Literature DB >> 21754372

Benz-yl(phen-yl)phosphinic acid.

Robert A Burrow1, Rubia M Siqueira da Silva.   

Abstract

The title compound, C(13)H(13)O(2)P, crystallized as enanti-omerically pure crystals; for the crystal measured, the P atom has R stereochemistry. The crystal structure displays O-H⋯O hydrogen bonding, which links individual mol-ecules related by a 2(1) screw axis parallel to the crystallographic a-axis direction into continuous chains.

Entities:  

Year:  2011        PMID: 21754372      PMCID: PMC3089092          DOI: 10.1107/S1600536811008245

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to phosphinic acids, see: Beckmann et al. (2009 ▶); Burrow et al. (2000 ▶); Chen & Suslick (1993 ▶); Siqueira et al. (2006 ▶); Vioux et al. (2004 ▶). For a description of the Cambridge Structural Database, see: Allen (2002 ▶). Geom­etrical analysis was performed with Mogul (Bruno et al., 2004 ▶).

Experimental

Crystal data

C13H13O2P M = 232.20 Orthorhombic, a = 5.7326 (2) Å b = 12.3430 (3) Å c = 16.7794 (4) Å V = 1187.27 (6) Å3 Z = 4 Mo Kα radiation μ = 0.21 mm−1 T = 295 K 0.65 × 0.34 × 0.22 mm

Data collection

Bruker X8 Kappa APEXII diffractometer Absorption correction: gaussian (SADABS; Bruker, 2009 ▶) T min = 0.880, T max = 0.964 14337 measured reflections 3451 independent reflections 3119 reflections with I > 2σ(I) R int = 0.028

