.3333 pixels mm-1θmax = 30.6°, θmin = 3.1°
0.5 ° ω & φ scansh = −12→12
Absorption correction: numerical (SADABS; Bruker, 2012)k = −13→13
Tmin = 0.941, Tmax = 0.988l = −13→13
21221 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.044Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.112H atoms treated by a mixture of independent and constrained refinement
S = 1.03w = 1/[σ2(Fo2) + (0.0492P)2 + 0.2304P] where P = (Fo2 + 2Fc2)/3
4614 reflections(Δ/σ)max = 0.001
202 parametersΔρmax = 0.33 e Å3
0 restraintsΔρmin = −0.41 e Å3
Experimental. The crystal was cooled to 100 K under a cold nitrogen stream.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
P10.38649 (4)0.66642 (4)0.34500 (4)0.01663 (10)
O10.43045 (13)0.51673 (11)0.31276 (11)0.0229 (2)
H10.468 (2)0.446 (2)0.390 (2)0.034*
O20.46941 (12)0.68440 (11)0.47107 (10)0.0194 (2)
C110.17814 (16)0.68985 (15)0.37075 (14)0.0175 (3)
C120.11582 (17)0.78050 (16)0.45427 (15)0.0211 (3)
H120.18360.83020.49440.025*
C13−0.04498 (18)0.79814 (18)0.47880 (16)0.0259 (3)
H13−0.08720.86020.53530.031*
C14−0.14413 (18)0.72501 (18)0.42077 (16)0.0270 (3)
H14−0.2540.73630.43860.032*
C15−0.08337 (18)0.63552 (18)0.33692 (16)0.0263 (3)
H15−0.15170.58620.2970.032*
C160.07715 (18)0.61796 (17)0.31121 (16)0.0228 (3)
H160.11850.55710.25320.027*
C210.43723 (16)0.80119 (15)0.18013 (14)0.0169 (3)
H210.55210.7860.15890.02*
C220.39388 (16)0.95586 (15)0.18998 (14)0.0177 (3)
C230.44714 (18)1.02482 (16)0.28454 (15)0.0224 (3)
H230.52120.97410.35660.027*
C240.3897 (2)1.16927 (18)0.27144 (17)0.0272 (3)
H240.42491.2180.33530.033*
C250.2816 (2)1.24361 (17)0.16620 (18)0.0286 (4)
H250.24441.34280.15860.034*
C260.22646 (19)1.17511 (17)0.07137 (17)0.0251 (3)
H260.15171.22620.00010.03*
C270.28382 (17)1.02979 (15)0.08387 (14)0.0184 (3)
C280.25172 (17)0.93164 (16)−0.00072 (14)0.0190 (3)
C290.15364 (18)0.95394 (19)−0.11764 (16)0.0254 (3)
H290.09041.0443−0.15330.031*
C300.15047 (19)0.8417 (2)−0.18061 (16)0.0301 (4)
H300.08470.8558−0.26090.036*
C310.2418 (2)0.7084 (2)−0.12883 (17)0.0298 (4)
H310.23790.6331−0.17430.036*
C320.33901 (19)0.68459 (17)−0.01075 (16)0.0244 (3)
H320.40070.59340.02550.029*
C330.34340 (17)0.79710 (16)0.05227 (14)0.0183 (3)
U11U22U33U12U13U23
P10.01661 (18)0.01688 (17)0.01648 (17)−0.00126 (13)−0.00200 (12)−0.00478 (13)
O10.0300 (6)0.0182 (5)0.0207 (5)0.0024 (4)−0.0058 (4)−0.0071 (4)
O20.0200 (5)0.0194 (5)0.0196 (5)−0.0018 (4)−0.0046 (4)−0.0060 (4)
C110.0177 (7)0.0192 (6)0.0148 (6)−0.0048 (5)−0.0007 (5)−0.0024 (5)
C120.0193 (7)0.0264 (7)0.0186 (6)−0.0042 (6)−0.0009 (5)−0.0073 (5)
C130.0205 (7)0.0342 (8)0.0222 (7)−0.0016 (6)0.0021 (6)−0.0076 (6)
C140.0163 (7)0.0356 (9)0.0247 (7)−0.0047 (6)0.0000 (6)−0.0009 (6)
C150.0224 (8)0.0301 (8)0.0256 (7)−0.0106 (6)−0.0053 (6)−0.0031 (6)
