| Literature DB >> 21754372 |
Robert A Burrow1, Rubia M Siqueira da Silva.
Abstract
The title compound, C(13)H(13)O(2)P, crystallized as enanti-omerically pure crystals; for the crystal measured, the P atom has R stereochemistry. The crystal structure displays O-H⋯O hydrogen bonding, which links individual mol-ecules related by a 2(1) screw axis parallel to the crystallographic a-axis direction into continuous chains.Entities:
Year: 2011 PMID: 21754372 PMCID: PMC3089092 DOI: 10.1107/S1600536811008245
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C13H13O2P | |
| Melting point = 454–456 K | |
| Orthorhombic, | Mo |
| Hall symbol: P 2ac 2ab | Cell parameters from 4929 reflections |
| θ = 3.3–28.0° | |
| µ = 0.21 mm−1 | |
| Block, colourless | |
| 0.65 × 0.34 × 0.22 mm | |
| Bruker X8 Kappa APEXII diffractometer | 3451 independent reflections |
| Radiation source: fine-focus sealed tube | 3119 reflections with |
| graphite | |
| Detector resolution: 0.0833 pixels mm-1 | θmax = 30.0°, θmin = 3.5° |
| φ and ω scans | |
| Absorption correction: gaussian ( | |
| 14337 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max = 0.001 | |
| 3451 reflections | Δρmax = 0.47 e Å−3 |
| 148 parameters | Δρmin = −0.23 e Å−3 |
| 0 restraints | Absolute structure: Flack & Bernardinelli (2000), 1447 Friedel pairs |
| Primary atom site location: structure-invariant direct methods | Flack parameter: 0.00 (11) |
| Experimental. SADABS (Bruker, 2009) was used to perform the numeric absorption correction based on the crystal dimensions determined by face indexing.The number of Friedel pairs measured is 1447. The crystal was not cut to size as it tended to fracture. |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C11 | 0.0173 (3) | 0.51865 (12) | 0.54568 (9) | 0.0333 (3) | |
| C12 | 0.2219 (4) | 0.53887 (16) | 0.58763 (12) | 0.0445 (4) | |
| H12 | 0.3342 | 0.4849 | 0.5926 | 0.053* | |
| C13 | 0.2585 (4) | 0.64005 (18) | 0.62216 (13) | 0.0530 (5) | |
| H13 | 0.3935 | 0.6530 | 0.6513 | 0.064* | |
| C14 | 0.0955 (4) | 0.72087 (17) | 0.61322 (14) | 0.0539 (5) | |
| H14 | 0.1215 | 0.7886 | 0.6359 | 0.065* | |
| C15 | −0.1073 (4) | 0.70186 (17) | 0.57065 (15) | 0.0539 (5) | |
| H15 | −0.2170 | 0.7567 | 0.5646 | 0.065* | |
| C16 | −0.1464 (3) | 0.60086 (15) | 0.53698 (12) | 0.0428 (4) | |
| H16 | −0.2828 | 0.5881 | 0.5085 | 0.051* | |
| C21 | 0.1121 (4) | 0.37609 (16) | 0.41002 (11) | 0.0463 (4) | |
| H21A | 0.2768 | 0.3904 | 0.4181 | 0.056* | |
| H21B | 0.0971 | 0.3022 | 0.3910 | 0.056* | |
| C22 | 0.0212 (3) | 0.45208 (15) | 0.34658 (10) | 0.0400 (4) | |