Refinement

R[F 2 > 2σ(F 2)] = 0.039 wR(F 2) = 0.108 S = 1.05 3451 reflections 148 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.47 e Å−3 Δρmin = −0.23 e Å−3 Absolute structure: Flack (1983 ▶), 1447 Friedel pairs Flack parameter: 0.00 (11) Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT (Bruker, 2009 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: DIAMOND (Brandenburg, 2009 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536811008245/zb2011sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536811008245/zb2011Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C13H13O2PDx = 1.299 Mg m3
Mr = 232.20Melting point = 454–456 K
Orthorhombic, P212121Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ac 2abCell parameters from 4929 reflections
a = 5.7326 (2) Åθ = 3.3–28.0°
b = 12.3430 (3) ŵ = 0.21 mm1
c = 16.7794 (4) ÅT = 295 K
V = 1187.27 (6) Å3Block, colourless
Z = 40.65 × 0.34 × 0.22 mm
F(000) = 488
Bruker X8 Kappa APEXII diffractometer3451 independent reflections
Radiation source: fine-focus sealed tube3119 reflections with I > 2σ(I)
graphiteRint = 0.028
Detector resolution: 0.0833 pixels mm-1θmax = 30.0°, θmin = 3.5°
φ and ω scansh = −8→8
Absorption correction: gaussian (SADABS; Bruker, 2009)k = −17→17
Tmin = 0.880, Tmax = 0.964l = −20→23
14337 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.039H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.108w = 1/[σ2(Fo2) + (0.0579P)2 + 0.2054P] where P = (Fo2 + 2Fc2)/3
S = 1.05(Δ/σ)max = 0.001
3451 reflectionsΔρmax = 0.47 e Å3
148 parametersΔρmin = −0.23 e Å3
0 restraintsAbsolute structure: Flack & Bernardinelli (2000), 1447 Friedel pairs
Primary atom site location: structure-invariant direct methodsFlack parameter: 0.00 (11)
Experimental. SADABS (Bruker, 2009) was used to perform the numeric absorption correction based on the crystal dimensions determined by face indexing.The number of Friedel pairs measured is 1447. The crystal was not cut to size as it tended to fracture.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C110.0173 (3)0.51865 (12)0.54568 (9)0.0333 (3)
C120.2219 (4)0.53887 (16)0.58763 (12)0.0445 (4)
H120.33420.48490.59260.053*
C130.2585 (4)0.64005 (18)0.62216 (13)0.0530 (5)
H130.39350.65300.65130.064*
C140.0955 (4)0.72087 (17)0.61322 (14)0.0539 (5)
H140.12150.78860.63590.065*
C15−0.1073 (4)0.70186 (17)0.57065 (15)0.0539 (5)
H15−0.21700.75670.56460.065*
C16−0.1464 (3)0.60086 (15)0.53698 (12)0.0428 (4)
H16−0.28280.58810.50850.051*
C210.1121 (4)0.37609 (16)0.41002 (11)0.0463 (4)
H21A0.27680.39040.41810.056*
H21B0.09710.30220.39100.056*
C220.0212 (3)0.45208 (15)0.34658 (10)0.0400 (4)
C230.1432 (5)0.54488 (18)0.32764 (13)0.0561 (5)
H230.28200.56060.35390.067*
C240.0593 (6)0.6153 (2)0.26926 (16)0.0756 (8)
H240.14250.67770.25660.091*
C25−0.1438 (6)0.5929 (3)0.23093 (16)0.0769 (9)
H25−0.20010.64030.19240.092*
C26−0.2657 (6)0.5010 (3)0.24868 (14)0.0720 (7)
H26−0.40330.48550.22160.086*
C27−0.1855 (4)0.4311 (2)0.30663 (12)0.0535 (5)
H27−0.27090.36930.31900.064*
H10.101 (5)0.234 (3)0.5458 (19)0.080*
O10.0790 (3)0.30554 (11)0.56144 (9)0.0480 (3)
O2−0.2947 (2)0.37242 (9)0.49255 (9)0.0444 (3)
P1−0.03542 (8)0.38743 (3)0.50410 (3)0.03482 (11)
U11U22U33U12U13U23
C110.0375 (8)0.0272 (6)0.0350 (7)−0.0003 (6)0.0014 (6)−0.0005 (5)
C120.0399 (9)0.0415 (9)0.0520 (10)0.0028 (8)−0.0048 (8)−0.0043 (8)
C130.0490 (11)0.0526 (11)0.0574 (11)−0.0089 (9)−0.0107 (9)−0.0098 (9)
C140.0639 (14)0.0378 (9)0.0600 (12)−0.0056 (9)−0.0009 (10)−0.0138 (9)
C150.0590 (13)0.0342 (9)0.0684 (13)0.0105 (9)−0.0095 (10)−0.0101 (9)
C160.0420 (9)0.0341 (8)0.0525 (10)0.0031 (7)−0.0078 (8)−0.0058 (7)
C210.0504 (10)0.0418 (9)0.0465 (9)0.0155 (8)0.0003 (8)−0.0070 (8)
C220.0468 (10)0.0405 (8)0.0327 (7)0.0060 (7)0.0035 (7)−0.0051 (6)
C230.0652 (14)0.0509 (11)0.0523 (11)−0.0075 (10)0.0080 (10)−0.0044 (9)