C160.0243 (8)0.0234 (7)0.0216 (7)−0.0055 (6)−0.0033 (6)−0.0062 (6)
C210.0151 (6)0.0191 (6)0.0169 (6)−0.0027 (5)0.0010 (5)−0.0054 (5)
C220.0175 (7)0.0186 (6)0.0174 (6)−0.0052 (5)0.0049 (5)−0.0052 (5)
C230.0234 (8)0.0253 (7)0.0206 (7)−0.0090 (6)0.0033 (5)−0.0078 (6)
C240.0330 (9)0.0273 (8)0.0269 (8)−0.0133 (7)0.0089 (6)−0.0144 (6)
C250.0331 (9)0.0199 (7)0.0339 (8)−0.0058 (6)0.0124 (7)−0.0102 (6)
C260.0227 (8)0.0230 (7)0.0265 (7)−0.0005 (6)0.0061 (6)−0.0037 (6)
C270.0186 (7)0.0199 (7)0.0164 (6)−0.0043 (5)0.0048 (5)−0.0048 (5)
C280.0179 (7)0.0239 (7)0.0149 (6)−0.0043 (5)0.0032 (5)−0.0048 (5)
C290.0191 (7)0.0367 (9)0.0191 (7)−0.0033 (6)0.0010 (5)−0.0057 (6)
C300.0247 (8)0.0501 (10)0.0190 (7)−0.0090 (7)−0.0006 (6)−0.0135 (7)
C310.0322 (9)0.0407 (9)0.0244 (7)−0.0133 (7)0.0052 (6)−0.0188 (7)
C320.0266 (8)0.0264 (8)0.0232 (7)−0.0066 (6)0.0061 (6)−0.0112 (6)
C330.0186 (7)0.0219 (7)0.0157 (6)−0.0052 (5)0.0031 (5)−0.0066 (5)
P1—O21.4997 (10)C22—C271.403 (2)
P1—O11.5541 (11)C23—C241.386 (2)
P1—C111.7905 (15)C23—H230.95
P1—C211.8108 (14)C24—C251.388 (2)
O1—H10.90 (2)C24—H240.95
C11—C121.396 (2)C25—C261.396 (2)
C11—C161.400 (2)C25—H250.95
C12—C131.388 (2)C26—C271.395 (2)
C12—H120.95C26—H260.95
C13—C141.389 (2)C27—C281.4648 (19)
C13—H130.95C28—C291.393 (2)
C14—C151.387 (2)C28—C331.404 (2)
C14—H140.95C29—C301.381 (2)
C15—C161.388 (2)C29—H290.95
C15—H150.95C30—C311.392 (3)
C16—H160.95C30—H300.95
C21—C221.5140 (19)C31—C321.395 (2)
C21—C331.5181 (19)C31—H310.95
C21—H211.0C32—C331.385 (2)
C22—C231.3898 (19)C32—H320.95
O2—P1—O1114.59 (6)C24—C23—C22118.52 (15)
O2—P1—C11110.59 (6)C24—C23—H23120.7
O1—P1—C11108.24 (6)C22—C23—H23120.7
O2—P1—C21110.70 (6)C23—C24—C25120.83 (15)
O1—P1—C21104.29 (6)C23—C24—H24119.6
C11—P1—C21108.08 (6)C25—C24—H24119.6
P1—O1—H1113.2 (12)C24—C25—C26121.12 (15)
C12—C11—C16119.49 (13)C24—C25—H25119.4
C12—C11—P1118.86 (11)C26—C25—H25119.4
C16—C11—P1121.64 (11)C27—C26—C25118.36 (15)
C13—C12—C11120.14 (14)C27—C26—H26120.8
C13—C12—H12119.9C25—C26—H26120.8
C11—C12—H12119.9C26—C27—C22120.10 (14)
C12—C13—C14119.98 (15)C26—C27—C28130.83 (14)
C12—C13—H13120.0C22—C27—C28109.06 (12)
C14—C13—H13120.0C29—C28—C33120.35 (14)
C15—C14—C13120.26 (14)C29—C28—C27130.97 (14)
C15—C14—H14119.9C33—C28—C27108.67 (12)
C13—C14—H14119.9C30—C29—C28118.50 (15)
C14—C15—C16120.11 (14)C30—C29—H29120.7
C14—C15—H15119.9C28—C29—H29120.7
C16—C15—H15119.9C29—C30—C31121.31 (15)
C15—C16—C11120.00 (14)C29—C30—H30119.3
C15—C16—H16120.0C31—C30—H30119.3
C11—C16—H16120.0C30—C31—C32120.56 (15)
C22—C21—C33102.97 (11)C30—C31—H31119.7
C22—C21—P1111.40 (9)C32—C31—H31119.7
C33—C21—P1112.47 (9)C33—C32—C31118.38 (15)
C22—C21—H21109.9C33—C32—H32120.8
C33—C21—H21109.9C31—C32—H32120.8
P1—C21—H21109.9C32—C33—C28120.90 (14)
C23—C22—C27121.07 (14)C32—C33—C21129.44 (14)