| C23 | 0.1432 (5) | 0.54488 (18) | 0.32764 (13) | 0.0561 (5) | |
| H23 | 0.2820 | 0.5606 | 0.3539 | 0.067* | |
| C24 | 0.0593 (6) | 0.6153 (2) | 0.26926 (16) | 0.0756 (8) | |
| H24 | 0.1425 | 0.6777 | 0.2566 | 0.091* | |
| C25 | −0.1438 (6) | 0.5929 (3) | 0.23093 (16) | 0.0769 (9) | |
| H25 | −0.2001 | 0.6403 | 0.1924 | 0.092* | |
| C26 | −0.2657 (6) | 0.5010 (3) | 0.24868 (14) | 0.0720 (7) | |
| H26 | −0.4033 | 0.4855 | 0.2216 | 0.086* | |
| C27 | −0.1855 (4) | 0.4311 (2) | 0.30663 (12) | 0.0535 (5) | |
| H27 | −0.2709 | 0.3693 | 0.3190 | 0.064* | |
| H1 | 0.101 (5) | 0.234 (3) | 0.5458 (19) | 0.080* | |
| O1 | 0.0790 (3) | 0.30554 (11) | 0.56144 (9) | 0.0480 (3) | |
| O2 | −0.2947 (2) | 0.37242 (9) | 0.49255 (9) | 0.0444 (3) | |
| P1 | −0.03542 (8) | 0.38743 (3) | 0.50410 (3) | 0.03482 (11) |
| C11 | 0.0375 (8) | 0.0272 (6) | 0.0350 (7) | −0.0003 (6) | 0.0014 (6) | −0.0005 (5) |
| C12 | 0.0399 (9) | 0.0415 (9) | 0.0520 (10) | 0.0028 (8) | −0.0048 (8) | −0.0043 (8) |
| C13 | 0.0490 (11) | 0.0526 (11) | 0.0574 (11) | −0.0089 (9) | −0.0107 (9) | −0.0098 (9) |
| C14 | 0.0639 (14) | 0.0378 (9) | 0.0600 (12) | −0.0056 (9) | −0.0009 (10) | −0.0138 (9) |
| C15 | 0.0590 (13) | 0.0342 (9) | 0.0684 (13) | 0.0105 (9) | −0.0095 (10) | −0.0101 (9) |
| C16 | 0.0420 (9) | 0.0341 (8) | 0.0525 (10) | 0.0031 (7) | −0.0078 (8) | −0.0058 (7) |
| C21 | 0.0504 (10) | 0.0418 (9) | 0.0465 (9) | 0.0155 (8) | 0.0003 (8) | −0.0070 (8) |
| C22 | 0.0468 (10) | 0.0405 (8) | 0.0327 (7) | 0.0060 (7) | 0.0035 (7) | −0.0051 (6) |
| C23 | 0.0652 (14) | 0.0509 (11) | 0.0523 (11) | −0.0075 (10) | 0.0080 (10) | −0.0044 (9) |
| C24 | 0.111 (2) | 0.0522 (13) | 0.0638 (14) | −0.0030 (16) | 0.0222 (15) | 0.0105 (12) |
| C25 | 0.109 (2) | 0.0749 (18) | 0.0464 (12) | 0.0311 (18) | 0.0081 (14) | 0.0147 (12) |
| C26 | 0.0729 (15) | 0.103 (2) | 0.0404 (10) | 0.0214 (15) | −0.0098 (11) | −0.0021 (12) |
| C27 | 0.0559 (12) | 0.0641 (13) | 0.0405 (10) | −0.0047 (10) | −0.0024 (9) | −0.0037 (9) |
| O1 | 0.0649 (10) | 0.0328 (6) | 0.0461 (7) | 0.0112 (6) | −0.0006 (6) | 0.0035 (5) |
| O2 | 0.0413 (6) | 0.0326 (5) | 0.0592 (8) | −0.0041 (5) | 0.0011 (6) | −0.0015 (6) |
| P1 | 0.0409 (2) | 0.02614 (17) | 0.03746 (19) | 0.00195 (14) | 0.00110 (17) | −0.00116 (16) |
| C11—C16 | 1.390 (2) | C21—H21B | 0.9700 |
| C11—C12 | 1.391 (3) | C22—C23 | 1.379 (3) |
| C11—P1 | 1.7893 (16) | C22—C27 | 1.386 (3) |
| C12—C13 | 1.393 (3) | C23—C24 | 1.395 (4) |
| C12—H12 | 0.9300 | C23—H23 | 0.9300 |
| C13—C14 | 1.375 (3) | C24—C25 | 1.359 (5) |
| C13—H13 | 0.9300 | C24—H24 | 0.9300 |
| C14—C15 | 1.384 (3) | C25—C26 | 1.365 (5) |