C240.111 (2)0.0522 (13)0.0638 (14)−0.0030 (16)0.0222 (15)0.0105 (12)
C250.109 (2)0.0749 (18)0.0464 (12)0.0311 (18)0.0081 (14)0.0147 (12)
C260.0729 (15)0.103 (2)0.0404 (10)0.0214 (15)−0.0098 (11)−0.0021 (12)
C270.0559 (12)0.0641 (13)0.0405 (10)−0.0047 (10)−0.0024 (9)−0.0037 (9)
O10.0649 (10)0.0328 (6)0.0461 (7)0.0112 (6)−0.0006 (6)0.0035 (5)
O20.0413 (6)0.0326 (5)0.0592 (8)−0.0041 (5)0.0011 (6)−0.0015 (6)
P10.0409 (2)0.02614 (17)0.03746 (19)0.00195 (14)0.00110 (17)−0.00116 (16)
C11—C161.390 (2)C21—H21B0.9700
C11—C121.391 (3)C22—C231.379 (3)
C11—P11.7893 (16)C22—C271.386 (3)
C12—C131.393 (3)C23—C241.395 (4)
C12—H120.9300C23—H230.9300
C13—C141.375 (3)C24—C251.359 (5)
C13—H130.9300C24—H240.9300
C14—C151.384 (3)C25—C261.365 (5)
C14—H140.9300C25—H250.9300
C15—C161.387 (3)C26—C271.379 (4)
C15—H150.9300C26—H260.9300
C16—H160.9300C27—H270.9300
C21—C221.511 (3)O1—P11.5420 (14)
C21—P11.7962 (19)O1—H10.93 (3)
C21—H21A0.9700O2—P11.5104 (13)
C16—C11—C12119.46 (16)C23—C22—C21120.2 (2)
C16—C11—P1120.38 (13)C27—C22—C21121.29 (19)
C12—C11—P1120.15 (13)C22—C23—C24120.3 (3)
C11—C12—C13119.89 (18)C22—C23—H23119.9
C11—C12—H12120.1C24—C23—H23119.9
C13—C12—H12120.1C25—C24—C23120.0 (3)
C14—C13—C12120.20 (19)C25—C24—H24120.0
C14—C13—H13119.9C23—C24—H24120.0
C12—C13—H13119.9C24—C25—C26120.3 (2)
C13—C14—C15120.26 (18)C24—C25—H25119.8
C13—C14—H14119.9C26—C25—H25119.8
C15—C14—H14119.9C25—C26—C27120.2 (3)
C14—C15—C16119.90 (19)C25—C26—H26119.9
C14—C15—H15120.0C27—C26—H26119.9
C16—C15—H15120.0C26—C27—C22120.6 (2)
C15—C16—C11120.27 (18)C26—C27—H27119.7
C15—C16—H16119.9C22—C27—H27119.7
C11—C16—H16119.9P1—O1—H1120 (2)
C22—C21—P1114.11 (12)O2—P1—O1114.73 (8)
C22—C21—H21A108.7O2—P1—C11109.11 (8)
P1—C21—H21A108.7O1—P1—C11106.16 (8)
C22—C21—H21B108.7O2—P1—C21109.93 (9)
P1—C21—H21B108.7O1—P1—C21107.28 (8)
H21A—C21—H21B107.6C11—P1—C21109.49 (9)
C23—C22—C27118.5 (2)
C16—C11—C12—C131.6 (3)C24—C25—C26—C271.1 (4)
P1—C11—C12—C13−177.83 (16)C25—C26—C27—C22−1.1 (4)
C11—C12—C13—C14−1.6 (3)C23—C22—C27—C260.7 (3)
C12—C13—C14—C150.7 (4)C21—C22—C27—C26−179.8 (2)
C13—C14—C15—C160.1 (4)C16—C11—P1—O2−22.31 (17)
C14—C15—C16—C11−0.1 (3)C12—C11—P1—O2157.10 (14)
C12—C11—C16—C15−0.7 (3)C16—C11—P1—O1−146.45 (15)
P1—C11—C16—C15178.69 (17)C12—C11—P1—O132.96 (17)
P1—C21—C22—C23102.5 (2)C16—C11—P1—C2198.04 (16)
P1—C21—C22—C27−77.0 (2)C12—C11—P1—C21−82.55 (16)
C27—C22—C23—C24−0.2 (3)C22—C21—P1—O254.98 (17)
C21—C22—C23—C24−179.8 (2)C22—C21—P1—O1−179.66 (14)
C22—C23—C24—C250.2 (4)C22—C21—P1—C11−64.87 (17)
C23—C24—C25—C26−0.6 (4)
D—H···AD—HH···AD···AD—H···A
O1—H1···O2i0.93 (3)1.58 (3)2.4838 (18)163 (3)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1⋯O2i0.93 (3)1.58 (3)2.4838 (18)163 (3)

Symmetry code: (i) .

  3 in total

1.  The Cambridge Structural Database: a quarter of a million crystal structures and rising.

Authors:  Frank H Allen
Journal:  Acta Crystallogr B       Date:  2002-05-29

2.  Retrieval of crystallographically-derived molecular geometry information.

Authors:  Ian J Bruno; Jason C Cole; Magnus Kessler; Jie Luo; W D Sam Motherwell; Lucy H Purkis; Barry R Smith; Robin Taylor; Richard I Cooper; Stephanie E Harris; A Guy Orpen
Journal:  J Chem Inf Comput Sci       Date:  2004 Nov-Dec

3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

  3 in total
  3 in total

1.  Meth-yl(phen-yl)phosphinic acid.

Authors:  Robert A Burrow; Rubia M Siqueira da Silva
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-07-09

2.  (9H-Fluoren-9-yl)(phen-yl)phosphinic acid.

Authors:  Robert A Burrow; Rubia M Siqueira da Silva
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-12-05

3.  rac-Eth-yl(phen-yl)phosphinic acid.

Authors:  Robert A Burrow; Rubia M Siqueira da Silva
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-11-30
  3 in total

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