C23—C22—C21129.34 (13)C28—C33—C21109.66 (12)
C27—C22—C21109.59 (12)
O2—P1—C11—C1228.54 (13)C23—C24—C25—C260.5 (2)
O1—P1—C11—C12154.83 (11)C24—C25—C26—C27−0.6 (2)
C21—P1—C11—C12−92.78 (12)C25—C26—C27—C220.1 (2)
O2—P1—C11—C16−150.46 (11)C25—C26—C27—C28−178.32 (13)
O1—P1—C11—C16−24.18 (13)C23—C22—C27—C260.3 (2)
C21—P1—C11—C1688.21 (13)C21—C22—C27—C26−179.72 (12)
C16—C11—C12—C130.5 (2)C23—C22—C27—C28179.08 (12)
P1—C11—C12—C13−178.55 (11)C21—C22—C27—C28−0.95 (15)
C11—C12—C13—C140.3 (2)C26—C27—C28—C29−0.6 (3)
C12—C13—C14—C15−0.7 (2)C22—C27—C28—C29−179.21 (14)
C13—C14—C15—C160.4 (2)C26—C27—C28—C33178.00 (14)
C14—C15—C16—C110.4 (2)C22—C27—C28—C33−0.60 (15)
C12—C11—C16—C15−0.8 (2)C33—C28—C29—C30−0.8 (2)
P1—C11—C16—C15178.15 (11)C27—C28—C29—C30177.70 (14)
O2—P1—C21—C22−59.17 (11)C28—C29—C30—C310.4 (2)
O1—P1—C21—C22177.10 (9)C29—C30—C31—C320.3 (2)
C11—P1—C21—C2262.09 (11)C30—C31—C32—C33−0.7 (2)
O2—P1—C21—C33−174.18 (9)C31—C32—C33—C280.3 (2)
O1—P1—C21—C3362.09 (11)C31—C32—C33—C21179.97 (13)
C11—P1—C21—C33−52.93 (11)C29—C28—C33—C320.4 (2)
C33—C21—C22—C23−178.06 (13)C27—C28—C33—C32−178.41 (12)
P1—C21—C22—C2361.18 (17)C29—C28—C33—C21−179.31 (12)
C33—C21—C22—C271.98 (14)C27—C28—C33—C211.90 (15)
P1—C21—C22—C27−118.78 (11)C22—C21—C33—C32177.99 (14)
C27—C22—C23—C24−0.4 (2)P1—C21—C33—C32−61.99 (17)
C21—C22—C23—C24179.68 (13)C22—C21—C33—C28−2.36 (14)
C22—C23—C24—C25−0.1 (2)P1—C21—C33—C28117.67 (11)
D—H···AD—HH···AD···AD—H···A
O1—H1···O2i0.90 (2)1.61 (2)2.5107 (15)177.9 (19)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O1—H1⋯O2i 0.90 (2)1.61 (2)2.5107 (15)177.9 (19)

Symmetry code: (i) .

  7 in total

1.  The Cambridge Structural Database: a quarter of a million crystal structures and rising.

Authors:  Frank H Allen
Journal:  Acta Crystallogr B       Date:  2002-05-29

2.  Retrieval of crystallographically-derived molecular geometry information.

Authors:  Ian J Bruno; Jason C Cole; Magnus Kessler; Jie Luo; W D Sam Motherwell; Lucy H Purkis; Barry R Smith; Robin Taylor; Richard I Cooper; Stephanie E Harris; A Guy Orpen
Journal:  J Chem Inf Comput Sci       Date:  2004 Nov-Dec

3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

4.  Benz-yl(phen-yl)phosphinic acid.

Authors:  Robert A Burrow; Rubia M Siqueira da Silva
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-04-07

5.  Meth-yl(phen-yl)phosphinic acid.

Authors:  Robert A Burrow; Rubia M Siqueira da Silva
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-07-09

6.  rac-Eth-yl(phen-yl)phosphinic acid.

Authors:  Robert A Burrow; Rubia M Siqueira da Silva
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-11-30

7.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  7 in total

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