| C14—H14 | 0.9300 | C25—H25 | 0.9300 |
| C15—C16 | 1.387 (3) | C26—C27 | 1.379 (4) |
| C15—H15 | 0.9300 | C26—H26 | 0.9300 |
| C16—H16 | 0.9300 | C27—H27 | 0.9300 |
| C21—C22 | 1.511 (3) | O1—P1 | 1.5420 (14) |
| C21—P1 | 1.7962 (19) | O1—H1 | 0.93 (3) |
| C21—H21A | 0.9700 | O2—P1 | 1.5104 (13) |
| C16—C11—C12 | 119.46 (16) | C23—C22—C21 | 120.2 (2) |
| C16—C11—P1 | 120.38 (13) | C27—C22—C21 | 121.29 (19) |
| C12—C11—P1 | 120.15 (13) | C22—C23—C24 | 120.3 (3) |
| C11—C12—C13 | 119.89 (18) | C22—C23—H23 | 119.9 |
| C11—C12—H12 | 120.1 | C24—C23—H23 | 119.9 |
| C13—C12—H12 | 120.1 | C25—C24—C23 | 120.0 (3) |
| C14—C13—C12 | 120.20 (19) | C25—C24—H24 | 120.0 |
| C14—C13—H13 | 119.9 | C23—C24—H24 | 120.0 |
| C12—C13—H13 | 119.9 | C24—C25—C26 | 120.3 (2) |
| C13—C14—C15 | 120.26 (18) | C24—C25—H25 | 119.8 |
| C13—C14—H14 | 119.9 | C26—C25—H25 | 119.8 |
| C15—C14—H14 | 119.9 | C25—C26—C27 | 120.2 (3) |
| C14—C15—C16 | 119.90 (19) | C25—C26—H26 | 119.9 |
| C14—C15—H15 | 120.0 | C27—C26—H26 | 119.9 |
| C16—C15—H15 | 120.0 | C26—C27—C22 | 120.6 (2) |
| C15—C16—C11 | 120.27 (18) | C26—C27—H27 | 119.7 |
| C15—C16—H16 | 119.9 | C22—C27—H27 | 119.7 |
| C11—C16—H16 | 119.9 | P1—O1—H1 | 120 (2) |
| C22—C21—P1 | 114.11 (12) | O2—P1—O1 | 114.73 (8) |
| C22—C21—H21A | 108.7 | O2—P1—C11 | 109.11 (8) |
| P1—C21—H21A | 108.7 | O1—P1—C11 | 106.16 (8) |
| C22—C21—H21B | 108.7 | O2—P1—C21 | 109.93 (9) |
| P1—C21—H21B | 108.7 | O1—P1—C21 | 107.28 (8) |
| H21A—C21—H21B | 107.6 | C11—P1—C21 | 109.49 (9) |
| C23—C22—C27 | 118.5 (2) | ||
| C16—C11—C12—C13 | 1.6 (3) | C24—C25—C26—C27 | 1.1 (4) |
| P1—C11—C12—C13 | −177.83 (16) | C25—C26—C27—C22 | −1.1 (4) |
| C11—C12—C13—C14 | −1.6 (3) | C23—C22—C27—C26 | 0.7 (3) |
| C12—C13—C14—C15 | 0.7 (4) | C21—C22—C27—C26 | −179.8 (2) |
| C13—C14—C15—C16 | 0.1 (4) | C16—C11—P1—O2 | −22.31 (17) |
| C14—C15—C16—C11 | −0.1 (3) | C12—C11—P1—O2 | 157.10 (14) |
| C12—C11—C16—C15 | −0.7 (3) | C16—C11—P1—O1 | −146.45 (15) |
| P1—C11—C16—C15 | 178.69 (17) | C12—C11—P1—O1 | 32.96 (17) |
| P1—C21—C22—C23 | 102.5 (2) | C16—C11—P1—C21 | 98.04 (16) |
| P1—C21—C22—C27 | −77.0 (2) | C12—C11—P1—C21 | −82.55 (16) |
| C27—C22—C23—C24 | −0.2 (3) | C22—C21—P1—O2 | 54.98 (17) |
| C21—C22—C23—C24 | −179.8 (2) | C22—C21—P1—O1 | −179.66 (14) |
| C22—C23—C24—C25 | 0.2 (4) | C22—C21—P1—C11 | −64.87 (17) |
| C23—C24—C25—C26 | −0.6 (4) |
| H··· | ||||
| O1—H1···O2i | 0.93 (3) | 1.58 (3) | 2.4838 (18) | 163 (3) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O1—H1⋯O2i | 0.93 (3) | 1.58 (3) | 2.4838 (18) | 163 (3) |
Symmetry code: (i) .